Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G112300.2 | Wheat | nucleus | 88.48 | 93.28 |
| TraesCS2D01G127700.1 | Wheat | vacuole | 88.66 | 91.53 |
| HORVU2Hr1G021950.4 | Barley | nucleus, plastid | 87.87 | 84.76 |
| EER90701 | Sorghum | nucleus | 65.18 | 65.13 |
| Zm00001d034515_P002 | Maize | nucleus | 64.83 | 63.07 |
| GSMUA_Achr9P24830_001 | Banana | cytosol, nucleus, plasma membrane | 38.05 | 53.69 |
| VIT_07s0005g06050.t01 | Wine grape | extracellular | 10.82 | 46.79 |
| CDX89461 | Canola | cytosol, endoplasmic reticulum | 19.11 | 45.44 |
| PGSC0003DMT400002603 | Potato | cytosol | 33.77 | 45.05 |
| VIT_19s0085g00350.t01 | Wine grape | nucleus | 43.63 | 42.19 |
| KRH41406 | Soybean | nucleus | 39.44 | 41.81 |
| GSMUA_Achr6P22010_001 | Banana | nucleus | 37.7 | 41.7 |
| KRH60120 | Soybean | nucleus | 39.35 | 41.68 |
| AT4G12750.1 | Thale cress | nucleus | 40.23 | 41.27 |
| Solyc11g006200.1.1 | Tomato | nucleus | 37.96 | 40.28 |
| Bra014277.1-P | Field mustard | nucleus | 34.82 | 39.12 |
| CDY60841 | Canola | nucleus | 34.21 | 37.62 |
| CDY51255 | Canola | nucleus | 34.03 | 37.36 |
| TraesCS3D01G245800.2 | Wheat | nucleus | 23.91 | 14.77 |
| TraesCS1D01G403700.1 | Wheat | nucleus | 23.3 | 14.42 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:35.1 | InterPro:DDT_dom | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR018501 | PFAM:PF00046 |
| PFAM:PF02791 | PFAM:PF15612 | PFAM:PF15613 | PFscan:PS50071 | PANTHER:PTHR10390 | PANTHER:PTHR10390:SF44 |
| SMART:SM00389 | SUPFAM:SSF46689 | EnsemblPlantsGene:TraesCS3D01G114300 | EnsemblPlants:TraesCS3D01G114300.2 | InterPro:WHIM1_dom | InterPro:WHIM2_dom |
| TIGR:cd00086 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr3D:+:67718390..67729205
Molecular Weight (calculated)
128365.0 Da
IEP (calculated)
7.261
GRAVY (calculated)
-0.533
Length
1146 amino acids
Sequence
(BLAST)
(BLAST)
0001: MMAKGFLAKS DNAGTKKSPL QIQMLESFYS EVQYPKPEDL TEYAASVGLT YNQVRIWFKE RRRKERRHME AAEVHVETQA SARSNWPRCS SSRSSNSSQS
0101: PMQGIAGLQP EDDITLGRSM SLVGEKHTLR SQVLFPKDYI LRKVFRKDGP SLGGDPDLLP ERAHVHVRVA DTTGHHSYQD QSVLKKRKIM SPTAQRSTLP
0201: FENNDPVRKH GKGKGLMTVW HAMYSQTAEI QDCSSFIDES GCLRSLRPFE DFGGKLAQKQ TVPRKKVNKK SRPPPSKRKV PCGRVTDLKE HPPVECHLSV
0301: DESESSELRT EQATLVDDEE LELSELQAGP NPLRCSAHIS STGRHGCPLC KDLLARFPPP SVRMKQPFPT KPWESSPEMV VRFVYTHFGS MDVHPFTFDE
0401: FAQAFHDKDS SLLGKVHVSL LKLLMLNTER GSGSVFVPRS SKDSRFSSFL NFVREQEFDV NFWIKSLNSL TWVEILRQVL VASGFGSDHH MLNRNFFNKE
0501: KNQMVKYGLR PRTLKGELFT LLSKKGSGGL KVAELAKSPQ IIGLNLSGAS EVEQLIFSTL SSDITLFEKI APSAYRLRVD PRIKGKEDPR SDTEDSGTVD
0601: DDGDASSSGD ESDGPQESYP EHESRIVRWR QKNVHKNMNK CSEIDESYSG ERWLLGLMEG EYSDLSIDEK LDCLVALIDV VSGAGSVPRL EEPQSVLSNI
0701: QRAQSHASGG KIKKCTRTIY QSSDEYLNRP GSSHSFDSSM QGQSGTLRSQ DYIADSGANE SPTGFAHQPQ IVLLGSDRRY NNYWLFLGPC RADDPGHRRV
0801: YFESSEDGHW EVIDSPQDLL SLLSVLDIRG TREAYLLASM KKRQSCLFEG MKKHLEDGCV VALTASSDSS RSETSSGNRY SPKPSSGDGA SPLSDIDSAS
0901: VPTYLAGNLQ NASSAIGIEV GRRSDEKMLK WERLQALDKW IWTSFYSSLT AVKCGKRSFK ESLVHCESCH DLYWRDEKHC RICHSTFEVG FDLEERYAIH
1001: VATCREPEDL YDVPNHKVLP SQLQALKAAI HAIEARMPTA AFAGLWMKSS HNLWVKRLRR TSSLPELLQV LVDFVGAIDE DWLYQSSSAV SFSSYLDDIT
1101: VYFQTMPQTT SAVALWVVKL DALIAPDLAQ ADSCRGLGKG SIQTRA
0101: PMQGIAGLQP EDDITLGRSM SLVGEKHTLR SQVLFPKDYI LRKVFRKDGP SLGGDPDLLP ERAHVHVRVA DTTGHHSYQD QSVLKKRKIM SPTAQRSTLP
0201: FENNDPVRKH GKGKGLMTVW HAMYSQTAEI QDCSSFIDES GCLRSLRPFE DFGGKLAQKQ TVPRKKVNKK SRPPPSKRKV PCGRVTDLKE HPPVECHLSV
0301: DESESSELRT EQATLVDDEE LELSELQAGP NPLRCSAHIS STGRHGCPLC KDLLARFPPP SVRMKQPFPT KPWESSPEMV VRFVYTHFGS MDVHPFTFDE
0401: FAQAFHDKDS SLLGKVHVSL LKLLMLNTER GSGSVFVPRS SKDSRFSSFL NFVREQEFDV NFWIKSLNSL TWVEILRQVL VASGFGSDHH MLNRNFFNKE
0501: KNQMVKYGLR PRTLKGELFT LLSKKGSGGL KVAELAKSPQ IIGLNLSGAS EVEQLIFSTL SSDITLFEKI APSAYRLRVD PRIKGKEDPR SDTEDSGTVD
0601: DDGDASSSGD ESDGPQESYP EHESRIVRWR QKNVHKNMNK CSEIDESYSG ERWLLGLMEG EYSDLSIDEK LDCLVALIDV VSGAGSVPRL EEPQSVLSNI
0701: QRAQSHASGG KIKKCTRTIY QSSDEYLNRP GSSHSFDSSM QGQSGTLRSQ DYIADSGANE SPTGFAHQPQ IVLLGSDRRY NNYWLFLGPC RADDPGHRRV
0801: YFESSEDGHW EVIDSPQDLL SLLSVLDIRG TREAYLLASM KKRQSCLFEG MKKHLEDGCV VALTASSDSS RSETSSGNRY SPKPSSGDGA SPLSDIDSAS
0901: VPTYLAGNLQ NASSAIGIEV GRRSDEKMLK WERLQALDKW IWTSFYSSLT AVKCGKRSFK ESLVHCESCH DLYWRDEKHC RICHSTFEVG FDLEERYAIH
1001: VATCREPEDL YDVPNHKVLP SQLQALKAAI HAIEARMPTA AFAGLWMKSS HNLWVKRLRR TSSLPELLQV LVDFVGAIDE DWLYQSSSAV SFSSYLDDIT
1101: VYFQTMPQTT SAVALWVVKL DALIAPDLAQ ADSCRGLGKG SIQTRA
0001: MKRKSPLQVQ ALEGFYLEQM YPTPKEMEDL GKSLGLTLKE VRGWFKRRRS RGKGVKSMAN DGLGAKNPQL YDRSLMRSST SSRCVGVAVE ERCIVGTRKA
0101: SCQNLLPSSH ILAKVFRKDG PSLGSEFDHL PSGARKASWL GTSSVGQQKQ KVARKRKISE LMDHTSQDCI QENATVMKHG IGKGLMTVWR VMNPNRRDVS
0201: PCVDLLDERA TLPQSSARNP PHQKKKQRQL ASILKQKLLQ KRSTEKKRRS IHREAELNKD ETQREFKENC ELAADGEVFK ETCQTISTLV DDEELEMRER
0301: HERGNPLTCS CHHPSSGSHG CFLCKDLLPK FPPNSVQMRM PFGLHPWNSS PESVKKLFKV VHFLYTYSVT LDIGPFTLDE FTRAFHDKDS LLLGKIHLSL
0401: LKLLLLDVET ELERGSFSNL SISCKFLALL QSVESQILIL DMWRNSLNSL TWTELLRQIL VAAGYGSLKC AVQSEELSKE RKLMKKYGLR LGTLKGELFR
0501: MLNGQGNNGL KISELADAPE VAVLNLATVP EERENSICST LASDITLFEK ISESTYRVRV NCFSEDPDKS QSDSDDSGSV DDESDDCSIS SGDEIEHVSE
0601: NPALRKVKCR KRRKHKSKMR EVCSEIDESH PGEPWLLGLM EGEYSDLSVE EKLDVFVALI DLLSSGSTIR MEDLPRAVAD CAPSIYSHGS GGKIKRSSSN
0701: QYSYPRGSWV HGGELYGIKA LSKSSDSHPV DSSSIVGAFA KLAGNRANNV HPMQSVYLGS DRRFNRYWLF LGTCNANDPG HRCVFFESSE DGHWEVINNK
0801: EALRALLSVL DDRGRREARL IESLEKRESF LCQAMLSRQV TQSETAHFTD IVREDSSSPV SDIDNNLCLN EIANDQFSSQ HAAIVFEIGS KREKSLLWSL
0901: IQEFDDWIWA NFNFNLNSVK HRRRSYLDSL TRCKSCHDLY WRDEKHCKIC HATFEVDIDL EERYAIHAAT CMRKEECDTF PDHKVLSSQL QSLKAAVYAI
1001: ESAMPEDALI GAWRKSAHRL WAKRLRRSSS VSEITQVIGD FVGAINEEWL WHCSDQGQTL MGEIINCFPS MPQTTSAIAL WLVKLDTLIA PYVEKAPPER
1101: DQPLCRTRNT SRRASKR
0101: SCQNLLPSSH ILAKVFRKDG PSLGSEFDHL PSGARKASWL GTSSVGQQKQ KVARKRKISE LMDHTSQDCI QENATVMKHG IGKGLMTVWR VMNPNRRDVS
0201: PCVDLLDERA TLPQSSARNP PHQKKKQRQL ASILKQKLLQ KRSTEKKRRS IHREAELNKD ETQREFKENC ELAADGEVFK ETCQTISTLV DDEELEMRER
0301: HERGNPLTCS CHHPSSGSHG CFLCKDLLPK FPPNSVQMRM PFGLHPWNSS PESVKKLFKV VHFLYTYSVT LDIGPFTLDE FTRAFHDKDS LLLGKIHLSL
0401: LKLLLLDVET ELERGSFSNL SISCKFLALL QSVESQILIL DMWRNSLNSL TWTELLRQIL VAAGYGSLKC AVQSEELSKE RKLMKKYGLR LGTLKGELFR
0501: MLNGQGNNGL KISELADAPE VAVLNLATVP EERENSICST LASDITLFEK ISESTYRVRV NCFSEDPDKS QSDSDDSGSV DDESDDCSIS SGDEIEHVSE
0601: NPALRKVKCR KRRKHKSKMR EVCSEIDESH PGEPWLLGLM EGEYSDLSVE EKLDVFVALI DLLSSGSTIR MEDLPRAVAD CAPSIYSHGS GGKIKRSSSN
0701: QYSYPRGSWV HGGELYGIKA LSKSSDSHPV DSSSIVGAFA KLAGNRANNV HPMQSVYLGS DRRFNRYWLF LGTCNANDPG HRCVFFESSE DGHWEVINNK
0801: EALRALLSVL DDRGRREARL IESLEKRESF LCQAMLSRQV TQSETAHFTD IVREDSSSPV SDIDNNLCLN EIANDQFSSQ HAAIVFEIGS KREKSLLWSL
0901: IQEFDDWIWA NFNFNLNSVK HRRRSYLDSL TRCKSCHDLY WRDEKHCKIC HATFEVDIDL EERYAIHAAT CMRKEECDTF PDHKVLSSQL QSLKAAVYAI
1001: ESAMPEDALI GAWRKSAHRL WAKRLRRSSS VSEITQVIGD FVGAINEEWL WHCSDQGQTL MGEIINCFPS MPQTTSAIAL WLVKLDTLIA PYVEKAPPER
1101: DQPLCRTRNT SRRASKR
Arabidopsis Description
Homeodomain-like transcriptional regulator [Source:TAIR;Acc:AT4G12750]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.