Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89461 | Canola | cytosol, endoplasmic reticulum | 29.31 | 49.38 |
| HORVU3Hr1G020400.11 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 45.44 | 49.33 |
| VIT_07s0005g06050.t01 | Wine grape | extracellular | 15.64 | 47.92 |
| PGSC0003DMT400002603 | Potato | cytosol | 43.35 | 40.98 |
| TraesCS3A01G112300.2 | Wheat | nucleus | 53.94 | 40.29 |
| TraesCS2A01G124800.1 | Wheat | nucleus | 53.69 | 40.0 |
| TraesCS2B01G147300.4 | Wheat | nucleus | 53.45 | 39.74 |
| TraesCS3B01G131700.9 | Wheat | nucleus | 53.57 | 39.47 |
| TraesCS2D01G127700.1 | Wheat | vacuole | 53.82 | 39.37 |
| TraesCS3D01G114300.2 | Wheat | nucleus | 53.69 | 38.05 |
| GSMUA_Achr6P22010_001 | Banana | nucleus | 47.91 | 37.55 |
| EER90701 | Sorghum | nucleus | 51.85 | 36.7 |
| HORVU2Hr1G021950.4 | Barley | nucleus, plastid | 53.57 | 36.62 |
| KRH60120 | Soybean | nucleus | 48.65 | 36.51 |
| KRH41406 | Soybean | nucleus | 47.91 | 35.99 |
| VIT_19s0085g00350.t01 | Wine grape | nucleus | 52.22 | 35.78 |
| Zm00001d034515_P002 | Maize | nucleus | 51.72 | 35.65 |
| Bra014277.1-P | Field mustard | nucleus | 43.23 | 34.41 |
| CDY60841 | Canola | nucleus | 43.47 | 33.88 |
| CDY51255 | Canola | nucleus | 43.47 | 33.81 |
| AT4G12750.1 | Thale cress | nucleus | 45.81 | 33.3 |
| Solyc11g006200.1.1 | Tomato | nucleus | 44.09 | 33.15 |
| GSMUA_Achr9P06610_001 | Banana | nucleus | 29.06 | 13.31 |
| GSMUA_Achr8P27210_001 | Banana | nucleus | 28.94 | 12.31 |
| GSMUA_Achr6P26980_001 | Banana | nucleus | 28.94 | 10.47 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P24830_001 | EnsemblPlants:GSMUA_Achr9T24830_001 | EnsemblPlantsGene:GSMUA_Achr9G24830_001 | InterPro:DDT_dom | InterPro:IPR018501 | InterPro:WHIM1_dom |
| InterPro:WHIM2_dom | PANTHER:PTHR10390 | PANTHER:PTHR10390:SF44 | PFAM:PF02791 | PFAM:PF15612 | PFAM:PF15613 |
| PFscan:PS50827 | SEG:seg | UniParc:UPI0002953828 | UniProt:M0U390 | MapMan:35.1 | : |
Description
DDT, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G24830_001]
Coordinates
chr9:-:29503744..29511595
Molecular Weight (calculated)
91044.9 Da
IEP (calculated)
5.914
GRAVY (calculated)
-0.358
Length
812 amino acids
Sequence
(BLAST)
(BLAST)
001: MLVVQFILTH SVTIEAGPFT LDEFVQAFHD KDSLLLGKVH VALLKLLMLD TEKEITAGFI PRASNACRFL VFLNFVREQD IDVDHWRRSL NPLTWVEILR
101: HVLIAAGFGS KQNTAQRGNY NRILISTCLH KAGQINHCSS FHHCDRLIEQ IISIERNRME KYGLRPRTLK GELFSLLSKQ GSGGLKVSEL AGAPQIVELG
201: FPNTTEELEK LIYSTLSSDI TLFEKIGPSA YRLRVDPQIK GKGDSHSDTE DSGSVDDDSE DDNASGSSDD CEEMESTIHD RRIIKYNSLH KKTSKRITEY
301: TEIDESYSGE AWMQGLMEGE YSTLSIEEKM DAIVALVDLV GGGSSLRMEE PVRAILVNPN ERHRGSGAKI KKSLTNNQVL PVPLLEGNGC GGTYSLLNVS
401: RSDPSELYMG FKNAKASSNI SGCQSSASGI SNSKVRESCQ DMHPPQCILL GSDRRYNNYW LFLGPCTAHD PGHRRVYFES SEDGHWEVID TAQALHSLLS
501: VLDSRGTREA CLLASLEKRK LYLCEAMNEY MTAVIGSRQT KSSRPSDLDS SSGDGSSPIS DVDNYLISVE LDSLSGGSCA IDIETGRNSE EKKQKWDRLQ
601: AFDKWVWNMF YSSLNAVKYS KRSYMESLAR CESCHDLFWR DEKHCKTCHT TFEIDFDLEE RYAIHVATCR EPEDVGDFPK HRILSSQLQA LKASIHAIEA
701: SMPEAALAGT WTTSAHWLWV KRLRRTSSLP ELLQVLTDLV GALNEEWLYD CTTLGSDIVA DDVILQFQTM PQTTSAVALW MVKLDSLIAP HLARVQSERI
801: PICLPQSKRR RT
101: HVLIAAGFGS KQNTAQRGNY NRILISTCLH KAGQINHCSS FHHCDRLIEQ IISIERNRME KYGLRPRTLK GELFSLLSKQ GSGGLKVSEL AGAPQIVELG
201: FPNTTEELEK LIYSTLSSDI TLFEKIGPSA YRLRVDPQIK GKGDSHSDTE DSGSVDDDSE DDNASGSSDD CEEMESTIHD RRIIKYNSLH KKTSKRITEY
301: TEIDESYSGE AWMQGLMEGE YSTLSIEEKM DAIVALVDLV GGGSSLRMEE PVRAILVNPN ERHRGSGAKI KKSLTNNQVL PVPLLEGNGC GGTYSLLNVS
401: RSDPSELYMG FKNAKASSNI SGCQSSASGI SNSKVRESCQ DMHPPQCILL GSDRRYNNYW LFLGPCTAHD PGHRRVYFES SEDGHWEVID TAQALHSLLS
501: VLDSRGTREA CLLASLEKRK LYLCEAMNEY MTAVIGSRQT KSSRPSDLDS SSGDGSSPIS DVDNYLISVE LDSLSGGSCA IDIETGRNSE EKKQKWDRLQ
601: AFDKWVWNMF YSSLNAVKYS KRSYMESLAR CESCHDLFWR DEKHCKTCHT TFEIDFDLEE RYAIHVATCR EPEDVGDFPK HRILSSQLQA LKASIHAIEA
701: SMPEAALAGT WTTSAHWLWV KRLRRTSSLP ELLQVLTDLV GALNEEWLYD CTTLGSDIVA DDVILQFQTM PQTTSAVALW MVKLDSLIAP HLARVQSERI
801: PICLPQSKRR RT
0001: MKRKSPLQVQ ALEGFYLEQM YPTPKEMEDL GKSLGLTLKE VRGWFKRRRS RGKGVKSMAN DGLGAKNPQL YDRSLMRSST SSRCVGVAVE ERCIVGTRKA
0101: SCQNLLPSSH ILAKVFRKDG PSLGSEFDHL PSGARKASWL GTSSVGQQKQ KVARKRKISE LMDHTSQDCI QENATVMKHG IGKGLMTVWR VMNPNRRDVS
0201: PCVDLLDERA TLPQSSARNP PHQKKKQRQL ASILKQKLLQ KRSTEKKRRS IHREAELNKD ETQREFKENC ELAADGEVFK ETCQTISTLV DDEELEMRER
0301: HERGNPLTCS CHHPSSGSHG CFLCKDLLPK FPPNSVQMRM PFGLHPWNSS PESVKKLFKV VHFLYTYSVT LDIGPFTLDE FTRAFHDKDS LLLGKIHLSL
0401: LKLLLLDVET ELERGSFSNL SISCKFLALL QSVESQILIL DMWRNSLNSL TWTELLRQIL VAAGYGSLKC AVQSEELSKE RKLMKKYGLR LGTLKGELFR
0501: MLNGQGNNGL KISELADAPE VAVLNLATVP EERENSICST LASDITLFEK ISESTYRVRV NCFSEDPDKS QSDSDDSGSV DDESDDCSIS SGDEIEHVSE
0601: NPALRKVKCR KRRKHKSKMR EVCSEIDESH PGEPWLLGLM EGEYSDLSVE EKLDVFVALI DLLSSGSTIR MEDLPRAVAD CAPSIYSHGS GGKIKRSSSN
0701: QYSYPRGSWV HGGELYGIKA LSKSSDSHPV DSSSIVGAFA KLAGNRANNV HPMQSVYLGS DRRFNRYWLF LGTCNANDPG HRCVFFESSE DGHWEVINNK
0801: EALRALLSVL DDRGRREARL IESLEKRESF LCQAMLSRQV TQSETAHFTD IVREDSSSPV SDIDNNLCLN EIANDQFSSQ HAAIVFEIGS KREKSLLWSL
0901: IQEFDDWIWA NFNFNLNSVK HRRRSYLDSL TRCKSCHDLY WRDEKHCKIC HATFEVDIDL EERYAIHAAT CMRKEECDTF PDHKVLSSQL QSLKAAVYAI
1001: ESAMPEDALI GAWRKSAHRL WAKRLRRSSS VSEITQVIGD FVGAINEEWL WHCSDQGQTL MGEIINCFPS MPQTTSAIAL WLVKLDTLIA PYVEKAPPER
1101: DQPLCRTRNT SRRASKR
0101: SCQNLLPSSH ILAKVFRKDG PSLGSEFDHL PSGARKASWL GTSSVGQQKQ KVARKRKISE LMDHTSQDCI QENATVMKHG IGKGLMTVWR VMNPNRRDVS
0201: PCVDLLDERA TLPQSSARNP PHQKKKQRQL ASILKQKLLQ KRSTEKKRRS IHREAELNKD ETQREFKENC ELAADGEVFK ETCQTISTLV DDEELEMRER
0301: HERGNPLTCS CHHPSSGSHG CFLCKDLLPK FPPNSVQMRM PFGLHPWNSS PESVKKLFKV VHFLYTYSVT LDIGPFTLDE FTRAFHDKDS LLLGKIHLSL
0401: LKLLLLDVET ELERGSFSNL SISCKFLALL QSVESQILIL DMWRNSLNSL TWTELLRQIL VAAGYGSLKC AVQSEELSKE RKLMKKYGLR LGTLKGELFR
0501: MLNGQGNNGL KISELADAPE VAVLNLATVP EERENSICST LASDITLFEK ISESTYRVRV NCFSEDPDKS QSDSDDSGSV DDESDDCSIS SGDEIEHVSE
0601: NPALRKVKCR KRRKHKSKMR EVCSEIDESH PGEPWLLGLM EGEYSDLSVE EKLDVFVALI DLLSSGSTIR MEDLPRAVAD CAPSIYSHGS GGKIKRSSSN
0701: QYSYPRGSWV HGGELYGIKA LSKSSDSHPV DSSSIVGAFA KLAGNRANNV HPMQSVYLGS DRRFNRYWLF LGTCNANDPG HRCVFFESSE DGHWEVINNK
0801: EALRALLSVL DDRGRREARL IESLEKRESF LCQAMLSRQV TQSETAHFTD IVREDSSSPV SDIDNNLCLN EIANDQFSSQ HAAIVFEIGS KREKSLLWSL
0901: IQEFDDWIWA NFNFNLNSVK HRRRSYLDSL TRCKSCHDLY WRDEKHCKIC HATFEVDIDL EERYAIHAAT CMRKEECDTF PDHKVLSSQL QSLKAAVYAI
1001: ESAMPEDALI GAWRKSAHRL WAKRLRRSSS VSEITQVIGD FVGAINEEWL WHCSDQGQTL MGEIINCFPS MPQTTSAIAL WLVKLDTLIA PYVEKAPPER
1101: DQPLCRTRNT SRRASKR
Arabidopsis Description
Homeodomain-like transcriptional regulator [Source:TAIR;Acc:AT4G12750]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.