Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G395600.1 | Wheat | nucleus | 97.25 | 96.88 |
| TraesCS1B01G424100.1 | Wheat | nucleus | 97.03 | 96.46 |
| HORVU1Hr1G087180.1 | Barley | nucleus | 92.98 | 92.73 |
| Os05t0562400-01 | Rice | nucleus | 56.64 | 75.09 |
| Zm00001d039002_P019 | Maize | nucleus, plastid | 65.66 | 66.38 |
| TraesCS3D01G245800.2 | Wheat | nucleus | 64.2 | 64.1 |
| Zm00001d009562_P007 | Maize | nucleus, plastid | 61.56 | 60.74 |
| GSMUA_Achr9P06610_001 | Banana | nucleus | 50.43 | 52.68 |
| GSMUA_Achr8P27210_001 | Banana | nucleus | 53.4 | 51.81 |
| VIT_12s0028g03090.t01 | Wine grape | nucleus | 40.06 | 48.69 |
| VIT_10s0003g00290.t01 | Wine grape | nucleus | 18.47 | 47.9 |
| KRH21359 | Soybean | nucleus | 40.98 | 43.25 |
| Solyc07g053610.2.1 | Tomato | nucleus | 41.47 | 43.1 |
| GSMUA_Achr6P26980_001 | Banana | nucleus | 51.73 | 42.69 |
| CDY35748 | Canola | nucleus | 35.58 | 42.57 |
| AT5G44180.1 | Thale cress | nucleus | 38.88 | 42.5 |
| KRH20389 | Soybean | nucleus | 41.09 | 42.37 |
| CDY22305 | Canola | nucleus | 37.37 | 42.22 |
| Bra033725.1-P | Field mustard | nucleus | 37.37 | 42.2 |
| KRH50116 | Soybean | nucleus | 40.28 | 41.86 |
| Bra010869.1-P | Field mustard | nucleus | 35.48 | 41.85 |
| CDX94760 | Canola | nucleus | 37.53 | 41.72 |
| CDX90154 | Canola | nucleus | 35.42 | 41.7 |
| KRH55891 | Soybean | nucleus | 40.01 | 41.61 |
| Solyc02g077660.2.1 | Tomato | nucleus | 37.31 | 41.18 |
| AT1G28420.1 | Thale cress | nucleus | 37.74 | 41.0 |
| VIT_10s0003g00270.t01 | Wine grape | nucleus | 24.73 | 40.86 |
| Bra032908.1-P | Field mustard | nucleus | 36.61 | 40.79 |
| CDY34099 | Canola | nucleus | 36.61 | 40.72 |
| CDY65661 | Canola | nucleus | 36.56 | 40.49 |
| TraesCS3D01G114300.2 | Wheat | nucleus | 14.42 | 23.3 |
| TraesCS2D01G127700.1 | Wheat | vacuole | 13.93 | 23.24 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.7 | ncoils:Coil | InterPro:DDT_dom | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:HB1/Asxl_HTH | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom |
| InterPro:IPR001356 | InterPro:IPR018501 | PFAM:PF00046 | PFAM:PF02791 | PFAM:PF05066 | PFAM:PF15612 |
| PFAM:PF15613 | PFscan:PS50071 | PFscan:PS50827 | PANTHER:PTHR36968 | SMART:SM00389 | SMART:SM00571 |
| SUPFAM:SSF46689 | EnsemblPlantsGene:TraesCS1D01G403700 | EnsemblPlants:TraesCS1D01G403700.1 | InterPro:WHIM1_dom | InterPro:WHIM2_dom | TIGR:cd00086 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr1D:-:468467676..468479237
Molecular Weight (calculated)
204653.0 Da
IEP (calculated)
5.329
GRAVY (calculated)
-0.770
Length
1852 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDSSGDGGDE GAPASSSAPS AGPGGASGSS GKPTARRVMK TPYQLEVLEQ TYTDDPYPNE AKRVELSAKL GLTDRQLQMW FCHRRLKDRR PPPATKQRDE
0101: EVAVPVLAPP PVLQHSLPHP HAEPTYGEQL LLPCGSSRRG PGRSSAVPRI SAPEVDRRYY EAHPVMLPPQ APVQLTRAAH RAIETVQQLI GEPLREDGPV
0201: LGDHFDPLPP GAFGAPMPVV PEQRKQPYRS HETSVFSAHD PKPMKASAFL PSIDPSVSST VTGKRKYMSG NSSHLPSRAV HEYQFLPEHT SDIYERTSQS
0301: CFYDASAEAS NSRISSLSTG SRLVHGAEKA SSYAFDGQVS GSSHLNQHGK PLISLSGSTD YEMASNIDVS PAPIEGQFGI PQVAGLQNPL ASAEGVDYHD
0401: DAYRLDRKRK HNEESKIAKE VDAEEKRIRK ELEKQDVLKK KREEQMRKEV ERYDRERKKE EERFMREKQR EEERLQKEQW REQKRMEKFL VKQSLRAEKL
0501: KQKEELRKEK EAARQKAANE RATARRIARE YMELMEDERL ELMELVSRSK GLPSMLSLDS DTLQQLDSFR GMLTQFPTEA VRLKVPFSIK PWTSSESNIG
0601: NLLMVWKFFF TFADVLELPS FTLDEFVQSL HDYDSRLLGE LHVAVLKSII KDIEDVARTS SVVSGVNQSS SANPGGGHPQ IVEGAYAWGF NILTWQRHLT
0701: YLTWPEILRQ FGLSAGFGPQ LKKRTEDVYH DDNEGRNSAD VISTLRNGSA AVKSAALMKE RGYTNRRRSR HRLTPGTVKF AAFHVLSLEG DEGLSILEVA
0801: EKIQRSGLRD LTTSKTPEAS ISAALSRDTK LFERTAPSTY CVKTPYRKDP ADSEAVFSEA REKIRVFQNA LSGCEEVEKD VEDAERGDDD SECDEADDDP
0901: DGDEVNIEEK DVNASVARAK DAGLPIAAGD INDEVKGVIN PSMPSSPHSK SPSGLQRMVD KSTAVSTSSD PPIGASQDAE IDESNQGESW VQGLAEGDYC
1001: DLSVEERLNA LVALIGVATE GNSMRAILEE RLEAANALKK QMWAESQLDR RRSREEFAGR MQHDPCTDLK ADVDQGNNVG ECTLTPVHNL IKENGGKASS
1101: VNNDLLVDQQ CQLNAGNMVH EGNGVSRISN ANPESLSAQQ YASSEKTRSQ LKSFIGHKAE QLYVYRSLPL GQDRRRNRYW QFSTSVSSND PGSGRIFFES
1201: RDGYWRLIDS AEAFDALVAS LDTRGIRESH LHSMLQSIES TFKDAIGWIK CATIEHSAGR NLRNGSSEII SPNHSNEFGS PCSTLSGVVS DTGVAYSDSF
1301: KIELGRNDLE KVAISKRACM FLKWMWEGNN HQSTCAMKYG KKRCSDLIHG CDYCYQIYLA EETHCSSCHK TFKSIHSLSE HTSQCEEKRR TDPNWKIQIS
1401: DDSVPIRPRL LKLLLATVEA SVPAEALQPF WTDGYRKSWG VKLFSTSSNE EIFQLLTVLE GALKRDYLSS NFETTAELLN SNTLDFAGRN SIACSGSAAV
1501: LPWVPSTAAA VTLRLLDLDS SLSYTLDQKA GLNKEREAGD FIKGPSRYTA VKNKQEMGLV GAPGFDHHVG AQLTPSNGLR GRGRGGRGRG RGGRSLSRGG
1601: RVPRGVGSSP RIEFRDDNNV SYKETTDKQA GRGRGRGRGR GRGRGRGRGR GSITVSGSGS GSVRGRGRGR GRGLRTVRPR QPVELGARSI PKANLLGTFG
1701: MLSNAKPMTL HSPQSSGAEE WGLDRRAYAE DDEDNSVSQS DESEGDEENG EPMNEDYDEQ LPDYSRDNSG SSPRQMMDSE SEDNDEYDEE GEEDGADYDA
1801: EQPMDEDNDD AEMSGDDELG DDGDDDDGGG SQVGAGNADD DDATSYSSEY SE
0101: EVAVPVLAPP PVLQHSLPHP HAEPTYGEQL LLPCGSSRRG PGRSSAVPRI SAPEVDRRYY EAHPVMLPPQ APVQLTRAAH RAIETVQQLI GEPLREDGPV
0201: LGDHFDPLPP GAFGAPMPVV PEQRKQPYRS HETSVFSAHD PKPMKASAFL PSIDPSVSST VTGKRKYMSG NSSHLPSRAV HEYQFLPEHT SDIYERTSQS
0301: CFYDASAEAS NSRISSLSTG SRLVHGAEKA SSYAFDGQVS GSSHLNQHGK PLISLSGSTD YEMASNIDVS PAPIEGQFGI PQVAGLQNPL ASAEGVDYHD
0401: DAYRLDRKRK HNEESKIAKE VDAEEKRIRK ELEKQDVLKK KREEQMRKEV ERYDRERKKE EERFMREKQR EEERLQKEQW REQKRMEKFL VKQSLRAEKL
0501: KQKEELRKEK EAARQKAANE RATARRIARE YMELMEDERL ELMELVSRSK GLPSMLSLDS DTLQQLDSFR GMLTQFPTEA VRLKVPFSIK PWTSSESNIG
0601: NLLMVWKFFF TFADVLELPS FTLDEFVQSL HDYDSRLLGE LHVAVLKSII KDIEDVARTS SVVSGVNQSS SANPGGGHPQ IVEGAYAWGF NILTWQRHLT
0701: YLTWPEILRQ FGLSAGFGPQ LKKRTEDVYH DDNEGRNSAD VISTLRNGSA AVKSAALMKE RGYTNRRRSR HRLTPGTVKF AAFHVLSLEG DEGLSILEVA
0801: EKIQRSGLRD LTTSKTPEAS ISAALSRDTK LFERTAPSTY CVKTPYRKDP ADSEAVFSEA REKIRVFQNA LSGCEEVEKD VEDAERGDDD SECDEADDDP
0901: DGDEVNIEEK DVNASVARAK DAGLPIAAGD INDEVKGVIN PSMPSSPHSK SPSGLQRMVD KSTAVSTSSD PPIGASQDAE IDESNQGESW VQGLAEGDYC
1001: DLSVEERLNA LVALIGVATE GNSMRAILEE RLEAANALKK QMWAESQLDR RRSREEFAGR MQHDPCTDLK ADVDQGNNVG ECTLTPVHNL IKENGGKASS
1101: VNNDLLVDQQ CQLNAGNMVH EGNGVSRISN ANPESLSAQQ YASSEKTRSQ LKSFIGHKAE QLYVYRSLPL GQDRRRNRYW QFSTSVSSND PGSGRIFFES
1201: RDGYWRLIDS AEAFDALVAS LDTRGIRESH LHSMLQSIES TFKDAIGWIK CATIEHSAGR NLRNGSSEII SPNHSNEFGS PCSTLSGVVS DTGVAYSDSF
1301: KIELGRNDLE KVAISKRACM FLKWMWEGNN HQSTCAMKYG KKRCSDLIHG CDYCYQIYLA EETHCSSCHK TFKSIHSLSE HTSQCEEKRR TDPNWKIQIS
1401: DDSVPIRPRL LKLLLATVEA SVPAEALQPF WTDGYRKSWG VKLFSTSSNE EIFQLLTVLE GALKRDYLSS NFETTAELLN SNTLDFAGRN SIACSGSAAV
1501: LPWVPSTAAA VTLRLLDLDS SLSYTLDQKA GLNKEREAGD FIKGPSRYTA VKNKQEMGLV GAPGFDHHVG AQLTPSNGLR GRGRGGRGRG RGGRSLSRGG
1601: RVPRGVGSSP RIEFRDDNNV SYKETTDKQA GRGRGRGRGR GRGRGRGRGR GSITVSGSGS GSVRGRGRGR GRGLRTVRPR QPVELGARSI PKANLLGTFG
1701: MLSNAKPMTL HSPQSSGAEE WGLDRRAYAE DDEDNSVSQS DESEGDEENG EPMNEDYDEQ LPDYSRDNSG SSPRQMMDSE SEDNDEYDEE GEEDGADYDA
1801: EQPMDEDNDD AEMSGDDELG DDGDDDDGGG SQVGAGNADD DDATSYSSEY SE
0001: MEGGSEKTTP EGCGGESKSK RKMKTAAQLE VLENTYSAEP YPSEAIRADL SVKLNLSDRQ LQMWFCHRRL KERKSTTPSK RQRKELVTPT AMESWEPPVN
0101: AGDLVAGNEL DSRRAARGSG GSGVTVVRRF NEPSSAEVRA IGYVEAQLGE RLRDNGPVLG MEFDPLPPGA FGMPIEMPSH RKATRQAFET NIYVRSDVKP
0201: IKDHVRPIRE YQFIPELPSS RTDHSERVSP SHHFGVPLDG SVMRVSAVSA GHRDDYKISP QIPNLNLATH QGKPGHVYSP NLVEYDSPYQ KSYMDTAAQV
0301: HDDPFVKSER EVGNEDEDDD ALQLERHRKN EEARIAREVE AHEKRIRREL EKQDMLRRKR EEQIRKEMER QDRERRKEEE RLLREKQREE ERYLKEQMRE
0401: LQRREKFLKK ETIRAEKMRQ KEEMRKEKEV ARLKAANERA IARKIAKESM ELIEDERLEL MEVAALTKGL PSMLALDFET LQNLDEYRDK QAIFPPTSVK
0501: LKKPFAVKPW NGSDENVANL LMVWRFLITF ADVLGLWPFT LDEFAQAFHD YDPRLMGEIH IVLLKTIIKD IEGVVRTLST GVGANQNVAA NPGGGHPHVV
0601: EGAYAWGFDI RSWRKNLNVF TWPEILRQLA LSAGLGPQLK KMNIRTVSVH DDNEANNSEN VIFNLRKGVA AENAFAKMQE RGLSNPRRSR HRLTPGTVKF
0701: AAFHVLSLEG EKGLNILEVA EKIQKSGLRD LTTSRTPEAS VAAALSRDTK LFERVAPSTY CVRASYRKDA GDAETIFAEA RERIRAFKSG ITDVEDVDDA
0801: ERDEDSESDV GEDPEVDVNL KKEDPNPLKV ENLIGVEPLL ENGKLDTVPM KTELGLPLTP SLPEEMKDEK RDDTLADQSL EDAVANGEDS ACFDESKLGE
0901: QWVQGLVEGD YSNLSSEERL NALVALIGIA TEGNTIRIAL EERLEVASAL KKQMWGEVQL DKRWKEESLI RANYLSYPTA KPGLNIATPA SGNQESSSAD
1001: VTPISSQDPV SLPQIDVNNV IAGPSLQLQE NVPGVENLQY QQQQGYTADR ERLRAQLKAY VGYKAEELYV YRSLPLGQDR RRNRYWRFSA SASRNDPGCG
1101: RIFVELQDGR WRLIDSEEAF DYLVKSLDVR GVRESHLHFM LLKIEASFKE ALRRNVAANP GVCSISSSLD SDTAEISTTF KIELGDSNAV ERCSVLQRFH
1201: SFEKWMWDNM LHPSALSAFK YGAKQSSPLF RICRICAELH FVGDICCPSC GQMHAGPDVG ELCFAEQVAQ LGDNLRRGDT GFILRSSILS PLRIRLLKVQ
1301: LALVEASLPP EGLEAFWTEN LRKSWGMKLL SSSSHEDLYQ VLTTLEAALK RDFLSSNFET TSELLGLQEG ALASDLTCGV NVLPWIPKTA GGVALRLFDF
1401: DSSIVYTPDQ NNDPLKDKES EDFVGLETNI LRNLHEKDVM ETPVQVAAYK QEENWTDPGL GGVSSSGRGG RPPRGRGRPR ARGNGKKPAV SVKPPRGAAN
1501: SNGETMLRPR AQPRGGRKNG RRSGTKGRKR PTQGTLGICN EVGGGRRVKE VAVTAKTSLP DNDDDWIETP ELQDDDGEAS SSGRSFQYED YDDDDVMAPI
1601: DDFDGGGESS KLVGRGEFSL HSDDEYEEEE EEEEDMNMKM DVNVVDDEDE DYINEDSYGR KQHGISISND AATRKRFNKF EDPDLTSSSS SDFQ
0101: AGDLVAGNEL DSRRAARGSG GSGVTVVRRF NEPSSAEVRA IGYVEAQLGE RLRDNGPVLG MEFDPLPPGA FGMPIEMPSH RKATRQAFET NIYVRSDVKP
0201: IKDHVRPIRE YQFIPELPSS RTDHSERVSP SHHFGVPLDG SVMRVSAVSA GHRDDYKISP QIPNLNLATH QGKPGHVYSP NLVEYDSPYQ KSYMDTAAQV
0301: HDDPFVKSER EVGNEDEDDD ALQLERHRKN EEARIAREVE AHEKRIRREL EKQDMLRRKR EEQIRKEMER QDRERRKEEE RLLREKQREE ERYLKEQMRE
0401: LQRREKFLKK ETIRAEKMRQ KEEMRKEKEV ARLKAANERA IARKIAKESM ELIEDERLEL MEVAALTKGL PSMLALDFET LQNLDEYRDK QAIFPPTSVK
0501: LKKPFAVKPW NGSDENVANL LMVWRFLITF ADVLGLWPFT LDEFAQAFHD YDPRLMGEIH IVLLKTIIKD IEGVVRTLST GVGANQNVAA NPGGGHPHVV
0601: EGAYAWGFDI RSWRKNLNVF TWPEILRQLA LSAGLGPQLK KMNIRTVSVH DDNEANNSEN VIFNLRKGVA AENAFAKMQE RGLSNPRRSR HRLTPGTVKF
0701: AAFHVLSLEG EKGLNILEVA EKIQKSGLRD LTTSRTPEAS VAAALSRDTK LFERVAPSTY CVRASYRKDA GDAETIFAEA RERIRAFKSG ITDVEDVDDA
0801: ERDEDSESDV GEDPEVDVNL KKEDPNPLKV ENLIGVEPLL ENGKLDTVPM KTELGLPLTP SLPEEMKDEK RDDTLADQSL EDAVANGEDS ACFDESKLGE
0901: QWVQGLVEGD YSNLSSEERL NALVALIGIA TEGNTIRIAL EERLEVASAL KKQMWGEVQL DKRWKEESLI RANYLSYPTA KPGLNIATPA SGNQESSSAD
1001: VTPISSQDPV SLPQIDVNNV IAGPSLQLQE NVPGVENLQY QQQQGYTADR ERLRAQLKAY VGYKAEELYV YRSLPLGQDR RRNRYWRFSA SASRNDPGCG
1101: RIFVELQDGR WRLIDSEEAF DYLVKSLDVR GVRESHLHFM LLKIEASFKE ALRRNVAANP GVCSISSSLD SDTAEISTTF KIELGDSNAV ERCSVLQRFH
1201: SFEKWMWDNM LHPSALSAFK YGAKQSSPLF RICRICAELH FVGDICCPSC GQMHAGPDVG ELCFAEQVAQ LGDNLRRGDT GFILRSSILS PLRIRLLKVQ
1301: LALVEASLPP EGLEAFWTEN LRKSWGMKLL SSSSHEDLYQ VLTTLEAALK RDFLSSNFET TSELLGLQEG ALASDLTCGV NVLPWIPKTA GGVALRLFDF
1401: DSSIVYTPDQ NNDPLKDKES EDFVGLETNI LRNLHEKDVM ETPVQVAAYK QEENWTDPGL GGVSSSGRGG RPPRGRGRPR ARGNGKKPAV SVKPPRGAAN
1501: SNGETMLRPR AQPRGGRKNG RRSGTKGRKR PTQGTLGICN EVGGGRRVKE VAVTAKTSLP DNDDDWIETP ELQDDDGEAS SSGRSFQYED YDDDDVMAPI
1601: DDFDGGGESS KLVGRGEFSL HSDDEYEEEE EEEEDMNMKM DVNVVDDEDE DYINEDSYGR KQHGISISND AATRKRFNKF EDPDLTSSSS SDFQ
Arabidopsis Description
RLT2Homeobox-DDT domain protein RLT2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFH1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.