Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- nucleus 2
- extracellular 3
- golgi 3
- plasma membrane 3
- endoplasmic reticulum 3
- vacuole 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G124800.1 | Wheat | nucleus | 96.76 | 98.53 |
| TraesCS2B01G147300.4 | Wheat | nucleus | 95.41 | 96.98 |
| TraesCS3B01G131700.9 | Wheat | nucleus | 92.16 | 92.83 |
| TraesCS3D01G114300.2 | Wheat | nucleus | 91.53 | 88.66 |
| HORVU2Hr1G021950.4 | Barley | nucleus, plastid | 93.87 | 87.71 |
| EER90701 | Sorghum | nucleus | 65.59 | 63.47 |
| Zm00001d034515_P002 | Maize | nucleus | 64.5 | 60.78 |
| GSMUA_Achr9P24830_001 | Banana | cytosol, nucleus, plasma membrane | 39.37 | 53.82 |
| VIT_07s0005g06050.t01 | Wine grape | extracellular | 11.17 | 46.79 |
| CDX89461 | Canola | cytosol, endoplasmic reticulum | 19.82 | 45.64 |
| PGSC0003DMT400002603 | Potato | cytosol | 35.32 | 45.63 |
| KRH60120 | Soybean | nucleus | 39.82 | 40.85 |
| VIT_19s0085g00350.t01 | Wine grape | nucleus | 43.6 | 40.84 |
| KRH41406 | Soybean | nucleus | 39.73 | 40.8 |
| GSMUA_Achr6P22010_001 | Banana | nucleus | 37.48 | 40.15 |
| AT4G12750.1 | Thale cress | nucleus | 40.09 | 39.84 |
| Solyc11g006200.1.1 | Tomato | nucleus | 38.02 | 39.07 |
| Bra014277.1-P | Field mustard | nucleus | 35.05 | 38.14 |
| CDY60841 | Canola | nucleus | 34.41 | 36.66 |
| CDY51255 | Canola | nucleus | 34.23 | 36.4 |
| TraesCS3D01G245800.2 | Wheat | nucleus | 23.78 | 14.23 |
| TraesCS1D01G403700.1 | Wheat | nucleus | 23.24 | 13.93 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:35.1 | InterPro:DDT_dom | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 |
| InterPro:IPR018501 | PFAM:PF00046 | PFAM:PF02791 | PFAM:PF15612 | PFAM:PF15613 | ScanProsite:PS00027 |
| PFscan:PS50071 | PFscan:PS50827 | PANTHER:PTHR10390 | PANTHER:PTHR10390:SF44 | SMART:SM00389 | SMART:SM00571 |
| SUPFAM:SSF46689 | SignalP:SignalP-noTM | EnsemblPlantsGene:TraesCS2D01G127700 | EnsemblPlants:TraesCS2D01G127700.1 | InterPro:WHIM1_dom | InterPro:WHIM2_dom |
| TIGR:cd00086 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr2D:-:74146345..74156641
Molecular Weight (calculated)
124555.0 Da
IEP (calculated)
7.411
GRAVY (calculated)
-0.495
Length
1110 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVFTVTRLLC ALIPNYGLLQ MMAKGFLAKS DNAGTKKSPL QIQMLESFYS EVQYPNPEDV TEYAASVGLT YNQVRIWFKD RRRKERRHME AAEVHMETQA
0101: SARSNWPRCS SSRSSNSSQS PMQDTTGHQS YQDQSVLKKR KIMSPTAQRS TLPFENNDPV RKHGKGKGLM TVWHAMYSQT AEIQDCSSFI DESGCLRSLR
0201: PFEDCGGKLA QRQTLPRKKV NKKSRPPPSK RKVPCGRVTD LTEHPSVECH LSVDESESSE LRTEQATLVD DEELELSELQ AGPNLLRCSA HLSSTGRHGC
0301: PLCKDLLARF PPPSVRMKQP FPTKPWESSP EMVKKLFQVV RFVYTHFGSM DVHPFTFDEF AQAFHDKDSS LLGKVHVSLL KLLMLNTERG SSSVFVPRSS
0401: KDSRFLSFLN FVREQEFDVN FWIKSLNSLT WVEILRQVLV ASGFGSDHHM LNRNFFNKEK NQMVKYGLHP RTLKGELFAL LSKKGSGGLK VAELAKSPQI
0501: IGLNLSGASE VEQLIFSTLS SDITLFEKIA PSAYRLRVDP RIKGKEDPRS DTEDSGTVDD DRDASSSGDE SDGPQESYAE HESRIVRWRQ KNVHKNMNKC
0601: SEIDESYSGE RWLLGLMEGE YSDLSIDEKL DCLVALIDVV SGAGSVPRLE EPQSVLSSIQ RAQSHASGGK IKKCTRTIYQ SSDEYLNRPG SSHSFDSSMQ
0701: GQSGSLRSRD YIAYSGANES PTGFAHQPQI VLLGSDRRYN NYWLFLGPCR ADDPGHRRVY FESSEDGHWE VIDSPQDLLS LLSVLDIRGT REAHLLASMK
0801: KRQSCLFEGM KKHLEDGCVV ALTASSDSSH SETSSGNRYS PKPSSGDGAS PLSDIDSASV PTYLAGNLQN ASSAIGIEVG RRSDEKMSKW ERLQALDKWI
0901: WTSFYSSLTA VKCGKRSFKE SLVHCESCHD LYWRDEKHCR ICHSTFEVGF DLEERYAIHV ATCREPEDLY DVPNHKVLPS QLQALKAAIH AIEALMPTAA
1001: FAGLWMKSSH NLWVKRLRRT SSLPELLQVL VDFVGAIDED WLYQSSSVVS FSSYLDDITV YFQTMPQTTS AVALWVVKLD ALIAPHFAQA DSGRGLGKGS
1101: IQTRSQACLR
0101: SARSNWPRCS SSRSSNSSQS PMQDTTGHQS YQDQSVLKKR KIMSPTAQRS TLPFENNDPV RKHGKGKGLM TVWHAMYSQT AEIQDCSSFI DESGCLRSLR
0201: PFEDCGGKLA QRQTLPRKKV NKKSRPPPSK RKVPCGRVTD LTEHPSVECH LSVDESESSE LRTEQATLVD DEELELSELQ AGPNLLRCSA HLSSTGRHGC
0301: PLCKDLLARF PPPSVRMKQP FPTKPWESSP EMVKKLFQVV RFVYTHFGSM DVHPFTFDEF AQAFHDKDSS LLGKVHVSLL KLLMLNTERG SSSVFVPRSS
0401: KDSRFLSFLN FVREQEFDVN FWIKSLNSLT WVEILRQVLV ASGFGSDHHM LNRNFFNKEK NQMVKYGLHP RTLKGELFAL LSKKGSGGLK VAELAKSPQI
0501: IGLNLSGASE VEQLIFSTLS SDITLFEKIA PSAYRLRVDP RIKGKEDPRS DTEDSGTVDD DRDASSSGDE SDGPQESYAE HESRIVRWRQ KNVHKNMNKC
0601: SEIDESYSGE RWLLGLMEGE YSDLSIDEKL DCLVALIDVV SGAGSVPRLE EPQSVLSSIQ RAQSHASGGK IKKCTRTIYQ SSDEYLNRPG SSHSFDSSMQ
0701: GQSGSLRSRD YIAYSGANES PTGFAHQPQI VLLGSDRRYN NYWLFLGPCR ADDPGHRRVY FESSEDGHWE VIDSPQDLLS LLSVLDIRGT REAHLLASMK
0801: KRQSCLFEGM KKHLEDGCVV ALTASSDSSH SETSSGNRYS PKPSSGDGAS PLSDIDSASV PTYLAGNLQN ASSAIGIEVG RRSDEKMSKW ERLQALDKWI
0901: WTSFYSSLTA VKCGKRSFKE SLVHCESCHD LYWRDEKHCR ICHSTFEVGF DLEERYAIHV ATCREPEDLY DVPNHKVLPS QLQALKAAIH AIEALMPTAA
1001: FAGLWMKSSH NLWVKRLRRT SSLPELLQVL VDFVGAIDED WLYQSSSVVS FSSYLDDITV YFQTMPQTTS AVALWVVKLD ALIAPHFAQA DSGRGLGKGS
1101: IQTRSQACLR
0001: MKRKSPLQVQ ALEGFYLEQM YPTPKEMEDL GKSLGLTLKE VRGWFKRRRS RGKGVKSMAN DGLGAKNPQL YDRSLMRSST SSRCVGVAVE ERCIVGTRKA
0101: SCQNLLPSSH ILAKVFRKDG PSLGSEFDHL PSGARKASWL GTSSVGQQKQ KVARKRKISE LMDHTSQDCI QENATVMKHG IGKGLMTVWR VMNPNRRDVS
0201: PCVDLLDERA TLPQSSARNP PHQKKKQRQL ASILKQKLLQ KRSTEKKRRS IHREAELNKD ETQREFKENC ELAADGEVFK ETCQTISTLV DDEELEMRER
0301: HERGNPLTCS CHHPSSGSHG CFLCKDLLPK FPPNSVQMRM PFGLHPWNSS PESVKKLFKV VHFLYTYSVT LDIGPFTLDE FTRAFHDKDS LLLGKIHLSL
0401: LKLLLLDVET ELERGSFSNL SISCKFLALL QSVESQILIL DMWRNSLNSL TWTELLRQIL VAAGYGSLKC AVQSEELSKE RKLMKKYGLR LGTLKGELFR
0501: MLNGQGNNGL KISELADAPE VAVLNLATVP EERENSICST LASDITLFEK ISESTYRVRV NCFSEDPDKS QSDSDDSGSV DDESDDCSIS SGDEIEHVSE
0601: NPALRKVKCR KRRKHKSKMR EVCSEIDESH PGEPWLLGLM EGEYSDLSVE EKLDVFVALI DLLSSGSTIR MEDLPRAVAD CAPSIYSHGS GGKIKRSSSN
0701: QYSYPRGSWV HGGELYGIKA LSKSSDSHPV DSSSIVGAFA KLAGNRANNV HPMQSVYLGS DRRFNRYWLF LGTCNANDPG HRCVFFESSE DGHWEVINNK
0801: EALRALLSVL DDRGRREARL IESLEKRESF LCQAMLSRQV TQSETAHFTD IVREDSSSPV SDIDNNLCLN EIANDQFSSQ HAAIVFEIGS KREKSLLWSL
0901: IQEFDDWIWA NFNFNLNSVK HRRRSYLDSL TRCKSCHDLY WRDEKHCKIC HATFEVDIDL EERYAIHAAT CMRKEECDTF PDHKVLSSQL QSLKAAVYAI
1001: ESAMPEDALI GAWRKSAHRL WAKRLRRSSS VSEITQVIGD FVGAINEEWL WHCSDQGQTL MGEIINCFPS MPQTTSAIAL WLVKLDTLIA PYVEKAPPER
1101: DQPLCRTRNT SRRASKR
0101: SCQNLLPSSH ILAKVFRKDG PSLGSEFDHL PSGARKASWL GTSSVGQQKQ KVARKRKISE LMDHTSQDCI QENATVMKHG IGKGLMTVWR VMNPNRRDVS
0201: PCVDLLDERA TLPQSSARNP PHQKKKQRQL ASILKQKLLQ KRSTEKKRRS IHREAELNKD ETQREFKENC ELAADGEVFK ETCQTISTLV DDEELEMRER
0301: HERGNPLTCS CHHPSSGSHG CFLCKDLLPK FPPNSVQMRM PFGLHPWNSS PESVKKLFKV VHFLYTYSVT LDIGPFTLDE FTRAFHDKDS LLLGKIHLSL
0401: LKLLLLDVET ELERGSFSNL SISCKFLALL QSVESQILIL DMWRNSLNSL TWTELLRQIL VAAGYGSLKC AVQSEELSKE RKLMKKYGLR LGTLKGELFR
0501: MLNGQGNNGL KISELADAPE VAVLNLATVP EERENSICST LASDITLFEK ISESTYRVRV NCFSEDPDKS QSDSDDSGSV DDESDDCSIS SGDEIEHVSE
0601: NPALRKVKCR KRRKHKSKMR EVCSEIDESH PGEPWLLGLM EGEYSDLSVE EKLDVFVALI DLLSSGSTIR MEDLPRAVAD CAPSIYSHGS GGKIKRSSSN
0701: QYSYPRGSWV HGGELYGIKA LSKSSDSHPV DSSSIVGAFA KLAGNRANNV HPMQSVYLGS DRRFNRYWLF LGTCNANDPG HRCVFFESSE DGHWEVINNK
0801: EALRALLSVL DDRGRREARL IESLEKRESF LCQAMLSRQV TQSETAHFTD IVREDSSSPV SDIDNNLCLN EIANDQFSSQ HAAIVFEIGS KREKSLLWSL
0901: IQEFDDWIWA NFNFNLNSVK HRRRSYLDSL TRCKSCHDLY WRDEKHCKIC HATFEVDIDL EERYAIHAAT CMRKEECDTF PDHKVLSSQL QSLKAAVYAI
1001: ESAMPEDALI GAWRKSAHRL WAKRLRRSSS VSEITQVIGD FVGAINEEWL WHCSDQGQTL MGEIINCFPS MPQTTSAIAL WLVKLDTLIA PYVEKAPPER
1101: DQPLCRTRNT SRRASKR
Arabidopsis Description
Homeodomain-like transcriptional regulator [Source:TAIR;Acc:AT4G12750]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.