Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH60120 | Soybean | nucleus | 86.12 | 86.04 |
| CDX89461 | Canola | cytosol, endoplasmic reticulum | 24.79 | 55.6 |
| VIT_07s0005g06050.t01 | Wine grape | extracellular | 13.04 | 53.21 |
| PGSC0003DMT400002603 | Potato | cytosol | 40.8 | 51.34 |
| VIT_19s0085g00350.t01 | Wine grape | nucleus | 53.28 | 48.61 |
| GSMUA_Achr9P24830_001 | Banana | cytosol, nucleus, plasma membrane | 35.99 | 47.91 |
| Bra014277.1-P | Field mustard | nucleus | 43.02 | 45.59 |
| Solyc11g006200.1.1 | Tomato | nucleus | 45.33 | 45.37 |
| AT4G12750.1 | Thale cress | nucleus | 46.07 | 44.58 |
| CDY51255 | Canola | nucleus | 42.83 | 44.35 |
| CDY60841 | Canola | nucleus | 42.55 | 44.15 |
| HORVU3Hr1G020400.11 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 30.53 | 44.12 |
| TraesCS3A01G112300.2 | Wheat | nucleus | 40.61 | 40.39 |
| TraesCS2A01G124800.1 | Wheat | nucleus | 40.61 | 40.28 |
| TraesCS2B01G147300.4 | Wheat | nucleus | 40.61 | 40.2 |
| EER90701 | Sorghum | nucleus | 42.18 | 39.76 |
| TraesCS2D01G127700.1 | Wheat | vacuole | 40.8 | 39.73 |
| TraesCS3B01G131700.9 | Wheat | nucleus | 40.33 | 39.56 |
| TraesCS3D01G114300.2 | Wheat | nucleus | 41.81 | 39.44 |
| Zm00001d034515_P002 | Maize | nucleus | 42.55 | 39.05 |
| HORVU2Hr1G021950.4 | Barley | nucleus, plastid | 40.43 | 36.78 |
| GSMUA_Achr6P22010_001 | Banana | nucleus | 33.95 | 35.42 |
| KRH21359 | Soybean | nucleus | 25.53 | 15.73 |
| KRH50116 | Soybean | nucleus | 25.44 | 15.43 |
| KRH20389 | Soybean | nucleus | 25.35 | 15.26 |
| KRH55891 | Soybean | nucleus | 24.79 | 15.05 |
| KRH45931 | Soybean | nucleus | 5.83 | 11.75 |
| KRH14573 | Soybean | nucleus | 5.64 | 11.57 |
| KRG99068 | Soybean | nucleus | 5.64 | 11.57 |
| KRH73554 | Soybean | nucleus | 5.46 | 11.22 |
| KRH62715 | Soybean | nucleus | 2.78 | 11.15 |
Protein Annotations
| EMBL:ACUP02004764 | EnsemblPlants:KRH41406 | EnsemblPlantsGene:GLYMA_08G028000 | EntrezGene:100792062 | InterPro:DDT_dom | InterPro:IPR018501 |
| InterPro:WHIM1_dom | InterPro:WHIM2_dom | PANTHER:PTHR10390 | PANTHER:PTHR10390:SF44 | PFAM:PF02791 | PFAM:PF15612 |
| PFAM:PF15613 | PFscan:PS50827 | ProteinID:KRH41406 | ProteinID:KRH41406.1 | SEG:seg | SMART:SM00571 |
| UniParc:UPI0002954541 | UniProt:K7L4N1 | MapMan:35.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr8:+:2239479..2248157
Molecular Weight (calculated)
121005.0 Da
IEP (calculated)
6.867
GRAVY (calculated)
-0.408
Length
1081 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEDYDSYIAQ SGRGENGLTV ASRACSRDEF RPRGGKVLSR VAAVAAARNG SSTSRYDMAV TSNVKKKQKR KGLQELFTTD YIVNSVLRKD GPPLGQEFDF
0101: LPSGPKYFIS ACEEDQGSSK RRKVPNSATR SLADCNMKAP VKKHGIGKGL MTVWRATNPD IGDLPFGFGV SGQEVPLISN STGPKPVREN RSWKTVNRNG
0201: TPKSKMQNKR NKSQDKRKLT MQRRVGDLNL NVTQNQSPKE KCELALDSAI SEEGVDRISV LFDDEELELR ELQEGTNLFM CCDHLAAGGM VGCSLCKDVL
0301: VKFPPDIVKM KKPIHLQPWD SSPEIVKKLF KVFHFIYTYA IIVDICPFTL DEFVQAFHDK DSMLLGKIHV ALLTLLVSDI EVELTNGFSP HLNKSCNFLA
0401: LLHSVESQEY SLDFWRRSLN SLTWIEILHQ VLVASGFGSK QGSLRGEVLN KELNLLVNYG LCPGTLKSEL FNILSERGNI GCKVAELAKS MQIAELNLAS
0501: TPEELESLIC STLSSDITLF EKISSTAYRL RMSTVMKDGD ESHSDTEDFG SVDDELNDTD TCSSGDDFES DPINSSIRKL KRASSHKNNM LKVYTEIDES
0601: HPGEAWLLGL MESEYSDLNI EEKLNALAAL TDLVSSGSSI RMKDSTKVAA DCNSSIQLQG SGAKIKRSAV KKPGPLWNQK LHLNSDPCTV DSSSLISRLH
0701: SREASFEKGK GSSISHPIQS VFLGSDRRYN RYWLFLGPCN VDDPGHRRIY FESSEDGHWE VIDTEEALCA LLSVLDDRGN REALLIESLE RRQASLCRSM
0801: SRINVNSTGK GSMSHSDQSE LDMVTDDSYS PASDVDNLNL TETAKDSLPS AGAVVIKAGK KGEEQIKKWI RVQEYDTWIW NSFYSDLNVV KYGKRSYLDS
0901: LARCKSCHDL YWRDERHCKI CHMTFELDFD LEERYAIHIA TCREKEDSNT FPNHKVLPSQ IQSLKAAVYA IESVMPEDAL VGAWRKSAHK LWVKRLRRTS
1001: TLVELLQVLA DFVGAINKDW LFQCKFPHGL VEEIIASFAS MPHTSSALAL WLVKLDAIIA PYLDRVHLQK KQGTSQHGPW R
0101: LPSGPKYFIS ACEEDQGSSK RRKVPNSATR SLADCNMKAP VKKHGIGKGL MTVWRATNPD IGDLPFGFGV SGQEVPLISN STGPKPVREN RSWKTVNRNG
0201: TPKSKMQNKR NKSQDKRKLT MQRRVGDLNL NVTQNQSPKE KCELALDSAI SEEGVDRISV LFDDEELELR ELQEGTNLFM CCDHLAAGGM VGCSLCKDVL
0301: VKFPPDIVKM KKPIHLQPWD SSPEIVKKLF KVFHFIYTYA IIVDICPFTL DEFVQAFHDK DSMLLGKIHV ALLTLLVSDI EVELTNGFSP HLNKSCNFLA
0401: LLHSVESQEY SLDFWRRSLN SLTWIEILHQ VLVASGFGSK QGSLRGEVLN KELNLLVNYG LCPGTLKSEL FNILSERGNI GCKVAELAKS MQIAELNLAS
0501: TPEELESLIC STLSSDITLF EKISSTAYRL RMSTVMKDGD ESHSDTEDFG SVDDELNDTD TCSSGDDFES DPINSSIRKL KRASSHKNNM LKVYTEIDES
0601: HPGEAWLLGL MESEYSDLNI EEKLNALAAL TDLVSSGSSI RMKDSTKVAA DCNSSIQLQG SGAKIKRSAV KKPGPLWNQK LHLNSDPCTV DSSSLISRLH
0701: SREASFEKGK GSSISHPIQS VFLGSDRRYN RYWLFLGPCN VDDPGHRRIY FESSEDGHWE VIDTEEALCA LLSVLDDRGN REALLIESLE RRQASLCRSM
0801: SRINVNSTGK GSMSHSDQSE LDMVTDDSYS PASDVDNLNL TETAKDSLPS AGAVVIKAGK KGEEQIKKWI RVQEYDTWIW NSFYSDLNVV KYGKRSYLDS
0901: LARCKSCHDL YWRDERHCKI CHMTFELDFD LEERYAIHIA TCREKEDSNT FPNHKVLPSQ IQSLKAAVYA IESVMPEDAL VGAWRKSAHK LWVKRLRRTS
1001: TLVELLQVLA DFVGAINKDW LFQCKFPHGL VEEIIASFAS MPHTSSALAL WLVKLDAIIA PYLDRVHLQK KQGTSQHGPW R
0001: MKRKSPLQVQ ALEGFYLEQM YPTPKEMEDL GKSLGLTLKE VRGWFKRRRS RGKGVKSMAN DGLGAKNPQL YDRSLMRSST SSRCVGVAVE ERCIVGTRKA
0101: SCQNLLPSSH ILAKVFRKDG PSLGSEFDHL PSGARKASWL GTSSVGQQKQ KVARKRKISE LMDHTSQDCI QENATVMKHG IGKGLMTVWR VMNPNRRDVS
0201: PCVDLLDERA TLPQSSARNP PHQKKKQRQL ASILKQKLLQ KRSTEKKRRS IHREAELNKD ETQREFKENC ELAADGEVFK ETCQTISTLV DDEELEMRER
0301: HERGNPLTCS CHHPSSGSHG CFLCKDLLPK FPPNSVQMRM PFGLHPWNSS PESVKKLFKV VHFLYTYSVT LDIGPFTLDE FTRAFHDKDS LLLGKIHLSL
0401: LKLLLLDVET ELERGSFSNL SISCKFLALL QSVESQILIL DMWRNSLNSL TWTELLRQIL VAAGYGSLKC AVQSEELSKE RKLMKKYGLR LGTLKGELFR
0501: MLNGQGNNGL KISELADAPE VAVLNLATVP EERENSICST LASDITLFEK ISESTYRVRV NCFSEDPDKS QSDSDDSGSV DDESDDCSIS SGDEIEHVSE
0601: NPALRKVKCR KRRKHKSKMR EVCSEIDESH PGEPWLLGLM EGEYSDLSVE EKLDVFVALI DLLSSGSTIR MEDLPRAVAD CAPSIYSHGS GGKIKRSSSN
0701: QYSYPRGSWV HGGELYGIKA LSKSSDSHPV DSSSIVGAFA KLAGNRANNV HPMQSVYLGS DRRFNRYWLF LGTCNANDPG HRCVFFESSE DGHWEVINNK
0801: EALRALLSVL DDRGRREARL IESLEKRESF LCQAMLSRQV TQSETAHFTD IVREDSSSPV SDIDNNLCLN EIANDQFSSQ HAAIVFEIGS KREKSLLWSL
0901: IQEFDDWIWA NFNFNLNSVK HRRRSYLDSL TRCKSCHDLY WRDEKHCKIC HATFEVDIDL EERYAIHAAT CMRKEECDTF PDHKVLSSQL QSLKAAVYAI
1001: ESAMPEDALI GAWRKSAHRL WAKRLRRSSS VSEITQVIGD FVGAINEEWL WHCSDQGQTL MGEIINCFPS MPQTTSAIAL WLVKLDTLIA PYVEKAPPER
1101: DQPLCRTRNT SRRASKR
0101: SCQNLLPSSH ILAKVFRKDG PSLGSEFDHL PSGARKASWL GTSSVGQQKQ KVARKRKISE LMDHTSQDCI QENATVMKHG IGKGLMTVWR VMNPNRRDVS
0201: PCVDLLDERA TLPQSSARNP PHQKKKQRQL ASILKQKLLQ KRSTEKKRRS IHREAELNKD ETQREFKENC ELAADGEVFK ETCQTISTLV DDEELEMRER
0301: HERGNPLTCS CHHPSSGSHG CFLCKDLLPK FPPNSVQMRM PFGLHPWNSS PESVKKLFKV VHFLYTYSVT LDIGPFTLDE FTRAFHDKDS LLLGKIHLSL
0401: LKLLLLDVET ELERGSFSNL SISCKFLALL QSVESQILIL DMWRNSLNSL TWTELLRQIL VAAGYGSLKC AVQSEELSKE RKLMKKYGLR LGTLKGELFR
0501: MLNGQGNNGL KISELADAPE VAVLNLATVP EERENSICST LASDITLFEK ISESTYRVRV NCFSEDPDKS QSDSDDSGSV DDESDDCSIS SGDEIEHVSE
0601: NPALRKVKCR KRRKHKSKMR EVCSEIDESH PGEPWLLGLM EGEYSDLSVE EKLDVFVALI DLLSSGSTIR MEDLPRAVAD CAPSIYSHGS GGKIKRSSSN
0701: QYSYPRGSWV HGGELYGIKA LSKSSDSHPV DSSSIVGAFA KLAGNRANNV HPMQSVYLGS DRRFNRYWLF LGTCNANDPG HRCVFFESSE DGHWEVINNK
0801: EALRALLSVL DDRGRREARL IESLEKRESF LCQAMLSRQV TQSETAHFTD IVREDSSSPV SDIDNNLCLN EIANDQFSSQ HAAIVFEIGS KREKSLLWSL
0901: IQEFDDWIWA NFNFNLNSVK HRRRSYLDSL TRCKSCHDLY WRDEKHCKIC HATFEVDIDL EERYAIHAAT CMRKEECDTF PDHKVLSSQL QSLKAAVYAI
1001: ESAMPEDALI GAWRKSAHRL WAKRLRRSSS VSEITQVIGD FVGAINEEWL WHCSDQGQTL MGEIINCFPS MPQTTSAIAL WLVKLDTLIA PYVEKAPPER
1101: DQPLCRTRNT SRRASKR
Arabidopsis Description
Homeodomain-like transcriptional regulator [Source:TAIR;Acc:AT4G12750]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.