Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d034515_P002 | Maize | nucleus | 87.71 | 85.4 |
| TraesCS2B01G147300.4 | Wheat | nucleus | 63.56 | 66.76 |
| TraesCS2A01G124800.1 | Wheat | nucleus | 63.38 | 66.7 |
| TraesCS3A01G112300.2 | Wheat | nucleus | 63.12 | 66.61 |
| TraesCS3B01G131700.9 | Wheat | nucleus | 63.03 | 65.61 |
| TraesCS2D01G127700.1 | Wheat | vacuole | 63.47 | 65.59 |
| TraesCS3D01G114300.2 | Wheat | nucleus | 65.13 | 65.18 |
| HORVU3Hr1G020400.11 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 40.63 | 62.3 |
| HORVU2Hr1G021950.4 | Barley | nucleus, plastid | 63.03 | 60.86 |
| GSMUA_Achr9P24830_001 | Banana | cytosol, nucleus, plasma membrane | 36.7 | 51.85 |
| CDX89461 | Canola | cytosol, endoplasmic reticulum | 18.74 | 44.61 |
| PGSC0003DMT400002603 | Potato | cytosol | 33.22 | 44.35 |
| VIT_07s0005g06050.t01 | Wine grape | extracellular | 10.2 | 44.15 |
| VIT_19s0085g00350.t01 | Wine grape | nucleus | 43.59 | 42.19 |
| KRH41406 | Soybean | nucleus | 39.76 | 42.18 |
| KRH60120 | Soybean | nucleus | 39.06 | 41.4 |
| AT4G12750.1 | Thale cress | nucleus | 40.28 | 41.36 |
| GSMUA_Achr6P22010_001 | Banana | nucleus | 36.27 | 40.15 |
| Solyc11g006200.1.1 | Tomato | nucleus | 37.05 | 39.35 |
| Bra014277.1-P | Field mustard | nucleus | 34.7 | 39.02 |
| CDY51255 | Canola | nucleus | 34.09 | 37.45 |
| CDY60841 | Canola | nucleus | 34.0 | 37.43 |
| KXG33083 | Sorghum | nucleus | 25.63 | 16.13 |
| KXG33081 | Sorghum | nucleus | 25.54 | 15.91 |
| OQU75646 | Sorghum | cytosol | 6.19 | 12.3 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:35.1 | UniProt:C5WW77 | InterPro:DDT_dom | EnsemblPlants:EER90701 | ProteinID:EER90701 |
| ProteinID:EER90701.2 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 |
| InterPro:IPR018501 | PFAM:PF00046 | PFAM:PF02791 | PFAM:PF15612 | PFAM:PF15613 | PFscan:PS50071 |
| PFscan:PS50827 | PANTHER:PTHR10390 | PANTHER:PTHR10390:SF44 | SMART:SM00389 | SMART:SM00571 | EnsemblPlantsGene:SORBI_3001G049800 |
| SUPFAM:SSF46689 | UniParc:UPI00081AC133 | InterPro:WHIM1_dom | InterPro:WHIM2_dom | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr1:+:3651840..3663735
Molecular Weight (calculated)
129121.0 Da
IEP (calculated)
7.286
GRAVY (calculated)
-0.540
Length
1147 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPRAQMVTHG LGAKRDNAGA KKSPQQIQML EKFYSDAQYP KPEEMGEYAT CVGLTYSQVR IWFKERRRKE RREMGAIGSQ MERQFRARST GPRSSSSSSS
0101: CNQAPTYGIS RSQSELDTWG MSTAGEESNI ISQVLFPKDY ILSKIFRKDG PPLGSEFDPL PQSAHGCNRE AKCHRSSENQ RTVKKRKIME STTTNQRSDV
0201: YEDTAPVRKH GIGKGLMTVW HAMYSHNMKC QSGPNFIDET GCLRSLRPFD DFDGLEDRDN GRKTQNQGMT RKKIVKRSKV LANRKKVPCK RVSGPKVHPP
0301: MDCHLSVDKS ESSELQTELV NLVDDEELEL SELQAGPNPL RCSAHLSSSG RHDCPLCKDL LAKFPPQSLK MKRLFSTKPW ESSPEMVKKL FQVIRFVYTH
0401: FGSVDVHPFT FDEFVQAFHD KDSLLLGEVH VGLLKLLLLK AEMGSDGVFV PRSSKDCRFL SFLNFVREQE FDANVWIRSL NALTWVEILR QVLVASGFGP
0501: NQHLLNQEFF NKEKNQMVKY GLRPRTLKGE LFALLSKAGS CGLKVSVLAK SSEIIDLNVS SPLELEQLIS LALSSDITLF EKIAPSAYRL RVDPQIKGEE
0601: DSILDSDDSG SVDDDEDTSR SDDGSQKFKF PENESRLARR KEKNAHESPN KCSEIDESYS GERWLLALME GEYSDLSIDE KLDCLVALID VVSGAGSVPR
0701: LEEPQRVLHN VPRVHPPQSG GKIKKLTKNL CQYSDESLNG SGSLDCCHQG RPGRRKNQDY TADPGRNDLP VAAHEPQVVL LGSDRRYNSY WLFLGPCRED
0801: DPGHRRVYFE SSEDGHWEVI DSPQELLSLL SVLDSRGTRE AHLLTSMEKR QACLFEAMKK HVEGGKAARL PAPFDSYCSQ TSSGDGASPK TSSVDGASPV
0901: SDIENTAVPT CLKDSNFDSS SAIVIESGRR GDEKISMWER LQAFDKWIWT SFYSILTAVK SGKKSFKESL VHCESCHDLY WRDEKHCRIC HSTFEVGFDL
1001: EEKYAVHVAT CREPELSHEV PNHKFLPSQL QALKAAIHAI EASMPEAAFT GSWMKSAHKL WVKRLRRTSS LPELLQVLVD FVGAMDVDWL YKSSSSTRFR
1101: TYLDDIIVYF QTMPQTTSAV ALWVVQLDAL VAPYLDKAMT GQQACAR
0101: CNQAPTYGIS RSQSELDTWG MSTAGEESNI ISQVLFPKDY ILSKIFRKDG PPLGSEFDPL PQSAHGCNRE AKCHRSSENQ RTVKKRKIME STTTNQRSDV
0201: YEDTAPVRKH GIGKGLMTVW HAMYSHNMKC QSGPNFIDET GCLRSLRPFD DFDGLEDRDN GRKTQNQGMT RKKIVKRSKV LANRKKVPCK RVSGPKVHPP
0301: MDCHLSVDKS ESSELQTELV NLVDDEELEL SELQAGPNPL RCSAHLSSSG RHDCPLCKDL LAKFPPQSLK MKRLFSTKPW ESSPEMVKKL FQVIRFVYTH
0401: FGSVDVHPFT FDEFVQAFHD KDSLLLGEVH VGLLKLLLLK AEMGSDGVFV PRSSKDCRFL SFLNFVREQE FDANVWIRSL NALTWVEILR QVLVASGFGP
0501: NQHLLNQEFF NKEKNQMVKY GLRPRTLKGE LFALLSKAGS CGLKVSVLAK SSEIIDLNVS SPLELEQLIS LALSSDITLF EKIAPSAYRL RVDPQIKGEE
0601: DSILDSDDSG SVDDDEDTSR SDDGSQKFKF PENESRLARR KEKNAHESPN KCSEIDESYS GERWLLALME GEYSDLSIDE KLDCLVALID VVSGAGSVPR
0701: LEEPQRVLHN VPRVHPPQSG GKIKKLTKNL CQYSDESLNG SGSLDCCHQG RPGRRKNQDY TADPGRNDLP VAAHEPQVVL LGSDRRYNSY WLFLGPCRED
0801: DPGHRRVYFE SSEDGHWEVI DSPQELLSLL SVLDSRGTRE AHLLTSMEKR QACLFEAMKK HVEGGKAARL PAPFDSYCSQ TSSGDGASPK TSSVDGASPV
0901: SDIENTAVPT CLKDSNFDSS SAIVIESGRR GDEKISMWER LQAFDKWIWT SFYSILTAVK SGKKSFKESL VHCESCHDLY WRDEKHCRIC HSTFEVGFDL
1001: EEKYAVHVAT CREPELSHEV PNHKFLPSQL QALKAAIHAI EASMPEAAFT GSWMKSAHKL WVKRLRRTSS LPELLQVLVD FVGAMDVDWL YKSSSSTRFR
1101: TYLDDIIVYF QTMPQTTSAV ALWVVQLDAL VAPYLDKAMT GQQACAR
0001: MKRKSPLQVQ ALEGFYLEQM YPTPKEMEDL GKSLGLTLKE VRGWFKRRRS RGKGVKSMAN DGLGAKNPQL YDRSLMRSST SSRCVGVAVE ERCIVGTRKA
0101: SCQNLLPSSH ILAKVFRKDG PSLGSEFDHL PSGARKASWL GTSSVGQQKQ KVARKRKISE LMDHTSQDCI QENATVMKHG IGKGLMTVWR VMNPNRRDVS
0201: PCVDLLDERA TLPQSSARNP PHQKKKQRQL ASILKQKLLQ KRSTEKKRRS IHREAELNKD ETQREFKENC ELAADGEVFK ETCQTISTLV DDEELEMRER
0301: HERGNPLTCS CHHPSSGSHG CFLCKDLLPK FPPNSVQMRM PFGLHPWNSS PESVKKLFKV VHFLYTYSVT LDIGPFTLDE FTRAFHDKDS LLLGKIHLSL
0401: LKLLLLDVET ELERGSFSNL SISCKFLALL QSVESQILIL DMWRNSLNSL TWTELLRQIL VAAGYGSLKC AVQSEELSKE RKLMKKYGLR LGTLKGELFR
0501: MLNGQGNNGL KISELADAPE VAVLNLATVP EERENSICST LASDITLFEK ISESTYRVRV NCFSEDPDKS QSDSDDSGSV DDESDDCSIS SGDEIEHVSE
0601: NPALRKVKCR KRRKHKSKMR EVCSEIDESH PGEPWLLGLM EGEYSDLSVE EKLDVFVALI DLLSSGSTIR MEDLPRAVAD CAPSIYSHGS GGKIKRSSSN
0701: QYSYPRGSWV HGGELYGIKA LSKSSDSHPV DSSSIVGAFA KLAGNRANNV HPMQSVYLGS DRRFNRYWLF LGTCNANDPG HRCVFFESSE DGHWEVINNK
0801: EALRALLSVL DDRGRREARL IESLEKRESF LCQAMLSRQV TQSETAHFTD IVREDSSSPV SDIDNNLCLN EIANDQFSSQ HAAIVFEIGS KREKSLLWSL
0901: IQEFDDWIWA NFNFNLNSVK HRRRSYLDSL TRCKSCHDLY WRDEKHCKIC HATFEVDIDL EERYAIHAAT CMRKEECDTF PDHKVLSSQL QSLKAAVYAI
1001: ESAMPEDALI GAWRKSAHRL WAKRLRRSSS VSEITQVIGD FVGAINEEWL WHCSDQGQTL MGEIINCFPS MPQTTSAIAL WLVKLDTLIA PYVEKAPPER
1101: DQPLCRTRNT SRRASKR
0101: SCQNLLPSSH ILAKVFRKDG PSLGSEFDHL PSGARKASWL GTSSVGQQKQ KVARKRKISE LMDHTSQDCI QENATVMKHG IGKGLMTVWR VMNPNRRDVS
0201: PCVDLLDERA TLPQSSARNP PHQKKKQRQL ASILKQKLLQ KRSTEKKRRS IHREAELNKD ETQREFKENC ELAADGEVFK ETCQTISTLV DDEELEMRER
0301: HERGNPLTCS CHHPSSGSHG CFLCKDLLPK FPPNSVQMRM PFGLHPWNSS PESVKKLFKV VHFLYTYSVT LDIGPFTLDE FTRAFHDKDS LLLGKIHLSL
0401: LKLLLLDVET ELERGSFSNL SISCKFLALL QSVESQILIL DMWRNSLNSL TWTELLRQIL VAAGYGSLKC AVQSEELSKE RKLMKKYGLR LGTLKGELFR
0501: MLNGQGNNGL KISELADAPE VAVLNLATVP EERENSICST LASDITLFEK ISESTYRVRV NCFSEDPDKS QSDSDDSGSV DDESDDCSIS SGDEIEHVSE
0601: NPALRKVKCR KRRKHKSKMR EVCSEIDESH PGEPWLLGLM EGEYSDLSVE EKLDVFVALI DLLSSGSTIR MEDLPRAVAD CAPSIYSHGS GGKIKRSSSN
0701: QYSYPRGSWV HGGELYGIKA LSKSSDSHPV DSSSIVGAFA KLAGNRANNV HPMQSVYLGS DRRFNRYWLF LGTCNANDPG HRCVFFESSE DGHWEVINNK
0801: EALRALLSVL DDRGRREARL IESLEKRESF LCQAMLSRQV TQSETAHFTD IVREDSSSPV SDIDNNLCLN EIANDQFSSQ HAAIVFEIGS KREKSLLWSL
0901: IQEFDDWIWA NFNFNLNSVK HRRRSYLDSL TRCKSCHDLY WRDEKHCKIC HATFEVDIDL EERYAIHAAT CMRKEECDTF PDHKVLSSQL QSLKAAVYAI
1001: ESAMPEDALI GAWRKSAHRL WAKRLRRSSS VSEITQVIGD FVGAINEEWL WHCSDQGQTL MGEIINCFPS MPQTTSAIAL WLVKLDTLIA PYVEKAPPER
1101: DQPLCRTRNT SRRASKR
Arabidopsis Description
Homeodomain-like transcriptional regulator [Source:TAIR;Acc:AT4G12750]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.