Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY22305 | Canola | nucleus | 94.24 | 95.79 |
| AT5G44180.1 | Thale cress | nucleus | 80.97 | 79.63 |
| VIT_12s0028g03090.t01 | Wine grape | nucleus | 43.7 | 47.77 |
| Zm00001d043915_P002 | Maize | nucleus | 34.57 | 45.32 |
| Solyc07g053610.2.1 | Tomato | nucleus | 45.56 | 42.59 |
| Os05t0562400-01 | Rice | nucleus | 34.63 | 41.3 |
| KRH55891 | Soybean | nucleus | 44.06 | 41.21 |
| CDY35748 | Canola | nucleus | 37.4 | 40.25 |
| GSMUA_Achr9P06610_001 | Banana | nucleus | 42.74 | 40.16 |
| CDX90154 | Canola | nucleus | 37.33 | 39.54 |
| KXG33083 | Sorghum | nucleus | 42.98 | 39.28 |
| KXG33081 | Sorghum | nucleus | 43.16 | 39.03 |
| CDY34099 | Canola | nucleus | 38.72 | 38.74 |
| GSMUA_Achr8P27210_001 | Banana | nucleus | 44.36 | 38.71 |
| HORVU3Hr1G061660.1 | Barley | nucleus | 42.62 | 38.5 |
| CDY65661 | Canola | nucleus | 38.6 | 38.46 |
| Zm00001d011560_P012 | Maize | nucleus | 42.8 | 38.31 |
| TraesCS3A01G245700.2 | Wheat | nucleus | 42.62 | 38.3 |
| TraesCS3D01G245800.2 | Wheat | nucleus | 42.44 | 38.11 |
| TraesCS3B01G273900.1 | Wheat | nucleus | 42.2 | 38.0 |
| Zm00001d039002_P019 | Maize | nucleus, plastid | 41.72 | 37.94 |
| TraesCS1D01G403700.1 | Wheat | nucleus | 41.72 | 37.53 |
| TraesCS1A01G395600.1 | Wheat | nucleus | 41.66 | 37.33 |
| HORVU1Hr1G087180.1 | Barley | nucleus | 41.36 | 37.1 |
| TraesCS1B01G424100.1 | Wheat | nucleus | 41.48 | 37.09 |
| Zm00001d009562_P007 | Maize | nucleus, plastid | 40.82 | 36.23 |
| GSMUA_Achr6P26980_001 | Banana | nucleus | 43.46 | 32.26 |
| Zm00001d043914_P001 | Maize | nucleus | 8.16 | 24.16 |
| CDX89461 | Canola | cytosol, endoplasmic reticulum | 6.96 | 24.07 |
| OQU75646 | Sorghum | cytosol | 8.04 | 23.22 |
| CDY60841 | Canola | nucleus | 14.35 | 22.94 |
| CDY51255 | Canola | nucleus | 14.29 | 22.8 |
| CDY22114 | Canola | nucleus | 5.28 | 18.53 |
| CDY21949 | Canola | nucleus | 5.22 | 18.16 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.7 | GO:A0A078DZH4 | EnsemblPlants:CDX94760 | ProteinID:CDX94760 | ProteinID:CDX94760.1 |
| ncoils:Coil | InterPro:DDT_dom | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00158203001 | InterPro:HB1/Asxl_HTH | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 |
| InterPro:IPR018501 | PFAM:PF00046 | PFAM:PF02791 | PFAM:PF05066 | PFAM:PF15612 | PFAM:PF15613 |
| PFscan:PS50071 | PFscan:PS50827 | PANTHER:PTHR36968 | SMART:SM00389 | SMART:SM00571 | SUPFAM:SSF46689 |
| UniParc:UPI0004EE4BF8 | InterPro:WHIM1_dom | InterPro:WHIM2_dom | SEG:seg | : | : |
Description
BnaC07g17690D
Coordinates
chrLK031884:+:909307..915803
Molecular Weight (calculated)
186910.0 Da
IEP (calculated)
4.991
GRAVY (calculated)
-0.715
Length
1666 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEDGSEGDKN KTPEGAAATE SKSKRKMKTA AQLEVLENTY KAEPYPSEAL RADLSVQLNL SDRQLQMWFC HRRLKDRKSS TPTKRQRKES TPSSAAESSK
0101: QAAAVNAADL VAGNEHNSFP HELDSRRTAR GGGGGGVTVV RRFNEPSPSE VRAIGYVEAQ LGERLREDGP ILGMEFDPLP PGAFGTPIAE MPTHRKAATR
0201: PAFETNLYVR SDVKPLKESV RTIREYQFLP EQPSSRTDHS ERASPASHHY GVPLDASVVM RASSVSGGHR DDYKVSPQIP NLNLSAHHVK PGHVLGEYDS
0301: PYQKSYVDPA LHGNKDPFVK SEREVGIDDD EDDGDDDDDD VLLQLERKRK SEEARIAREV EAHEKRIRKE LERQDMLRRK REEQVRKEME RQDRERRKEE
0401: ERLLRERQRE EERYLKEQMK EMQRREKFLK KETIRAEKMR QKEEMRRVKE IARLKAANER AMARKIAKES MELIEDERLE LMEVAALSLG LPSMIALDFE
0501: ALQNLDAYRD KQVTFPPTSV NLKKPFAVKP WNGSDENIAN LLMVWRFLIN FADVLGLWPF TLDEFTQAFH DHDPRLMGEI HIVLLKTIIK DIEGVARTLS
0601: VGVGANQNAA ANPGGGHPHV VEGAYAWGFD IRSWRKNLNV FTWPEILRQL ALSAGFGPEL KKQDIKTMSV HDESEANNSE NVIFNLRIGA AAENAFAKMQ
0701: EKGLSNLRRS RHRLTPGTVK FAAFHVLSIE GEKGLTILEV AEKIQKSGLR DLTTSRTPEA SVAAALSRDT KLFERVAPST YCVRPSYRKD AGDAETIFAE
0801: ARERIRMFKS GVTDVEDVDE AEREEDSESD VGDDPEVDLN LKKEDLGALE EIGKLTGVEP SLENGKLETE PEANPLTPSL PEESTKDEKI DDILPDQQDA
0901: VANDGDCFDV SKLGEQWVQG LVEGDYSSLS IEERLSALVA LIGIAIEGNT IRISLEERLE VASALKKQMW SEVQLDKRWK EESLIRANYL SYPTPKIQES
1001: PSADVTPISS QDPLSLPQID VAGPSLQSQE NVAGMENLQY HHQQQQSYTA DRERLRAELK AYVGYKAEEL YVYRSLPLGL DRRRNRYWRF SASASRNDPG
1101: CGRIFVELQD GRWRLIDSEV GFDCLVKSLD VRGVRESHLH FMLLKMEASF KEAVRRNVET STGLDLDSDT ADILSTFKIE LGDGERCGVL QRFQSFERWM
1201: WDNMLHPGAL SALKYGAKKS TTLFHICRSC GELHFAVDVC CPGCGQVMMS GGLDVNELCF ADQVARLGED TGFILRGSHL SPLRIRLLKI QLALVEASLP
1301: PEGLQTHWTE SLRKTWGLKL LLSSSPEELH QVLTMLEVAL KRDFLSSNFE TTCELLDLSE EALLRDVKVL PWTPKTTGGV ALRLFELDSS IAYTPDQNKD
1401: PQKDKESEDF VGLETNFLRN VQETDVIEAT PVQVAYAQED TEPGLGRGRP PRGRGRPRSQ RGKKPSPASG KPPRGAANSN GEPMLRPRAQ PRGGRKKGRR
1501: SSGTRTRPTK GTLGISNEVV GVGGGGGGGG RRGKEVNVNA KTNLHGWVET PDDDGEASSS GRSFQYDDDV MAPVDDFGES SKLVGRGEFS LHSDDEYEEE
1601: EEEEEEEDMD TKMNVDDEDE DYINEEDSDG GREQASEMIS MEAAASQRRF PFEDPDLTSS SSSDFQ
0101: QAAAVNAADL VAGNEHNSFP HELDSRRTAR GGGGGGVTVV RRFNEPSPSE VRAIGYVEAQ LGERLREDGP ILGMEFDPLP PGAFGTPIAE MPTHRKAATR
0201: PAFETNLYVR SDVKPLKESV RTIREYQFLP EQPSSRTDHS ERASPASHHY GVPLDASVVM RASSVSGGHR DDYKVSPQIP NLNLSAHHVK PGHVLGEYDS
0301: PYQKSYVDPA LHGNKDPFVK SEREVGIDDD EDDGDDDDDD VLLQLERKRK SEEARIAREV EAHEKRIRKE LERQDMLRRK REEQVRKEME RQDRERRKEE
0401: ERLLRERQRE EERYLKEQMK EMQRREKFLK KETIRAEKMR QKEEMRRVKE IARLKAANER AMARKIAKES MELIEDERLE LMEVAALSLG LPSMIALDFE
0501: ALQNLDAYRD KQVTFPPTSV NLKKPFAVKP WNGSDENIAN LLMVWRFLIN FADVLGLWPF TLDEFTQAFH DHDPRLMGEI HIVLLKTIIK DIEGVARTLS
0601: VGVGANQNAA ANPGGGHPHV VEGAYAWGFD IRSWRKNLNV FTWPEILRQL ALSAGFGPEL KKQDIKTMSV HDESEANNSE NVIFNLRIGA AAENAFAKMQ
0701: EKGLSNLRRS RHRLTPGTVK FAAFHVLSIE GEKGLTILEV AEKIQKSGLR DLTTSRTPEA SVAAALSRDT KLFERVAPST YCVRPSYRKD AGDAETIFAE
0801: ARERIRMFKS GVTDVEDVDE AEREEDSESD VGDDPEVDLN LKKEDLGALE EIGKLTGVEP SLENGKLETE PEANPLTPSL PEESTKDEKI DDILPDQQDA
0901: VANDGDCFDV SKLGEQWVQG LVEGDYSSLS IEERLSALVA LIGIAIEGNT IRISLEERLE VASALKKQMW SEVQLDKRWK EESLIRANYL SYPTPKIQES
1001: PSADVTPISS QDPLSLPQID VAGPSLQSQE NVAGMENLQY HHQQQQSYTA DRERLRAELK AYVGYKAEEL YVYRSLPLGL DRRRNRYWRF SASASRNDPG
1101: CGRIFVELQD GRWRLIDSEV GFDCLVKSLD VRGVRESHLH FMLLKMEASF KEAVRRNVET STGLDLDSDT ADILSTFKIE LGDGERCGVL QRFQSFERWM
1201: WDNMLHPGAL SALKYGAKKS TTLFHICRSC GELHFAVDVC CPGCGQVMMS GGLDVNELCF ADQVARLGED TGFILRGSHL SPLRIRLLKI QLALVEASLP
1301: PEGLQTHWTE SLRKTWGLKL LLSSSPEELH QVLTMLEVAL KRDFLSSNFE TTCELLDLSE EALLRDVKVL PWTPKTTGGV ALRLFELDSS IAYTPDQNKD
1401: PQKDKESEDF VGLETNFLRN VQETDVIEAT PVQVAYAQED TEPGLGRGRP PRGRGRPRSQ RGKKPSPASG KPPRGAANSN GEPMLRPRAQ PRGGRKKGRR
1501: SSGTRTRPTK GTLGISNEVV GVGGGGGGGG RRGKEVNVNA KTNLHGWVET PDDDGEASSS GRSFQYDDDV MAPVDDFGES SKLVGRGEFS LHSDDEYEEE
1601: EEEEEEEDMD TKMNVDDEDE DYINEEDSDG GREQASEMIS MEAAASQRRF PFEDPDLTSS SSSDFQ
0001: MEGGSEKTTP EGCGGESKSK RKMKTAAQLE VLENTYSAEP YPSEAIRADL SVKLNLSDRQ LQMWFCHRRL KERKSTTPSK RQRKELVTPT AMESWEPPVN
0101: AGDLVAGNEL DSRRAARGSG GSGVTVVRRF NEPSSAEVRA IGYVEAQLGE RLRDNGPVLG MEFDPLPPGA FGMPIEMPSH RKATRQAFET NIYVRSDVKP
0201: IKDHVRPIRE YQFIPELPSS RTDHSERVSP SHHFGVPLDG SVMRVSAVSA GHRDDYKISP QIPNLNLATH QGKPGHVYSP NLVEYDSPYQ KSYMDTAAQV
0301: HDDPFVKSER EVGNEDEDDD ALQLERHRKN EEARIAREVE AHEKRIRREL EKQDMLRRKR EEQIRKEMER QDRERRKEEE RLLREKQREE ERYLKEQMRE
0401: LQRREKFLKK ETIRAEKMRQ KEEMRKEKEV ARLKAANERA IARKIAKESM ELIEDERLEL MEVAALTKGL PSMLALDFET LQNLDEYRDK QAIFPPTSVK
0501: LKKPFAVKPW NGSDENVANL LMVWRFLITF ADVLGLWPFT LDEFAQAFHD YDPRLMGEIH IVLLKTIIKD IEGVVRTLST GVGANQNVAA NPGGGHPHVV
0601: EGAYAWGFDI RSWRKNLNVF TWPEILRQLA LSAGLGPQLK KMNIRTVSVH DDNEANNSEN VIFNLRKGVA AENAFAKMQE RGLSNPRRSR HRLTPGTVKF
0701: AAFHVLSLEG EKGLNILEVA EKIQKSGLRD LTTSRTPEAS VAAALSRDTK LFERVAPSTY CVRASYRKDA GDAETIFAEA RERIRAFKSG ITDVEDVDDA
0801: ERDEDSESDV GEDPEVDVNL KKEDPNPLKV ENLIGVEPLL ENGKLDTVPM KTELGLPLTP SLPEEMKDEK RDDTLADQSL EDAVANGEDS ACFDESKLGE
0901: QWVQGLVEGD YSNLSSEERL NALVALIGIA TEGNTIRIAL EERLEVASAL KKQMWGEVQL DKRWKEESLI RANYLSYPTA KPGLNIATPA SGNQESSSAD
1001: VTPISSQDPV SLPQIDVNNV IAGPSLQLQE NVPGVENLQY QQQQGYTADR ERLRAQLKAY VGYKAEELYV YRSLPLGQDR RRNRYWRFSA SASRNDPGCG
1101: RIFVELQDGR WRLIDSEEAF DYLVKSLDVR GVRESHLHFM LLKIEASFKE ALRRNVAANP GVCSISSSLD SDTAEISTTF KIELGDSNAV ERCSVLQRFH
1201: SFEKWMWDNM LHPSALSAFK YGAKQSSPLF RICRICAELH FVGDICCPSC GQMHAGPDVG ELCFAEQVAQ LGDNLRRGDT GFILRSSILS PLRIRLLKVQ
1301: LALVEASLPP EGLEAFWTEN LRKSWGMKLL SSSSHEDLYQ VLTTLEAALK RDFLSSNFET TSELLGLQEG ALASDLTCGV NVLPWIPKTA GGVALRLFDF
1401: DSSIVYTPDQ NNDPLKDKES EDFVGLETNI LRNLHEKDVM ETPVQVAAYK QEENWTDPGL GGVSSSGRGG RPPRGRGRPR ARGNGKKPAV SVKPPRGAAN
1501: SNGETMLRPR AQPRGGRKNG RRSGTKGRKR PTQGTLGICN EVGGGRRVKE VAVTAKTSLP DNDDDWIETP ELQDDDGEAS SSGRSFQYED YDDDDVMAPI
1601: DDFDGGGESS KLVGRGEFSL HSDDEYEEEE EEEEDMNMKM DVNVVDDEDE DYINEDSYGR KQHGISISND AATRKRFNKF EDPDLTSSSS SDFQ
0101: AGDLVAGNEL DSRRAARGSG GSGVTVVRRF NEPSSAEVRA IGYVEAQLGE RLRDNGPVLG MEFDPLPPGA FGMPIEMPSH RKATRQAFET NIYVRSDVKP
0201: IKDHVRPIRE YQFIPELPSS RTDHSERVSP SHHFGVPLDG SVMRVSAVSA GHRDDYKISP QIPNLNLATH QGKPGHVYSP NLVEYDSPYQ KSYMDTAAQV
0301: HDDPFVKSER EVGNEDEDDD ALQLERHRKN EEARIAREVE AHEKRIRREL EKQDMLRRKR EEQIRKEMER QDRERRKEEE RLLREKQREE ERYLKEQMRE
0401: LQRREKFLKK ETIRAEKMRQ KEEMRKEKEV ARLKAANERA IARKIAKESM ELIEDERLEL MEVAALTKGL PSMLALDFET LQNLDEYRDK QAIFPPTSVK
0501: LKKPFAVKPW NGSDENVANL LMVWRFLITF ADVLGLWPFT LDEFAQAFHD YDPRLMGEIH IVLLKTIIKD IEGVVRTLST GVGANQNVAA NPGGGHPHVV
0601: EGAYAWGFDI RSWRKNLNVF TWPEILRQLA LSAGLGPQLK KMNIRTVSVH DDNEANNSEN VIFNLRKGVA AENAFAKMQE RGLSNPRRSR HRLTPGTVKF
0701: AAFHVLSLEG EKGLNILEVA EKIQKSGLRD LTTSRTPEAS VAAALSRDTK LFERVAPSTY CVRASYRKDA GDAETIFAEA RERIRAFKSG ITDVEDVDDA
0801: ERDEDSESDV GEDPEVDVNL KKEDPNPLKV ENLIGVEPLL ENGKLDTVPM KTELGLPLTP SLPEEMKDEK RDDTLADQSL EDAVANGEDS ACFDESKLGE
0901: QWVQGLVEGD YSNLSSEERL NALVALIGIA TEGNTIRIAL EERLEVASAL KKQMWGEVQL DKRWKEESLI RANYLSYPTA KPGLNIATPA SGNQESSSAD
1001: VTPISSQDPV SLPQIDVNNV IAGPSLQLQE NVPGVENLQY QQQQGYTADR ERLRAQLKAY VGYKAEELYV YRSLPLGQDR RRNRYWRFSA SASRNDPGCG
1101: RIFVELQDGR WRLIDSEEAF DYLVKSLDVR GVRESHLHFM LLKIEASFKE ALRRNVAANP GVCSISSSLD SDTAEISTTF KIELGDSNAV ERCSVLQRFH
1201: SFEKWMWDNM LHPSALSAFK YGAKQSSPLF RICRICAELH FVGDICCPSC GQMHAGPDVG ELCFAEQVAQ LGDNLRRGDT GFILRSSILS PLRIRLLKVQ
1301: LALVEASLPP EGLEAFWTEN LRKSWGMKLL SSSSHEDLYQ VLTTLEAALK RDFLSSNFET TSELLGLQEG ALASDLTCGV NVLPWIPKTA GGVALRLFDF
1401: DSSIVYTPDQ NNDPLKDKES EDFVGLETNI LRNLHEKDVM ETPVQVAAYK QEENWTDPGL GGVSSSGRGG RPPRGRGRPR ARGNGKKPAV SVKPPRGAAN
1501: SNGETMLRPR AQPRGGRKNG RRSGTKGRKR PTQGTLGICN EVGGGRRVKE VAVTAKTSLP DNDDDWIETP ELQDDDGEAS SSGRSFQYED YDDDDVMAPI
1601: DDFDGGGESS KLVGRGEFSL HSDDEYEEEE EEEEDMNMKM DVNVVDDEDE DYINEDSYGR KQHGISISND AATRKRFNKF EDPDLTSSSS SDFQ
Arabidopsis Description
RLT2Homeobox-DDT domain protein RLT2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFH1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.