Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90154 | Canola | nucleus | 92.89 | 91.42 |
| CDY65661 | Canola | nucleus | 82.3 | 76.2 |
| CDY34099 | Canola | nucleus | 81.85 | 76.1 |
| AT1G28420.1 | Thale cress | nucleus | 79.97 | 72.61 |
| KRH21359 | Soybean | nucleus | 48.77 | 43.02 |
| KRH20389 | Soybean | nucleus | 48.77 | 42.04 |
| KRH50116 | Soybean | nucleus | 48.0 | 41.69 |
| Solyc02g077660.2.1 | Tomato | nucleus | 44.57 | 41.12 |
| Os05t0562400-01 | Rice | nucleus | 36.69 | 40.66 |
| Zm00001d043915_P002 | Maize | nucleus | 32.88 | 40.05 |
| CDY22305 | Canola | nucleus | 40.44 | 38.19 |
| GSMUA_Achr9P06610_001 | Banana | nucleus | 43.22 | 37.73 |
| CDX94760 | Canola | nucleus | 40.25 | 37.4 |
| VIT_10s0003g00270.t01 | Wine grape | nucleus | 26.94 | 37.2 |
| GSMUA_Achr8P27210_001 | Banana | nucleus | 44.64 | 36.2 |
| Zm00001d039002_P019 | Maize | nucleus, plastid | 42.83 | 36.19 |
| KXG33081 | Sorghum | nucleus | 42.89 | 36.05 |
| KXG33083 | Sorghum | nucleus | 42.25 | 35.87 |
| HORVU3Hr1G061660.1 | Barley | nucleus | 42.7 | 35.85 |
| TraesCS3D01G245800.2 | Wheat | nucleus | 42.89 | 35.8 |
| TraesCS3A01G245700.2 | Wheat | nucleus | 42.76 | 35.71 |
| TraesCS3B01G273900.1 | Wheat | nucleus | 42.64 | 35.68 |
| HORVU1Hr1G087180.1 | Barley | nucleus | 42.7 | 35.59 |
| TraesCS1D01G403700.1 | Wheat | nucleus | 42.57 | 35.58 |
| Zm00001d009562_P007 | Maize | nucleus, plastid | 42.83 | 35.32 |
| TraesCS1B01G424100.1 | Wheat | nucleus | 42.51 | 35.32 |
| TraesCS1A01G395600.1 | Wheat | nucleus | 42.38 | 35.29 |
| Zm00001d011560_P012 | Maize | nucleus | 41.21 | 34.28 |
| GSMUA_Achr6P26980_001 | Banana | nucleus | 44.12 | 30.44 |
| CDX89461 | Canola | cytosol, endoplasmic reticulum | 8.01 | 25.73 |
| Zm00001d043914_P001 | Maize | nucleus | 8.91 | 24.51 |
| OQU75646 | Sorghum | cytosol | 8.91 | 23.92 |
| CDY51255 | Canola | nucleus | 15.63 | 23.18 |
| CDY60841 | Canola | nucleus | 15.57 | 23.13 |
| CDY22114 | Canola | nucleus | 6.72 | 21.89 |
| CDY21949 | Canola | nucleus | 6.59 | 21.29 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.7 | GO:A0A078HG02 | UniProt:A0A078HG02 | EnsemblPlants:CDY35748 | ProteinID:CDY35748 |
| ProteinID:CDY35748.1 | ncoils:Coil | InterPro:DDT_dom | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:GSBRNA2T00059191001 | InterPro:HB1/Asxl_HTH | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR018501 |
| PFAM:PF00046 | PFAM:PF02791 | PFAM:PF05066 | PFAM:PF15612 | PFAM:PF15613 | PFscan:PS50071 |
| PFscan:PS50827 | PANTHER:PTHR36968 | PANTHER:PTHR36968:SF6 | SMART:SM00389 | SMART:SM00571 | SUPFAM:SSF46689 |
| UniParc:UPI0004EF30F3 | InterPro:WHIM1_dom | InterPro:WHIM2_dom | SEG:seg | : | : |
Description
BnaC03g58690DBnaC03g58690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HG02]
Coordinates
chrLK032359:+:317739..324336
Molecular Weight (calculated)
174796.0 Da
IEP (calculated)
5.068
GRAVY (calculated)
-0.791
Length
1548 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEMGSDEEDQ IKNVVDGHKN KKKKIDTFNN KDSLTSKSKR QMKTPFQLQT LEKVYAEETY PSEATRAELS EKLDLSDRQL QMWFCHRRLK DKKDGQAKKP
0101: VQPAAPVLSS VNELPAAKSV PELDSGSGCS PYSESRMNFA SGSGSSGADL GEYEKGGYEP PRLSVMVRRA VVCVEAQLGE PLREDGPVLG MEFDQLPPGA
0201: FGTPIAMEKH QGLPYESKMY EPHDVRPRRS AARSLDDPSS YTPEINGRYS ESHARGMDYE TSRSKNSSYM HGNGPYGTRG NASLNCSTSQ QDMPSPIAPS
0301: AHGDISLLER KVNDGRVGRG SGQKDPEKLE IQKKKYEERT RKEMERHERE RRKEEERLMR ERIKEEEKLQ REHRREMERR EKFLQRENER AEKQKQKDEI
0401: RRERDAIRRK IAIEKATARR IARESMDLIE DEQLELMDLA AASKGLPSVL QLDHDTLQNL ELYRDSLSSF PPKALQLKMP FTISPWKDSE ENVANLLMVW
0501: RFLISFSDVL DLWPFTLDEF IQAFHDYDSR LLGEIHITLL RSIIRDIEDV ARTRYSGIGN NQYTTANPEG GHPQIVEGAY AWGFDIRSWK NHLNPLTWPE
0601: ILRQLALSSG FGPKLKKKNS HVTQTAHKDE AKGYEDIVST IRSGSAAESA FASMLEKGLL APRKSRHRLT PGTVKFAALH VLSLEGSKGL TLIELADKIQ
0701: KSGLRDLSTS KTPEASISVA LTRDVKLFER IAPCTYCVRA PYVKDPADGE AILADARKKI RAFENGLTGP EDLNDLERDE DFECDVDEDP EVDDLATPAR
0801: ASNGLSGKRE DAMFCDVKSI VPQHHSKDSA VSCVDDNNDV VEDSNQGQSW IQGLTEGDYC HLSVEERLEA LVALVGIVNE GNSLRASLED RMEAANSLKK
0901: QMLAEAQLDN SCMRDVLKLD RDPSQRMDES KPMEAERGFS NQEAAQENCS SKRSRSQLKS YIGDKAEEVY PYRSLPLGQD RRRNRYWHFA ASASKTDPCS
1001: GLIFVELHDG KWRLIDSEEA FDFLVASLDM RGIRESHLGI MLLKIEGSFK ENACKNTRAD SVSPSSAISG SNSDSMEAST SIRVELGRND REKECLSKRF
1101: HGFQRWMWTE TYSSLPSCAR RHGKKRCELL ATCEVCVASY LSEYTHCTSC HRRLNMFYSS ERKILDSALT ASPLPFGVRL LKALLVFLEA CVPDEALESF
1201: WTEDKRKDWG FRLNDSSSPE ELLQVLISLE SAIKKESLSS NFVTAKELLG AADGSGSMDV FPWIPKTVSA VALRLLDLDA SILYVKPEKP EQISEDDKEQ
1301: ISLFPGKSLT KGKGAKEQED QDEVVVSNSG KKSKKRRVRF GSVTNRKAKR TKVQGGPNRF VAGRSNVVMD RNLVGVELNH HQVPGRGKRT VRKRPERNDE
1401: DSYRLVRRMA DIVRPNSEEV EEEEEEEEEE QTFRDINEDW ASETPDRVMM PMQVDDESDN NVGVESEDDD DEGQFVVYDQ RNKWGLDWNS NLNEAMEDDE
1501: EEVVGAAQVE REDVAEMSEG SEDDDVPANN AAANNYESGS EDYSSSDS
0101: VQPAAPVLSS VNELPAAKSV PELDSGSGCS PYSESRMNFA SGSGSSGADL GEYEKGGYEP PRLSVMVRRA VVCVEAQLGE PLREDGPVLG MEFDQLPPGA
0201: FGTPIAMEKH QGLPYESKMY EPHDVRPRRS AARSLDDPSS YTPEINGRYS ESHARGMDYE TSRSKNSSYM HGNGPYGTRG NASLNCSTSQ QDMPSPIAPS
0301: AHGDISLLER KVNDGRVGRG SGQKDPEKLE IQKKKYEERT RKEMERHERE RRKEEERLMR ERIKEEEKLQ REHRREMERR EKFLQRENER AEKQKQKDEI
0401: RRERDAIRRK IAIEKATARR IARESMDLIE DEQLELMDLA AASKGLPSVL QLDHDTLQNL ELYRDSLSSF PPKALQLKMP FTISPWKDSE ENVANLLMVW
0501: RFLISFSDVL DLWPFTLDEF IQAFHDYDSR LLGEIHITLL RSIIRDIEDV ARTRYSGIGN NQYTTANPEG GHPQIVEGAY AWGFDIRSWK NHLNPLTWPE
0601: ILRQLALSSG FGPKLKKKNS HVTQTAHKDE AKGYEDIVST IRSGSAAESA FASMLEKGLL APRKSRHRLT PGTVKFAALH VLSLEGSKGL TLIELADKIQ
0701: KSGLRDLSTS KTPEASISVA LTRDVKLFER IAPCTYCVRA PYVKDPADGE AILADARKKI RAFENGLTGP EDLNDLERDE DFECDVDEDP EVDDLATPAR
0801: ASNGLSGKRE DAMFCDVKSI VPQHHSKDSA VSCVDDNNDV VEDSNQGQSW IQGLTEGDYC HLSVEERLEA LVALVGIVNE GNSLRASLED RMEAANSLKK
0901: QMLAEAQLDN SCMRDVLKLD RDPSQRMDES KPMEAERGFS NQEAAQENCS SKRSRSQLKS YIGDKAEEVY PYRSLPLGQD RRRNRYWHFA ASASKTDPCS
1001: GLIFVELHDG KWRLIDSEEA FDFLVASLDM RGIRESHLGI MLLKIEGSFK ENACKNTRAD SVSPSSAISG SNSDSMEAST SIRVELGRND REKECLSKRF
1101: HGFQRWMWTE TYSSLPSCAR RHGKKRCELL ATCEVCVASY LSEYTHCTSC HRRLNMFYSS ERKILDSALT ASPLPFGVRL LKALLVFLEA CVPDEALESF
1201: WTEDKRKDWG FRLNDSSSPE ELLQVLISLE SAIKKESLSS NFVTAKELLG AADGSGSMDV FPWIPKTVSA VALRLLDLDA SILYVKPEKP EQISEDDKEQ
1301: ISLFPGKSLT KGKGAKEQED QDEVVVSNSG KKSKKRRVRF GSVTNRKAKR TKVQGGPNRF VAGRSNVVMD RNLVGVELNH HQVPGRGKRT VRKRPERNDE
1401: DSYRLVRRMA DIVRPNSEEV EEEEEEEEEE QTFRDINEDW ASETPDRVMM PMQVDDESDN NVGVESEDDD DEGQFVVYDQ RNKWGLDWNS NLNEAMEDDE
1501: EEVVGAAQVE REDVAEMSEG SEDDDVPANN AAANNYESGS EDYSSSDS
0001: MEMGSDGEDQ KIRSVVGDAN LNNKKKKIDN NSSSKDGRVK PKRQMKTPFQ LETLEKVYSE EKYPSEATRA ELSEKLDLSD RQLQMWFCHR RLKDKKDGQS
0101: NKPVKSSVAA VQSASVNELP AAAGSVPEQD SRSDSGSESG CSPYSNSRRN FASGSSSSRA ELDEYETMGK PSYESRLSTM VHRAIVCIEA QLGEPLRDDG
0201: PILGMEFDPL PPGAFGTPIA MQKHLLHPYE SDLYERHDPR PRRSHAAARS FHEQQSLDDP SSFTPNMYER YSENHARGMD YEVARSRISS FMHANGPVPR
0301: SYVTPGHASR NCSTSQQDMP SPIESAHHGD RFLLEKDSSV LGTEDPYLLP DGVRKSSDVH RKGKINDGRL GRGSETRENH GPKDLEKLEI QRKKNEERMR
0401: KEMERNERER RKEEERLMRE RIKEEERLQR EQRREVERRE KFLQRENERA EKKKQKDEIR REKDAIRRKL AIEKATARRI AKESMDLIED EQLELMELAA
0501: ISKGLPSVLQ LDHDTLQNLE VYRDSLSTFP PKSLQLKMPF AISPWKDSDE TVGNLLMVWR FLISFSDVLD LWPFTLDEFI QAFHDYDSRL LGEIHVTLLR
0601: SIIRDVEDVA RTPFSGIGNN QYTTANPEGG HPQIVEGAYA WGFDIRSWKK HLNPLTWPEI LRQLALSAGF GPKLKKKHSR LTNTGDKDEA KGCEDVISTI
0701: RNGTAAESAF ASMREKGLLA PRKSRHRLTP GTVKFAAFHV LSLEGSKGLT VLELADKIQK SGLRDLTTSK TPEASISVAL TRDVKLFERI APSTYCVRAP
0801: YVKDPKDGEA ILADARKKIR AFENGFTGPE DVNDLERDED FEIDIDEDPE VDDLATLASA SKSAVLGEAN VLSGKGVDTM FCDVKADVKS ELEKEFSSPP
0901: PSTMKSIVPQ HSERHKNTVV GGVDAVIDES NQGQSWIQGL TEGDYCHLSV EERLNALVAL VGIANEGNSI RTGLEDRMEA ANALKKQMWA EAQLDNSCMR
1001: DVLKLDLQNL ASSKTESTIG LPIIQSSTRE RDSFDRDPSQ LLDETKPLED LSNDLHKSSA ERALINQDAN ISQENYASKR SRSQLKSYIG HKAEEVYPYR
1101: SLPLGQDRRH NRYWHFAVSV SKSDPCSRLL FVELHDGKWL LIDSEEAFDI LVASLDMRGI RESHLRIMLQ KIEGSFKENA CKDIKLARNP FLTEKSVVNH
1201: SPTDSVSPSS SAISGSNSDS METSTSIRVD LGRNDTENKN LSKRFHDFQR WMWTETYSSL PSCARKYGKK RSELLATCDA CVASYLSEYT FCSSCHQRLD
1301: VVDSSEILDS GLAVSPLPFG VRLLKPLLVF LEASVPDEAL ESFWTEDQRK KWGFRLNTSS SPGELLQVLT SLESAIKKES LSSNFMSAKE LLGAANAEAD
1401: DQGSVDVLPW IPKTVSAVAL RLSELDASII YVKPEKPEVI PEDENEQISL FPRDSPFKGK GPREQEDQDE VAPNPGNRNK KRARVSLGSG SNRKVKRKKA
1501: QSGLNKFVVG RRNVAVNSNL MAVELNHQVP GKGKRTVRKR PERIDEDNSH LVNRMANIVR PKSEEVEEDE EEEEQTFRDI NEDWAAGETP REMEEDWANE
1601: TPNRMMTPMQ VDDESDNSVG VESEDEDGGG QFVDYSQRNK WGLDWNSNLN VAIEEDEEEE VVGVGRVEGE DDAEMSESSE DDDVPANNAA NNYDRESEGY
1701: SSSDS
0101: NKPVKSSVAA VQSASVNELP AAAGSVPEQD SRSDSGSESG CSPYSNSRRN FASGSSSSRA ELDEYETMGK PSYESRLSTM VHRAIVCIEA QLGEPLRDDG
0201: PILGMEFDPL PPGAFGTPIA MQKHLLHPYE SDLYERHDPR PRRSHAAARS FHEQQSLDDP SSFTPNMYER YSENHARGMD YEVARSRISS FMHANGPVPR
0301: SYVTPGHASR NCSTSQQDMP SPIESAHHGD RFLLEKDSSV LGTEDPYLLP DGVRKSSDVH RKGKINDGRL GRGSETRENH GPKDLEKLEI QRKKNEERMR
0401: KEMERNERER RKEEERLMRE RIKEEERLQR EQRREVERRE KFLQRENERA EKKKQKDEIR REKDAIRRKL AIEKATARRI AKESMDLIED EQLELMELAA
0501: ISKGLPSVLQ LDHDTLQNLE VYRDSLSTFP PKSLQLKMPF AISPWKDSDE TVGNLLMVWR FLISFSDVLD LWPFTLDEFI QAFHDYDSRL LGEIHVTLLR
0601: SIIRDVEDVA RTPFSGIGNN QYTTANPEGG HPQIVEGAYA WGFDIRSWKK HLNPLTWPEI LRQLALSAGF GPKLKKKHSR LTNTGDKDEA KGCEDVISTI
0701: RNGTAAESAF ASMREKGLLA PRKSRHRLTP GTVKFAAFHV LSLEGSKGLT VLELADKIQK SGLRDLTTSK TPEASISVAL TRDVKLFERI APSTYCVRAP
0801: YVKDPKDGEA ILADARKKIR AFENGFTGPE DVNDLERDED FEIDIDEDPE VDDLATLASA SKSAVLGEAN VLSGKGVDTM FCDVKADVKS ELEKEFSSPP
0901: PSTMKSIVPQ HSERHKNTVV GGVDAVIDES NQGQSWIQGL TEGDYCHLSV EERLNALVAL VGIANEGNSI RTGLEDRMEA ANALKKQMWA EAQLDNSCMR
1001: DVLKLDLQNL ASSKTESTIG LPIIQSSTRE RDSFDRDPSQ LLDETKPLED LSNDLHKSSA ERALINQDAN ISQENYASKR SRSQLKSYIG HKAEEVYPYR
1101: SLPLGQDRRH NRYWHFAVSV SKSDPCSRLL FVELHDGKWL LIDSEEAFDI LVASLDMRGI RESHLRIMLQ KIEGSFKENA CKDIKLARNP FLTEKSVVNH
1201: SPTDSVSPSS SAISGSNSDS METSTSIRVD LGRNDTENKN LSKRFHDFQR WMWTETYSSL PSCARKYGKK RSELLATCDA CVASYLSEYT FCSSCHQRLD
1301: VVDSSEILDS GLAVSPLPFG VRLLKPLLVF LEASVPDEAL ESFWTEDQRK KWGFRLNTSS SPGELLQVLT SLESAIKKES LSSNFMSAKE LLGAANAEAD
1401: DQGSVDVLPW IPKTVSAVAL RLSELDASII YVKPEKPEVI PEDENEQISL FPRDSPFKGK GPREQEDQDE VAPNPGNRNK KRARVSLGSG SNRKVKRKKA
1501: QSGLNKFVVG RRNVAVNSNL MAVELNHQVP GKGKRTVRKR PERIDEDNSH LVNRMANIVR PKSEEVEEDE EEEEQTFRDI NEDWAAGETP REMEEDWANE
1601: TPNRMMTPMQ VDDESDNSVG VESEDEDGGG QFVDYSQRNK WGLDWNSNLN VAIEEDEEEE VVGVGRVEGE DDAEMSESSE DDDVPANNAA NNYDRESEGY
1701: SSSDS
Arabidopsis Description
RLT1Homeobox-DDT domain protein RLT1 [Source:UniProtKB/Swiss-Prot;Acc:F4HY56]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.