Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010869.1-P | Field mustard | nucleus | 98.09 | 98.28 |
| CDY35748 | Canola | nucleus | 91.42 | 92.89 |
| CDY65661 | Canola | nucleus | 82.26 | 77.39 |
| CDY34099 | Canola | nucleus | 81.75 | 77.24 |
| AT1G28420.1 | Thale cress | nucleus | 79.53 | 73.37 |
| KRH21359 | Soybean | nucleus | 48.51 | 43.48 |
| KRH20389 | Soybean | nucleus | 48.38 | 42.37 |
| KRH50116 | Soybean | nucleus | 47.81 | 42.2 |
| Solyc02g077660.2.1 | Tomato | nucleus | 43.87 | 41.12 |
| Os05t0562400-01 | Rice | nucleus | 35.98 | 40.52 |
| Zm00001d043915_P002 | Maize | nucleus | 32.61 | 40.36 |
| CDY22305 | Canola | nucleus | 39.73 | 38.13 |
| GSMUA_Achr9P06610_001 | Banana | nucleus | 42.78 | 37.96 |
| VIT_10s0003g00270.t01 | Wine grape | nucleus | 26.76 | 37.56 |
| CDX94760 | Canola | nucleus | 39.54 | 37.33 |
| Zm00001d039002_P019 | Maize | nucleus, plastid | 42.53 | 36.52 |
| KXG33081 | Sorghum | nucleus | 42.53 | 36.32 |
| GSMUA_Achr8P27210_001 | Banana | nucleus | 43.99 | 36.25 |
| KXG33083 | Sorghum | nucleus | 41.89 | 36.15 |
| TraesCS3D01G245800.2 | Wheat | nucleus | 42.53 | 36.06 |
| HORVU3Hr1G061660.1 | Barley | nucleus | 42.28 | 36.06 |
| TraesCS3A01G245700.2 | Wheat | nucleus | 42.47 | 36.03 |
| TraesCS3B01G273900.1 | Wheat | nucleus | 42.34 | 36.0 |
| HORVU1Hr1G087180.1 | Barley | nucleus | 41.96 | 35.54 |
| Zm00001d009562_P007 | Maize | nucleus, plastid | 42.34 | 35.48 |
| TraesCS1D01G403700.1 | Wheat | nucleus | 41.7 | 35.42 |
| TraesCS1B01G424100.1 | Wheat | nucleus | 41.64 | 35.16 |
| TraesCS1A01G395600.1 | Wheat | nucleus | 41.51 | 35.13 |
| Zm00001d011560_P012 | Maize | nucleus | 40.94 | 34.61 |
| GSMUA_Achr6P26980_001 | Banana | nucleus | 43.42 | 30.44 |
| CDX89461 | Canola | cytosol, endoplasmic reticulum | 7.95 | 25.93 |
| Zm00001d043914_P001 | Maize | nucleus | 8.84 | 24.69 |
| OQU75646 | Sorghum | cytosol | 8.84 | 24.09 |
| CDY51255 | Canola | nucleus | 15.45 | 23.28 |
| CDY60841 | Canola | nucleus | 15.38 | 23.22 |
| CDY22114 | Canola | nucleus | 6.68 | 22.11 |
| CDY21949 | Canola | nucleus | 6.61 | 21.71 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.7 | GO:A0A078DNS5 | EnsemblPlants:CDX90154 | ProteinID:CDX90154 | ProteinID:CDX90154.1 |
| ncoils:Coil | InterPro:DDT_dom | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00150691001 | InterPro:HB1/Asxl_HTH | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 |
| InterPro:IPR018501 | PFAM:PF00046 | PFAM:PF02791 | PFAM:PF05066 | PFAM:PF15612 | PFAM:PF15613 |
| PFscan:PS50071 | PFscan:PS50827 | PANTHER:PTHR36968 | PANTHER:PTHR36968:SF6 | SMART:SM00389 | SMART:SM00571 |
| SUPFAM:SSF46689 | UniParc:UPI0004EEDE2C | InterPro:WHIM1_dom | InterPro:WHIM2_dom | SEG:seg | : |
Description
BnaA08g18300D
Coordinates
chrLK031862:+:367579..374323
Molecular Weight (calculated)
177291.0 Da
IEP (calculated)
5.044
GRAVY (calculated)
-0.780
Length
1573 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEMGSDEEDQ IKNVNVGDVN KNKKKKIDTF NNKDSLSSKS KRQMKTPFQL QTLEEVYAEE TYPSEATRAE LSEKLDLSDR QLQMWFCHRR LKDKKDGQAK
0101: KPFQPAATPA LSSVNELPAA DDRSGSGSGS GCSPYSESRR NFESGSGSSG ADLGEYEKGG YEPPRLSVMV RRAVVCVEAQ LGEPLREDGP VLGMEFDLLP
0201: PGAFGTPIAM QTHQGHLYES KMYEPHDVRP PRSAARSFHE QQSLDDPSSY TPEINGRYSE SHARGMDYET SRSKSSSFMH GNGPVPRPYG THGNASLNGS
0301: TSQQDMSSPI VPSAHGDSFL LERKVNDGRV GRGSGQKDPE KLEIQRKKYQ ERMRKEMERH ERERRKEEER LMRERIKEEE KLQREQRREM ERREKFLQRE
0401: NERAEKQKQK DEIRRERDAI RRKIAIEKAT ARRIARESMD LIEDEQLELM DLAAASKGLP SVLQLDHDTL QNLELYRDSL SAFPPKALQL KMPFTISPWK
0501: DSEENVGNLL MVWRFLISFS DVLDLWPFTL DEFIQAFHDY DSRLLGEIHI TLLRSIIRDI EDVARTPYSG IGNNQYTTAN PEGGHPQIVE GAYAWGFDIR
0601: SWKNHLNPLT WPEILRQLAL SSGFGPKLKN KSSHVTQTAH KNEAKDCEDI ISTIRSGSAA ESAFASMLEK GLLAPRKSRH RLTPGTVKFA ALHVLSLEGS
0701: KGLTLIELAD KIQKSGLRDL STSKTPEASI SVALTRDVKL FERIAPCTYC VRAPYVKDPA DGDAILADAR KKIKAFENGL TGPEDLNDLE RDEDFECDVD
0801: EDPEVDDLAT PARASNGLSG KGEDAMFCDV KADAKSIVPQ YHSKDSAVSC VDDNNDVVED SNKGQSWIQG LTEGDYCHLS VEERLEALVT LVGIVNEGNS
0901: LRASLEDRME AANSLKKQMW AEAQLDNSCM RDVLKLDRDP SQRMDESKPM EAVSNDLHKG FSNQEATQEN CSSKRSRSQL KSYIGDKAEE VYPYRSLPLG
1001: QDRRRNRYWH FAASASKTDP CSGLIFVELH DGKWRLIDSE EAFDFLVASL DMRGIRESHL RIMLLKIEGS FKENAYKAKS VVNHSPADSV SPSSAIFGSN
1101: SDSMEASTSI RVELGRNDRE KESLSKRFHD FQRWMWTETY SSLPSCARKH GKKRCELLAT CEVCVASYLS EYTHCTSCHR RLSMFDSSER KILDSALTAS
1201: PLPFGARLLK ALLVFLEACV PDEALESFWT ENKRKDWGFR LNASSSPEEL LQVLTSLDSA IKKESLSSSF VSAKELSGAA DDSGSVDVFP WIPKTISAVA
1301: LRLLDLDAFI IYVKPEKPEL ISEDDKEQIS LFPGKSLIKG KGAKEQEDQD EVIVSNSGKK SKKRRVRFGR VSNRNVKRKK VQESPDRFVA GRSDVSVDRN
1401: LGSVALNHHQ VPGRGKRTVR KRPERNDEDN YRLVSRMADI VRPNSEDVEE EEEDEQTFRD INEDWASETP REMEVMTPMQ VDDESDNSVG VESEDDDEGQ
1501: FVVYDQRNKW GLDWNSNPNE AMEDDEEVVG AVQVEREDVA EMSESSEDDD VPANNAAANN FESGSEDYSS SDS
0101: KPFQPAATPA LSSVNELPAA DDRSGSGSGS GCSPYSESRR NFESGSGSSG ADLGEYEKGG YEPPRLSVMV RRAVVCVEAQ LGEPLREDGP VLGMEFDLLP
0201: PGAFGTPIAM QTHQGHLYES KMYEPHDVRP PRSAARSFHE QQSLDDPSSY TPEINGRYSE SHARGMDYET SRSKSSSFMH GNGPVPRPYG THGNASLNGS
0301: TSQQDMSSPI VPSAHGDSFL LERKVNDGRV GRGSGQKDPE KLEIQRKKYQ ERMRKEMERH ERERRKEEER LMRERIKEEE KLQREQRREM ERREKFLQRE
0401: NERAEKQKQK DEIRRERDAI RRKIAIEKAT ARRIARESMD LIEDEQLELM DLAAASKGLP SVLQLDHDTL QNLELYRDSL SAFPPKALQL KMPFTISPWK
0501: DSEENVGNLL MVWRFLISFS DVLDLWPFTL DEFIQAFHDY DSRLLGEIHI TLLRSIIRDI EDVARTPYSG IGNNQYTTAN PEGGHPQIVE GAYAWGFDIR
0601: SWKNHLNPLT WPEILRQLAL SSGFGPKLKN KSSHVTQTAH KNEAKDCEDI ISTIRSGSAA ESAFASMLEK GLLAPRKSRH RLTPGTVKFA ALHVLSLEGS
0701: KGLTLIELAD KIQKSGLRDL STSKTPEASI SVALTRDVKL FERIAPCTYC VRAPYVKDPA DGDAILADAR KKIKAFENGL TGPEDLNDLE RDEDFECDVD
0801: EDPEVDDLAT PARASNGLSG KGEDAMFCDV KADAKSIVPQ YHSKDSAVSC VDDNNDVVED SNKGQSWIQG LTEGDYCHLS VEERLEALVT LVGIVNEGNS
0901: LRASLEDRME AANSLKKQMW AEAQLDNSCM RDVLKLDRDP SQRMDESKPM EAVSNDLHKG FSNQEATQEN CSSKRSRSQL KSYIGDKAEE VYPYRSLPLG
1001: QDRRRNRYWH FAASASKTDP CSGLIFVELH DGKWRLIDSE EAFDFLVASL DMRGIRESHL RIMLLKIEGS FKENAYKAKS VVNHSPADSV SPSSAIFGSN
1101: SDSMEASTSI RVELGRNDRE KESLSKRFHD FQRWMWTETY SSLPSCARKH GKKRCELLAT CEVCVASYLS EYTHCTSCHR RLSMFDSSER KILDSALTAS
1201: PLPFGARLLK ALLVFLEACV PDEALESFWT ENKRKDWGFR LNASSSPEEL LQVLTSLDSA IKKESLSSSF VSAKELSGAA DDSGSVDVFP WIPKTISAVA
1301: LRLLDLDAFI IYVKPEKPEL ISEDDKEQIS LFPGKSLIKG KGAKEQEDQD EVIVSNSGKK SKKRRVRFGR VSNRNVKRKK VQESPDRFVA GRSDVSVDRN
1401: LGSVALNHHQ VPGRGKRTVR KRPERNDEDN YRLVSRMADI VRPNSEDVEE EEEDEQTFRD INEDWASETP REMEVMTPMQ VDDESDNSVG VESEDDDEGQ
1501: FVVYDQRNKW GLDWNSNPNE AMEDDEEVVG AVQVEREDVA EMSESSEDDD VPANNAAANN FESGSEDYSS SDS
0001: MEMGSDGEDQ KIRSVVGDAN LNNKKKKIDN NSSSKDGRVK PKRQMKTPFQ LETLEKVYSE EKYPSEATRA ELSEKLDLSD RQLQMWFCHR RLKDKKDGQS
0101: NKPVKSSVAA VQSASVNELP AAAGSVPEQD SRSDSGSESG CSPYSNSRRN FASGSSSSRA ELDEYETMGK PSYESRLSTM VHRAIVCIEA QLGEPLRDDG
0201: PILGMEFDPL PPGAFGTPIA MQKHLLHPYE SDLYERHDPR PRRSHAAARS FHEQQSLDDP SSFTPNMYER YSENHARGMD YEVARSRISS FMHANGPVPR
0301: SYVTPGHASR NCSTSQQDMP SPIESAHHGD RFLLEKDSSV LGTEDPYLLP DGVRKSSDVH RKGKINDGRL GRGSETRENH GPKDLEKLEI QRKKNEERMR
0401: KEMERNERER RKEEERLMRE RIKEEERLQR EQRREVERRE KFLQRENERA EKKKQKDEIR REKDAIRRKL AIEKATARRI AKESMDLIED EQLELMELAA
0501: ISKGLPSVLQ LDHDTLQNLE VYRDSLSTFP PKSLQLKMPF AISPWKDSDE TVGNLLMVWR FLISFSDVLD LWPFTLDEFI QAFHDYDSRL LGEIHVTLLR
0601: SIIRDVEDVA RTPFSGIGNN QYTTANPEGG HPQIVEGAYA WGFDIRSWKK HLNPLTWPEI LRQLALSAGF GPKLKKKHSR LTNTGDKDEA KGCEDVISTI
0701: RNGTAAESAF ASMREKGLLA PRKSRHRLTP GTVKFAAFHV LSLEGSKGLT VLELADKIQK SGLRDLTTSK TPEASISVAL TRDVKLFERI APSTYCVRAP
0801: YVKDPKDGEA ILADARKKIR AFENGFTGPE DVNDLERDED FEIDIDEDPE VDDLATLASA SKSAVLGEAN VLSGKGVDTM FCDVKADVKS ELEKEFSSPP
0901: PSTMKSIVPQ HSERHKNTVV GGVDAVIDES NQGQSWIQGL TEGDYCHLSV EERLNALVAL VGIANEGNSI RTGLEDRMEA ANALKKQMWA EAQLDNSCMR
1001: DVLKLDLQNL ASSKTESTIG LPIIQSSTRE RDSFDRDPSQ LLDETKPLED LSNDLHKSSA ERALINQDAN ISQENYASKR SRSQLKSYIG HKAEEVYPYR
1101: SLPLGQDRRH NRYWHFAVSV SKSDPCSRLL FVELHDGKWL LIDSEEAFDI LVASLDMRGI RESHLRIMLQ KIEGSFKENA CKDIKLARNP FLTEKSVVNH
1201: SPTDSVSPSS SAISGSNSDS METSTSIRVD LGRNDTENKN LSKRFHDFQR WMWTETYSSL PSCARKYGKK RSELLATCDA CVASYLSEYT FCSSCHQRLD
1301: VVDSSEILDS GLAVSPLPFG VRLLKPLLVF LEASVPDEAL ESFWTEDQRK KWGFRLNTSS SPGELLQVLT SLESAIKKES LSSNFMSAKE LLGAANAEAD
1401: DQGSVDVLPW IPKTVSAVAL RLSELDASII YVKPEKPEVI PEDENEQISL FPRDSPFKGK GPREQEDQDE VAPNPGNRNK KRARVSLGSG SNRKVKRKKA
1501: QSGLNKFVVG RRNVAVNSNL MAVELNHQVP GKGKRTVRKR PERIDEDNSH LVNRMANIVR PKSEEVEEDE EEEEQTFRDI NEDWAAGETP REMEEDWANE
1601: TPNRMMTPMQ VDDESDNSVG VESEDEDGGG QFVDYSQRNK WGLDWNSNLN VAIEEDEEEE VVGVGRVEGE DDAEMSESSE DDDVPANNAA NNYDRESEGY
1701: SSSDS
0101: NKPVKSSVAA VQSASVNELP AAAGSVPEQD SRSDSGSESG CSPYSNSRRN FASGSSSSRA ELDEYETMGK PSYESRLSTM VHRAIVCIEA QLGEPLRDDG
0201: PILGMEFDPL PPGAFGTPIA MQKHLLHPYE SDLYERHDPR PRRSHAAARS FHEQQSLDDP SSFTPNMYER YSENHARGMD YEVARSRISS FMHANGPVPR
0301: SYVTPGHASR NCSTSQQDMP SPIESAHHGD RFLLEKDSSV LGTEDPYLLP DGVRKSSDVH RKGKINDGRL GRGSETRENH GPKDLEKLEI QRKKNEERMR
0401: KEMERNERER RKEEERLMRE RIKEEERLQR EQRREVERRE KFLQRENERA EKKKQKDEIR REKDAIRRKL AIEKATARRI AKESMDLIED EQLELMELAA
0501: ISKGLPSVLQ LDHDTLQNLE VYRDSLSTFP PKSLQLKMPF AISPWKDSDE TVGNLLMVWR FLISFSDVLD LWPFTLDEFI QAFHDYDSRL LGEIHVTLLR
0601: SIIRDVEDVA RTPFSGIGNN QYTTANPEGG HPQIVEGAYA WGFDIRSWKK HLNPLTWPEI LRQLALSAGF GPKLKKKHSR LTNTGDKDEA KGCEDVISTI
0701: RNGTAAESAF ASMREKGLLA PRKSRHRLTP GTVKFAAFHV LSLEGSKGLT VLELADKIQK SGLRDLTTSK TPEASISVAL TRDVKLFERI APSTYCVRAP
0801: YVKDPKDGEA ILADARKKIR AFENGFTGPE DVNDLERDED FEIDIDEDPE VDDLATLASA SKSAVLGEAN VLSGKGVDTM FCDVKADVKS ELEKEFSSPP
0901: PSTMKSIVPQ HSERHKNTVV GGVDAVIDES NQGQSWIQGL TEGDYCHLSV EERLNALVAL VGIANEGNSI RTGLEDRMEA ANALKKQMWA EAQLDNSCMR
1001: DVLKLDLQNL ASSKTESTIG LPIIQSSTRE RDSFDRDPSQ LLDETKPLED LSNDLHKSSA ERALINQDAN ISQENYASKR SRSQLKSYIG HKAEEVYPYR
1101: SLPLGQDRRH NRYWHFAVSV SKSDPCSRLL FVELHDGKWL LIDSEEAFDI LVASLDMRGI RESHLRIMLQ KIEGSFKENA CKDIKLARNP FLTEKSVVNH
1201: SPTDSVSPSS SAISGSNSDS METSTSIRVD LGRNDTENKN LSKRFHDFQR WMWTETYSSL PSCARKYGKK RSELLATCDA CVASYLSEYT FCSSCHQRLD
1301: VVDSSEILDS GLAVSPLPFG VRLLKPLLVF LEASVPDEAL ESFWTEDQRK KWGFRLNTSS SPGELLQVLT SLESAIKKES LSSNFMSAKE LLGAANAEAD
1401: DQGSVDVLPW IPKTVSAVAL RLSELDASII YVKPEKPEVI PEDENEQISL FPRDSPFKGK GPREQEDQDE VAPNPGNRNK KRARVSLGSG SNRKVKRKKA
1501: QSGLNKFVVG RRNVAVNSNL MAVELNHQVP GKGKRTVRKR PERIDEDNSH LVNRMANIVR PKSEEVEEDE EEEEQTFRDI NEDWAAGETP REMEEDWANE
1601: TPNRMMTPMQ VDDESDNSVG VESEDEDGGG QFVDYSQRNK WGLDWNSNLN VAIEEDEEEE VVGVGRVEGE DDAEMSESSE DDDVPANNAA NNYDRESEGY
1701: SSSDS
Arabidopsis Description
RLT1Homeobox-DDT domain protein RLT1 [Source:UniProtKB/Swiss-Prot;Acc:F4HY56]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.