Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU75646 | Sorghum | cytosol | 31.65 | 100.0 |
| KXG33081 | Sorghum | nucleus | 96.98 | 95.98 |
| Zm00001d043914_P001 | Maize | nucleus | 27.7 | 89.7 |
| Zm00001d043915_P002 | Maize | nucleus | 61.66 | 88.43 |
| Zm00001d011560_P012 | Maize | nucleus | 88.26 | 86.46 |
| HORVU3Hr1G061660.1 | Barley | nucleus | 75.21 | 74.35 |
| TraesCS3A01G245700.2 | Wheat | nucleus | 75.59 | 74.33 |
| TraesCS3D01G245800.2 | Wheat | nucleus | 75.59 | 74.29 |
| TraesCS3B01G273900.1 | Wheat | nucleus | 74.99 | 73.89 |
| GSMUA_Achr9P06610_001 | Banana | nucleus | 53.48 | 54.99 |
| GSMUA_Achr8P27210_001 | Banana | nucleus | 57.38 | 54.79 |
| VIT_10s0003g00290.t01 | Wine grape | nucleus | 19.58 | 50.0 |
| VIT_12s0028g03090.t01 | Wine grape | nucleus | 41.69 | 49.87 |
| GSMUA_Achr6P26980_001 | Banana | nucleus | 54.85 | 44.56 |
| Solyc07g053610.2.1 | Tomato | nucleus | 43.39 | 44.39 |
| KRH21359 | Soybean | nucleus | 42.18 | 43.82 |
| KRH55891 | Soybean | nucleus | 42.35 | 43.35 |
| AT5G44180.1 | Thale cress | nucleus | 40.26 | 43.33 |
| CDY22305 | Canola | nucleus | 38.78 | 43.14 |
| Bra033725.1-P | Field mustard | nucleus | 38.78 | 43.11 |
| CDX94760 | Canola | nucleus | 39.28 | 42.98 |
| KRH50116 | Soybean | nucleus | 41.8 | 42.76 |
| KRH20389 | Soybean | nucleus | 42.07 | 42.71 |
| CDY35748 | Canola | nucleus | 35.87 | 42.25 |
| VIT_10s0003g00270.t01 | Wine grape | nucleus | 25.95 | 42.19 |
| Bra010869.1-P | Field mustard | nucleus | 36.26 | 42.1 |
| CDX90154 | Canola | nucleus | 36.15 | 41.89 |
| Solyc02g077660.2.1 | Tomato | nucleus | 37.79 | 41.06 |
| AT1G28420.1 | Thale cress | nucleus | 38.29 | 40.94 |
| Bra032908.1-P | Field mustard | nucleus | 36.59 | 40.13 |
| CDY34099 | Canola | nucleus | 36.64 | 40.12 |
| CDY65661 | Canola | nucleus | 36.48 | 39.77 |
| EER90701 | Sorghum | nucleus | 16.13 | 25.63 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.7 | UniProt:A0A1B6Q589 | ncoils:Coil | InterPro:DDT_dom | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:HB1/Asxl_HTH | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 |
| InterPro:IPR018501 | EnsemblPlants:KXG33083 | ProteinID:KXG33083 | ProteinID:KXG33083.1 | PFAM:PF00046 | PFAM:PF02791 |
| PFAM:PF05066 | PFAM:PF15612 | PFAM:PF15613 | PFscan:PS50071 | PFscan:PS50827 | PANTHER:PTHR36968 |
| SMART:SM00389 | SMART:SM00571 | EnsemblPlantsGene:SORBI_3003G252200 | SUPFAM:SSF46689 | UniParc:UPI00081AC084 | InterPro:WHIM1_dom |
| InterPro:WHIM2_dom | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:+:59054607..59078060
Molecular Weight (calculated)
203420.0 Da
IEP (calculated)
5.291
GRAVY (calculated)
-0.779
Length
1823 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDAGGDGDGD GAGKAALEAP AEATTPPPAP VAAPAPVSAS TAAAGAGTSG SGEKPVKRMM KTPYQLEVLE KTYAAEQYPS EAMRLELSAK IGLSDRQLQM
0101: WFCHRRLKDR KPPAKRQRRE EESALAPVMP PPPVLPAPVS VMPLASSDHM VGAPGPYDEP LHPVHSRRGA GRSSAVPRIS MPDIGRRYYE PTPIMIAPAI
0201: PSMQLTQSEL RVINSVESEL GEPLREDGPA LGIEFDPLPP GAFGAPIVPE QQKQPVRSYN TKMFSRHDQK LLKASAFLPT MESPSVPNSF TGKRKSTVGN
0301: SPIVQPHVGS RAVHEYQFLP EQPSDTYERA SRSHYYDTPV EVSNSRISSL TSGSQLLHGS EVAAPSYAFQ GHTSGSSLMP QSSRSQVAAF ENPLISYERR
0401: AYHDEDTSRV ERKRKHNEEA KIAKEVEAHE RRIRKELEKQ DILNRKREEQ RRKEMERLDR ERRKEEERLL RERQREEERF QREQRREHER MEKLLQKQSR
0501: RAEKQRQKEE LRKEKEAARQ KAANERATAR RIAREYMELV EDERLELMEL AAQNKGLPSM LHLDSDTLQQ LDSFRGMLRQ FPPATVRLKL PFSIKPWTGS
0601: EDNVGKLLMV WKFFITFTDV LGLCPVTLDE FVQSLHDYDS RLLGELHVAL LKSIIKDIED VARTQSIALG VNPGGHPQIV EGAYAWGFNI RSWQRHLNLL
0701: TWPEILRQFA LSAGFGPQLK KRTVEDSYYR NDNEGHDGEN VISTLRNGSA AVNAAAKMKE RGYTNRRRSR HRLTPGTVKF AAFHVLSLEG SKGLTILEVA
0801: EKIQKSGLRD LTTSKTPEAS IAAALSRDTK LFERTAPSTY CVKSPYRKDP ADSEAVLSAA REKIRAFQNV LSDSEAEKEA DEAERDDDSE CDDADDDPDG
0901: DDVNTEVEDD KDPPLAVKAQ DEVPSTTTVI GIRSELDSVG NALNSSSSFT KSAKGTPLPS LGKSDAADTS NDSPLGGSSA NHEVAPGDSE NTQIDESNQV
1001: EPWVRALAEG DYYDLSVEER LNALVALVGV ATEGNSIRGV LEERLELANA LKKQMWAEAQ LDKRRSKEEF ASRVQYNSDM GLKADIYQEN NATEISSTPA
1101: CDVYKENDGH VGTINSCEMD DQHNQGNFGS MAYERNGIGQ EILATPDTSY VQQYAYADKT RSQLKSYIGH RAEQLYVYRS LPLGQDRRRN RYWQFTTSAS
1201: PNDLGSGRIF FESKDGCWRV IDSEEAFDSL VAALDTRGSR EAQLHSMLQV IEPTFKEAIK RRSAGIELPA GRYPKNGATD MIRANYHSEV GSSSSTPFGV
1301: TSDIVTAYAD SFKVELGRND FEKTAISKRA DKFLKWMWRE CYNQELTCAM KYGKKRCSEL LHSCNCCYQI YLAEERHCPS CHKTFKSIYN FSDHTTQCEE
1401: KRRTDPYWKM QITDYSVPIG MVLLKLQLVM IEAAIPSEAL QPFWTDVYRK SWSVKLYTTK SIAETFQLLT VLEGAIRPGC LSSDFETTSE CLNSQSIAPQ
1501: NPVLPAGSAS ALPWVPDTTS AVMLRMLDLD SAISYVQNQK MERDDGGFMK FPSRYTVAKS KQEGILEPTG LNLYDGRWLP GSGRRGRGRG SRGGSRGGRG
1601: RSRGGRIPRG VSSSSRIEFK DEIVASDKAP RKNARRGRAR GRGSRRGRRT VRPRQPSAGR ARSIPKENLL GSFSMLSSSK PAPVEESPQS SGADEWGLET
1701: RVTYNECDEN SSGSESEDNE ENGQPMDEDY EEQVLDYSMG YSSGSRHHGT MSMMDHETEE EDEDAEGDEN VEEDDADQAV DDADVEMDED DETGDDGEDG
1801: NVGGEMNADE DPDATSYSSD YSE
0101: WFCHRRLKDR KPPAKRQRRE EESALAPVMP PPPVLPAPVS VMPLASSDHM VGAPGPYDEP LHPVHSRRGA GRSSAVPRIS MPDIGRRYYE PTPIMIAPAI
0201: PSMQLTQSEL RVINSVESEL GEPLREDGPA LGIEFDPLPP GAFGAPIVPE QQKQPVRSYN TKMFSRHDQK LLKASAFLPT MESPSVPNSF TGKRKSTVGN
0301: SPIVQPHVGS RAVHEYQFLP EQPSDTYERA SRSHYYDTPV EVSNSRISSL TSGSQLLHGS EVAAPSYAFQ GHTSGSSLMP QSSRSQVAAF ENPLISYERR
0401: AYHDEDTSRV ERKRKHNEEA KIAKEVEAHE RRIRKELEKQ DILNRKREEQ RRKEMERLDR ERRKEEERLL RERQREEERF QREQRREHER MEKLLQKQSR
0501: RAEKQRQKEE LRKEKEAARQ KAANERATAR RIAREYMELV EDERLELMEL AAQNKGLPSM LHLDSDTLQQ LDSFRGMLRQ FPPATVRLKL PFSIKPWTGS
0601: EDNVGKLLMV WKFFITFTDV LGLCPVTLDE FVQSLHDYDS RLLGELHVAL LKSIIKDIED VARTQSIALG VNPGGHPQIV EGAYAWGFNI RSWQRHLNLL
0701: TWPEILRQFA LSAGFGPQLK KRTVEDSYYR NDNEGHDGEN VISTLRNGSA AVNAAAKMKE RGYTNRRRSR HRLTPGTVKF AAFHVLSLEG SKGLTILEVA
0801: EKIQKSGLRD LTTSKTPEAS IAAALSRDTK LFERTAPSTY CVKSPYRKDP ADSEAVLSAA REKIRAFQNV LSDSEAEKEA DEAERDDDSE CDDADDDPDG
0901: DDVNTEVEDD KDPPLAVKAQ DEVPSTTTVI GIRSELDSVG NALNSSSSFT KSAKGTPLPS LGKSDAADTS NDSPLGGSSA NHEVAPGDSE NTQIDESNQV
1001: EPWVRALAEG DYYDLSVEER LNALVALVGV ATEGNSIRGV LEERLELANA LKKQMWAEAQ LDKRRSKEEF ASRVQYNSDM GLKADIYQEN NATEISSTPA
1101: CDVYKENDGH VGTINSCEMD DQHNQGNFGS MAYERNGIGQ EILATPDTSY VQQYAYADKT RSQLKSYIGH RAEQLYVYRS LPLGQDRRRN RYWQFTTSAS
1201: PNDLGSGRIF FESKDGCWRV IDSEEAFDSL VAALDTRGSR EAQLHSMLQV IEPTFKEAIK RRSAGIELPA GRYPKNGATD MIRANYHSEV GSSSSTPFGV
1301: TSDIVTAYAD SFKVELGRND FEKTAISKRA DKFLKWMWRE CYNQELTCAM KYGKKRCSEL LHSCNCCYQI YLAEERHCPS CHKTFKSIYN FSDHTTQCEE
1401: KRRTDPYWKM QITDYSVPIG MVLLKLQLVM IEAAIPSEAL QPFWTDVYRK SWSVKLYTTK SIAETFQLLT VLEGAIRPGC LSSDFETTSE CLNSQSIAPQ
1501: NPVLPAGSAS ALPWVPDTTS AVMLRMLDLD SAISYVQNQK MERDDGGFMK FPSRYTVAKS KQEGILEPTG LNLYDGRWLP GSGRRGRGRG SRGGSRGGRG
1601: RSRGGRIPRG VSSSSRIEFK DEIVASDKAP RKNARRGRAR GRGSRRGRRT VRPRQPSAGR ARSIPKENLL GSFSMLSSSK PAPVEESPQS SGADEWGLET
1701: RVTYNECDEN SSGSESEDNE ENGQPMDEDY EEQVLDYSMG YSSGSRHHGT MSMMDHETEE EDEDAEGDEN VEEDDADQAV DDADVEMDED DETGDDGEDG
1801: NVGGEMNADE DPDATSYSSD YSE
0001: MEGGSEKTTP EGCGGESKSK RKMKTAAQLE VLENTYSAEP YPSEAIRADL SVKLNLSDRQ LQMWFCHRRL KERKSTTPSK RQRKELVTPT AMESWEPPVN
0101: AGDLVAGNEL DSRRAARGSG GSGVTVVRRF NEPSSAEVRA IGYVEAQLGE RLRDNGPVLG MEFDPLPPGA FGMPIEMPSH RKATRQAFET NIYVRSDVKP
0201: IKDHVRPIRE YQFIPELPSS RTDHSERVSP SHHFGVPLDG SVMRVSAVSA GHRDDYKISP QIPNLNLATH QGKPGHVYSP NLVEYDSPYQ KSYMDTAAQV
0301: HDDPFVKSER EVGNEDEDDD ALQLERHRKN EEARIAREVE AHEKRIRREL EKQDMLRRKR EEQIRKEMER QDRERRKEEE RLLREKQREE ERYLKEQMRE
0401: LQRREKFLKK ETIRAEKMRQ KEEMRKEKEV ARLKAANERA IARKIAKESM ELIEDERLEL MEVAALTKGL PSMLALDFET LQNLDEYRDK QAIFPPTSVK
0501: LKKPFAVKPW NGSDENVANL LMVWRFLITF ADVLGLWPFT LDEFAQAFHD YDPRLMGEIH IVLLKTIIKD IEGVVRTLST GVGANQNVAA NPGGGHPHVV
0601: EGAYAWGFDI RSWRKNLNVF TWPEILRQLA LSAGLGPQLK KMNIRTVSVH DDNEANNSEN VIFNLRKGVA AENAFAKMQE RGLSNPRRSR HRLTPGTVKF
0701: AAFHVLSLEG EKGLNILEVA EKIQKSGLRD LTTSRTPEAS VAAALSRDTK LFERVAPSTY CVRASYRKDA GDAETIFAEA RERIRAFKSG ITDVEDVDDA
0801: ERDEDSESDV GEDPEVDVNL KKEDPNPLKV ENLIGVEPLL ENGKLDTVPM KTELGLPLTP SLPEEMKDEK RDDTLADQSL EDAVANGEDS ACFDESKLGE
0901: QWVQGLVEGD YSNLSSEERL NALVALIGIA TEGNTIRIAL EERLEVASAL KKQMWGEVQL DKRWKEESLI RANYLSYPTA KPGLNIATPA SGNQESSSAD
1001: VTPISSQDPV SLPQIDVNNV IAGPSLQLQE NVPGVENLQY QQQQGYTADR ERLRAQLKAY VGYKAEELYV YRSLPLGQDR RRNRYWRFSA SASRNDPGCG
1101: RIFVELQDGR WRLIDSEEAF DYLVKSLDVR GVRESHLHFM LLKIEASFKE ALRRNVAANP GVCSISSSLD SDTAEISTTF KIELGDSNAV ERCSVLQRFH
1201: SFEKWMWDNM LHPSALSAFK YGAKQSSPLF RICRICAELH FVGDICCPSC GQMHAGPDVG ELCFAEQVAQ LGDNLRRGDT GFILRSSILS PLRIRLLKVQ
1301: LALVEASLPP EGLEAFWTEN LRKSWGMKLL SSSSHEDLYQ VLTTLEAALK RDFLSSNFET TSELLGLQEG ALASDLTCGV NVLPWIPKTA GGVALRLFDF
1401: DSSIVYTPDQ NNDPLKDKES EDFVGLETNI LRNLHEKDVM ETPVQVAAYK QEENWTDPGL GGVSSSGRGG RPPRGRGRPR ARGNGKKPAV SVKPPRGAAN
1501: SNGETMLRPR AQPRGGRKNG RRSGTKGRKR PTQGTLGICN EVGGGRRVKE VAVTAKTSLP DNDDDWIETP ELQDDDGEAS SSGRSFQYED YDDDDVMAPI
1601: DDFDGGGESS KLVGRGEFSL HSDDEYEEEE EEEEDMNMKM DVNVVDDEDE DYINEDSYGR KQHGISISND AATRKRFNKF EDPDLTSSSS SDFQ
0101: AGDLVAGNEL DSRRAARGSG GSGVTVVRRF NEPSSAEVRA IGYVEAQLGE RLRDNGPVLG MEFDPLPPGA FGMPIEMPSH RKATRQAFET NIYVRSDVKP
0201: IKDHVRPIRE YQFIPELPSS RTDHSERVSP SHHFGVPLDG SVMRVSAVSA GHRDDYKISP QIPNLNLATH QGKPGHVYSP NLVEYDSPYQ KSYMDTAAQV
0301: HDDPFVKSER EVGNEDEDDD ALQLERHRKN EEARIAREVE AHEKRIRREL EKQDMLRRKR EEQIRKEMER QDRERRKEEE RLLREKQREE ERYLKEQMRE
0401: LQRREKFLKK ETIRAEKMRQ KEEMRKEKEV ARLKAANERA IARKIAKESM ELIEDERLEL MEVAALTKGL PSMLALDFET LQNLDEYRDK QAIFPPTSVK
0501: LKKPFAVKPW NGSDENVANL LMVWRFLITF ADVLGLWPFT LDEFAQAFHD YDPRLMGEIH IVLLKTIIKD IEGVVRTLST GVGANQNVAA NPGGGHPHVV
0601: EGAYAWGFDI RSWRKNLNVF TWPEILRQLA LSAGLGPQLK KMNIRTVSVH DDNEANNSEN VIFNLRKGVA AENAFAKMQE RGLSNPRRSR HRLTPGTVKF
0701: AAFHVLSLEG EKGLNILEVA EKIQKSGLRD LTTSRTPEAS VAAALSRDTK LFERVAPSTY CVRASYRKDA GDAETIFAEA RERIRAFKSG ITDVEDVDDA
0801: ERDEDSESDV GEDPEVDVNL KKEDPNPLKV ENLIGVEPLL ENGKLDTVPM KTELGLPLTP SLPEEMKDEK RDDTLADQSL EDAVANGEDS ACFDESKLGE
0901: QWVQGLVEGD YSNLSSEERL NALVALIGIA TEGNTIRIAL EERLEVASAL KKQMWGEVQL DKRWKEESLI RANYLSYPTA KPGLNIATPA SGNQESSSAD
1001: VTPISSQDPV SLPQIDVNNV IAGPSLQLQE NVPGVENLQY QQQQGYTADR ERLRAQLKAY VGYKAEELYV YRSLPLGQDR RRNRYWRFSA SASRNDPGCG
1101: RIFVELQDGR WRLIDSEEAF DYLVKSLDVR GVRESHLHFM LLKIEASFKE ALRRNVAANP GVCSISSSLD SDTAEISTTF KIELGDSNAV ERCSVLQRFH
1201: SFEKWMWDNM LHPSALSAFK YGAKQSSPLF RICRICAELH FVGDICCPSC GQMHAGPDVG ELCFAEQVAQ LGDNLRRGDT GFILRSSILS PLRIRLLKVQ
1301: LALVEASLPP EGLEAFWTEN LRKSWGMKLL SSSSHEDLYQ VLTTLEAALK RDFLSSNFET TSELLGLQEG ALASDLTCGV NVLPWIPKTA GGVALRLFDF
1401: DSSIVYTPDQ NNDPLKDKES EDFVGLETNI LRNLHEKDVM ETPVQVAAYK QEENWTDPGL GGVSSSGRGG RPPRGRGRPR ARGNGKKPAV SVKPPRGAAN
1501: SNGETMLRPR AQPRGGRKNG RRSGTKGRKR PTQGTLGICN EVGGGRRVKE VAVTAKTSLP DNDDDWIETP ELQDDDGEAS SSGRSFQYED YDDDDVMAPI
1601: DDFDGGGESS KLVGRGEFSL HSDDEYEEEE EEEEDMNMKM DVNVVDDEDE DYINEDSYGR KQHGISISND AATRKRFNKF EDPDLTSSSS SDFQ
Arabidopsis Description
RLT2Homeobox-DDT domain protein RLT2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFH1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.