Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- nucleus 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY60841 | Canola | nucleus | 88.92 | 87.04 |
| CDX89461 | Canola | cytosol, endoplasmic reticulum | 40.69 | 86.1 |
| CDY51255 | Canola | nucleus | 82.94 | 81.03 |
| AT4G12750.1 | Thale cress | nucleus | 61.47 | 56.13 |
| PGSC0003DMT400002603 | Potato | cytosol | 38.82 | 46.1 |
| GSMUA_Achr9P24830_001 | Banana | cytosol, nucleus, plasma membrane | 34.41 | 43.23 |
| KRH41406 | Soybean | nucleus | 45.59 | 43.02 |
| KRH60120 | Soybean | nucleus | 45.1 | 42.51 |
| VIT_07s0005g06050.t01 | Wine grape | extracellular | 10.98 | 42.26 |
| VIT_19s0085g00350.t01 | Wine grape | nucleus | 46.67 | 40.17 |
| Solyc11g006200.1.1 | Tomato | nucleus | 42.16 | 39.81 |
| HORVU3Hr1G020400.11 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 28.24 | 38.5 |
| TraesCS3A01G112300.2 | Wheat | nucleus | 38.24 | 35.88 |
| TraesCS2A01G124800.1 | Wheat | nucleus | 38.14 | 35.69 |
| TraesCS2B01G147300.4 | Wheat | nucleus | 38.04 | 35.53 |
| TraesCS2D01G127700.1 | Wheat | vacuole | 38.14 | 35.05 |
| TraesCS3B01G131700.9 | Wheat | nucleus | 37.75 | 34.94 |
| TraesCS3D01G114300.2 | Wheat | nucleus | 39.12 | 34.82 |
| EER90701 | Sorghum | nucleus | 39.02 | 34.7 |
| Zm00001d034515_P002 | Maize | nucleus | 38.63 | 33.45 |
| HORVU2Hr1G021950.4 | Barley | nucleus, plastid | 37.75 | 32.41 |
| GSMUA_Achr6P22010_001 | Banana | nucleus | 31.96 | 31.47 |
| Bra010869.1-P | Field mustard | nucleus | 23.14 | 15.03 |
| Bra032908.1-P | Field mustard | nucleus | 23.14 | 14.2 |
| Bra033725.1-P | Field mustard | nucleus | 22.55 | 14.02 |
| Bra034196.1-P | Field mustard | nucleus | 4.9 | 10.48 |
Protein Annotations
| EnsemblPlants:Bra014277.1 | EnsemblPlants:Bra014277.1-P | EnsemblPlantsGene:Bra014277 | InterPro:DDT_dom | InterPro:IPR018501 | InterPro:WHIM1_dom |
| InterPro:WHIM2_dom | ncoils:Coil | PANTHER:PTHR10390 | PANTHER:PTHR10390:SF44 | PFAM:PF02791 | PFAM:PF15612 |
| PFAM:PF15613 | PFscan:PS50827 | SEG:seg | SMART:SM00571 | UniParc:UPI0002545F9D | UniProt:M4DCR0 |
| MapMan:35.1 | : | : | : | : | : |
Description
AT4G12750 (E=2e-250) | sequence-specific DNA binding / transcription factor
Coordinates
chrA08:-:2021858..2026167
Molecular Weight (calculated)
115428.0 Da
IEP (calculated)
7.878
GRAVY (calculated)
-0.430
Length
1020 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDERRRTSRK KSSVAAAVRA KIPRSALRKI NCQKLLTSQY ILAKVFRKDG PSLGFQFDHL PPSSSSLDQQ RVGRKRKVSE KHTSQDDCVV VKKKQYGIGK
0101: GLMTAWRVMN PNSHERATLA QSNPKKTKTQ LASILKQKQK KKKKPTEKKR NSINTETTEE LNKDETVGFS EKCELGEVFK ETCQTMSILV DDEELERQEG
0201: LVNPPLTCSC HTATSGSCFL CKDLLPKFPP SSVGMRLPFA LHPWNSSPES VKKLFKVVHF LYTYSVTLDI CPFTIDEFTR AFHDKDSLLL GKIHLSLLKL
0301: LLLDVETELQ RGSFSTLSIS CKFLALLQSV ESQILILDMW KDSLNSLTWA EILRQILVAA GFGSVKRAAG QSEELSKERR LMKKYGLRLG TLKGELFRML
0401: NEQGGKNGLK ISELANAAVE VAALNLATAS EEERERSICS TLASDITLFE KISESTYRAR VNCFSEDHES DSGESGSVDD DESGDELGRV SESFVFRKAK
0501: CRKRRKQVLE VCSEIDESHP GEAWLLGLME GEYSDLSIEE KLDVFIALID LLSSGSTIRM EDLPRAMVDC APSIYSHGSG GKIKRASSSN HPRVSWVHGG
0601: ERIEKLSKPS DSHPVDSSSI VGADFAKLAG DNVHPMQSVY LGSDRRFNRY WLFLGPCNAN DPGHRCVYFE SSEDGHWEVI SHKEALRALL SVLDDRGRRE
0701: ARLIESLEKR ESFLCQAMLR RIDHVVREDS SSSPVSDIDN NNLCLNEIAN DQQAAIVFEK RGNSLLWSLV QEFDEWIWDK YYLNLNVVKH SRRSYLDSLT
0801: RCKSCHDLYW RDEKHCKICH ATFELDIDLE ERYAIHEATC SRKNEESSDS FPDHKVRSSQ LQSLKAAVYA IESAMPEDAL IGAWKKSAHR LWAKRLRRSS
0901: TLSEITQVIG DFVGAINEDW LWHFGEEEEG EIITSFPSMP RTTSAIALWL VKLDTLIASY VVEKAPQPEG NQLNRTRKYK YELTSLSSSS VSVLKCFLSI
1001: ARFLFHLRPT TTSRFHILVI
0101: GLMTAWRVMN PNSHERATLA QSNPKKTKTQ LASILKQKQK KKKKPTEKKR NSINTETTEE LNKDETVGFS EKCELGEVFK ETCQTMSILV DDEELERQEG
0201: LVNPPLTCSC HTATSGSCFL CKDLLPKFPP SSVGMRLPFA LHPWNSSPES VKKLFKVVHF LYTYSVTLDI CPFTIDEFTR AFHDKDSLLL GKIHLSLLKL
0301: LLLDVETELQ RGSFSTLSIS CKFLALLQSV ESQILILDMW KDSLNSLTWA EILRQILVAA GFGSVKRAAG QSEELSKERR LMKKYGLRLG TLKGELFRML
0401: NEQGGKNGLK ISELANAAVE VAALNLATAS EEERERSICS TLASDITLFE KISESTYRAR VNCFSEDHES DSGESGSVDD DESGDELGRV SESFVFRKAK
0501: CRKRRKQVLE VCSEIDESHP GEAWLLGLME GEYSDLSIEE KLDVFIALID LLSSGSTIRM EDLPRAMVDC APSIYSHGSG GKIKRASSSN HPRVSWVHGG
0601: ERIEKLSKPS DSHPVDSSSI VGADFAKLAG DNVHPMQSVY LGSDRRFNRY WLFLGPCNAN DPGHRCVYFE SSEDGHWEVI SHKEALRALL SVLDDRGRRE
0701: ARLIESLEKR ESFLCQAMLR RIDHVVREDS SSSPVSDIDN NNLCLNEIAN DQQAAIVFEK RGNSLLWSLV QEFDEWIWDK YYLNLNVVKH SRRSYLDSLT
0801: RCKSCHDLYW RDEKHCKICH ATFELDIDLE ERYAIHEATC SRKNEESSDS FPDHKVRSSQ LQSLKAAVYA IESAMPEDAL IGAWKKSAHR LWAKRLRRSS
0901: TLSEITQVIG DFVGAINEDW LWHFGEEEEG EIITSFPSMP RTTSAIALWL VKLDTLIASY VVEKAPQPEG NQLNRTRKYK YELTSLSSSS VSVLKCFLSI
1001: ARFLFHLRPT TTSRFHILVI
0001: MKRKSPLQVQ ALEGFYLEQM YPTPKEMEDL GKSLGLTLKE VRGWFKRRRS RGKGVKSMAN DGLGAKNPQL YDRSLMRSST SSRCVGVAVE ERCIVGTRKA
0101: SCQNLLPSSH ILAKVFRKDG PSLGSEFDHL PSGARKASWL GTSSVGQQKQ KVARKRKISE LMDHTSQDCI QENATVMKHG IGKGLMTVWR VMNPNRRDVS
0201: PCVDLLDERA TLPQSSARNP PHQKKKQRQL ASILKQKLLQ KRSTEKKRRS IHREAELNKD ETQREFKENC ELAADGEVFK ETCQTISTLV DDEELEMRER
0301: HERGNPLTCS CHHPSSGSHG CFLCKDLLPK FPPNSVQMRM PFGLHPWNSS PESVKKLFKV VHFLYTYSVT LDIGPFTLDE FTRAFHDKDS LLLGKIHLSL
0401: LKLLLLDVET ELERGSFSNL SISCKFLALL QSVESQILIL DMWRNSLNSL TWTELLRQIL VAAGYGSLKC AVQSEELSKE RKLMKKYGLR LGTLKGELFR
0501: MLNGQGNNGL KISELADAPE VAVLNLATVP EERENSICST LASDITLFEK ISESTYRVRV NCFSEDPDKS QSDSDDSGSV DDESDDCSIS SGDEIEHVSE
0601: NPALRKVKCR KRRKHKSKMR EVCSEIDESH PGEPWLLGLM EGEYSDLSVE EKLDVFVALI DLLSSGSTIR MEDLPRAVAD CAPSIYSHGS GGKIKRSSSN
0701: QYSYPRGSWV HGGELYGIKA LSKSSDSHPV DSSSIVGAFA KLAGNRANNV HPMQSVYLGS DRRFNRYWLF LGTCNANDPG HRCVFFESSE DGHWEVINNK
0801: EALRALLSVL DDRGRREARL IESLEKRESF LCQAMLSRQV TQSETAHFTD IVREDSSSPV SDIDNNLCLN EIANDQFSSQ HAAIVFEIGS KREKSLLWSL
0901: IQEFDDWIWA NFNFNLNSVK HRRRSYLDSL TRCKSCHDLY WRDEKHCKIC HATFEVDIDL EERYAIHAAT CMRKEECDTF PDHKVLSSQL QSLKAAVYAI
1001: ESAMPEDALI GAWRKSAHRL WAKRLRRSSS VSEITQVIGD FVGAINEEWL WHCSDQGQTL MGEIINCFPS MPQTTSAIAL WLVKLDTLIA PYVEKAPPER
1101: DQPLCRTRNT SRRASKR
0101: SCQNLLPSSH ILAKVFRKDG PSLGSEFDHL PSGARKASWL GTSSVGQQKQ KVARKRKISE LMDHTSQDCI QENATVMKHG IGKGLMTVWR VMNPNRRDVS
0201: PCVDLLDERA TLPQSSARNP PHQKKKQRQL ASILKQKLLQ KRSTEKKRRS IHREAELNKD ETQREFKENC ELAADGEVFK ETCQTISTLV DDEELEMRER
0301: HERGNPLTCS CHHPSSGSHG CFLCKDLLPK FPPNSVQMRM PFGLHPWNSS PESVKKLFKV VHFLYTYSVT LDIGPFTLDE FTRAFHDKDS LLLGKIHLSL
0401: LKLLLLDVET ELERGSFSNL SISCKFLALL QSVESQILIL DMWRNSLNSL TWTELLRQIL VAAGYGSLKC AVQSEELSKE RKLMKKYGLR LGTLKGELFR
0501: MLNGQGNNGL KISELADAPE VAVLNLATVP EERENSICST LASDITLFEK ISESTYRVRV NCFSEDPDKS QSDSDDSGSV DDESDDCSIS SGDEIEHVSE
0601: NPALRKVKCR KRRKHKSKMR EVCSEIDESH PGEPWLLGLM EGEYSDLSVE EKLDVFVALI DLLSSGSTIR MEDLPRAVAD CAPSIYSHGS GGKIKRSSSN
0701: QYSYPRGSWV HGGELYGIKA LSKSSDSHPV DSSSIVGAFA KLAGNRANNV HPMQSVYLGS DRRFNRYWLF LGTCNANDPG HRCVFFESSE DGHWEVINNK
0801: EALRALLSVL DDRGRREARL IESLEKRESF LCQAMLSRQV TQSETAHFTD IVREDSSSPV SDIDNNLCLN EIANDQFSSQ HAAIVFEIGS KREKSLLWSL
0901: IQEFDDWIWA NFNFNLNSVK HRRRSYLDSL TRCKSCHDLY WRDEKHCKIC HATFEVDIDL EERYAIHAAT CMRKEECDTF PDHKVLSSQL QSLKAAVYAI
1001: ESAMPEDALI GAWRKSAHRL WAKRLRRSSS VSEITQVIGD FVGAINEEWL WHCSDQGQTL MGEIINCFPS MPQTTSAIAL WLVKLDTLIA PYVEKAPPER
1101: DQPLCRTRNT SRRASKR
Arabidopsis Description
Homeodomain-like transcriptional regulator [Source:TAIR;Acc:AT4G12750]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.