Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400002603 | Potato | cytosol | 72.22 | 90.8 |
| CDX89461 | Canola | cytosol, endoplasmic reticulum | 22.69 | 50.83 |
| VIT_07s0005g06050.t01 | Wine grape | extracellular | 12.04 | 49.06 |
| KRH41406 | Soybean | nucleus | 45.37 | 45.33 |
| VIT_19s0085g00350.t01 | Wine grape | nucleus | 49.26 | 44.89 |
| KRH60120 | Soybean | nucleus | 44.63 | 44.55 |
| GSMUA_Achr9P24830_001 | Banana | cytosol, nucleus, plasma membrane | 33.15 | 44.09 |
| Bra014277.1-P | Field mustard | nucleus | 39.81 | 42.16 |
| HORVU3Hr1G020400.11 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 28.24 | 40.78 |
| CDY60841 | Canola | nucleus | 39.17 | 40.59 |
| AT4G12750.1 | Thale cress | nucleus | 41.94 | 40.56 |
| CDY51255 | Canola | nucleus | 38.7 | 40.04 |
| TraesCS3A01G112300.2 | Wheat | nucleus | 39.17 | 38.91 |
| TraesCS2A01G124800.1 | Wheat | nucleus | 39.26 | 38.9 |
| TraesCS2B01G147300.4 | Wheat | nucleus | 38.89 | 38.46 |
| TraesCS3B01G131700.9 | Wheat | nucleus | 38.8 | 38.02 |
| TraesCS2D01G127700.1 | Wheat | vacuole | 39.07 | 38.02 |
| TraesCS3D01G114300.2 | Wheat | nucleus | 40.28 | 37.96 |
| EER90701 | Sorghum | nucleus | 39.35 | 37.05 |
| Zm00001d034515_P002 | Maize | nucleus | 40.09 | 36.76 |
| HORVU2Hr1G021950.4 | Barley | nucleus, plastid | 39.07 | 35.52 |
| GSMUA_Achr6P22010_001 | Banana | nucleus | 33.33 | 34.75 |
| Solyc02g077660.2.1 | Tomato | nucleus | 23.52 | 15.14 |
| Solyc07g053610.2.1 | Tomato | nucleus | 24.26 | 14.7 |
| Solyc12g099760.1.1 | Tomato | nucleus | 5.74 | 11.92 |
| Solyc11g065110.1.1 | Tomato | nucleus | 5.0 | 10.44 |
Protein Annotations
Description
No Description!
Coordinates
chr11:+:943924..954285
Molecular Weight (calculated)
121277.0 Da
IEP (calculated)
8.035
GRAVY (calculated)
-0.435
Length
1080 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAKKKKQNQ NPKKSGKKKQ QQQLFLSEDD YRLRLQEGLY SPDYILAKIF RKDGPTLGDE FDILPSNAFS HLKKGSRISG QARQENQGAT KRRKVSVPAT
0101: MHCRALCESN PPVKKHGTGK GLITKDVSVK KHSAGKRLMT EKRATLRNHG MGKGLMTVWR ATNPHSGDIP VGVDFGESAE ERKKKLLQRQ SILRKIEKKL
0201: QDKKKVGVKC RKAENKRIEK QKMPRKEKCE LALEWRKCQE GLPIKKRNYQ QEFTQLGSLV DDEELELMEL EEGPNSLTCC THFASNGLRG CSLCKGLLPK
0301: FPPNSVIMKL PLYERPWDSS PELAKKLFKV FHFLCTYAAR INICSFTIDE FAQAFHEKDS LILGQVHLAF LRLLLADVEI QLNKGFIHQA SRSCNFLGLV
0401: HSIEHEEFSL ELCISSLNAL TWTEILRQVL VAAGFGSKRG RVPGEALCKE RSLMAKYGLA LGTLKGELFS ILLIKGTAGM KVHELAKLQS ILELNLAATT
0501: IQLEDLISST LSSDITLFEK ISSSGYRLRI NPSSQESEIC FSDSEGDEAE VISGYMRDNS ECESRELVRA ESERSYHQFE NRNNLSTLNT EIDESYSGEA
0601: WLLGLMEGEY SDLSIEEKLN ALVALVDLLI AASSITEKDS MPSVVECAPA TIHHASGGKI KRSSAKSSYL TGHVQSHKGQ LSNQDPTVSL ELQSVDSSVS
0701: MSKLCEKNKS PRTAKNAKEL KAGDELHPMQ SIFLGSDRRY NRYWIFLGPC NELDPGHRRI YFESSEDGHW EVIDTEESLC SLSAALDRRG IREALLVASL
0801: EKRETFLCQA MSNALNDSGD SQSPRCGRNF SREDSSSSAV SDVDNLSLVE VHNGSIGQKV PVGRKGEHQQ DKWNIAQAFD TWIWKSFYCN LAAVKLGKRS
0901: YLDSLARCEQ CHDLYWRDEK HCRICHTTFE LDFDLEEKYA IHTATCRQNL DTDKLSKHKI LPSELQSLKA AIHAIESVMP EGALIGAWRR SSHNLWIKRL
1001: RRASTLSEIL QVLADFVTAI NEDWLCESGH TLGLNYDPED IIASFSSMPR TSSAVAFWLV KLDALIAPHL ESVPISTIQV
0101: MHCRALCESN PPVKKHGTGK GLITKDVSVK KHSAGKRLMT EKRATLRNHG MGKGLMTVWR ATNPHSGDIP VGVDFGESAE ERKKKLLQRQ SILRKIEKKL
0201: QDKKKVGVKC RKAENKRIEK QKMPRKEKCE LALEWRKCQE GLPIKKRNYQ QEFTQLGSLV DDEELELMEL EEGPNSLTCC THFASNGLRG CSLCKGLLPK
0301: FPPNSVIMKL PLYERPWDSS PELAKKLFKV FHFLCTYAAR INICSFTIDE FAQAFHEKDS LILGQVHLAF LRLLLADVEI QLNKGFIHQA SRSCNFLGLV
0401: HSIEHEEFSL ELCISSLNAL TWTEILRQVL VAAGFGSKRG RVPGEALCKE RSLMAKYGLA LGTLKGELFS ILLIKGTAGM KVHELAKLQS ILELNLAATT
0501: IQLEDLISST LSSDITLFEK ISSSGYRLRI NPSSQESEIC FSDSEGDEAE VISGYMRDNS ECESRELVRA ESERSYHQFE NRNNLSTLNT EIDESYSGEA
0601: WLLGLMEGEY SDLSIEEKLN ALVALVDLLI AASSITEKDS MPSVVECAPA TIHHASGGKI KRSSAKSSYL TGHVQSHKGQ LSNQDPTVSL ELQSVDSSVS
0701: MSKLCEKNKS PRTAKNAKEL KAGDELHPMQ SIFLGSDRRY NRYWIFLGPC NELDPGHRRI YFESSEDGHW EVIDTEESLC SLSAALDRRG IREALLVASL
0801: EKRETFLCQA MSNALNDSGD SQSPRCGRNF SREDSSSSAV SDVDNLSLVE VHNGSIGQKV PVGRKGEHQQ DKWNIAQAFD TWIWKSFYCN LAAVKLGKRS
0901: YLDSLARCEQ CHDLYWRDEK HCRICHTTFE LDFDLEEKYA IHTATCRQNL DTDKLSKHKI LPSELQSLKA AIHAIESVMP EGALIGAWRR SSHNLWIKRL
1001: RRASTLSEIL QVLADFVTAI NEDWLCESGH TLGLNYDPED IIASFSSMPR TSSAVAFWLV KLDALIAPHL ESVPISTIQV
0001: MKRKSPLQVQ ALEGFYLEQM YPTPKEMEDL GKSLGLTLKE VRGWFKRRRS RGKGVKSMAN DGLGAKNPQL YDRSLMRSST SSRCVGVAVE ERCIVGTRKA
0101: SCQNLLPSSH ILAKVFRKDG PSLGSEFDHL PSGARKASWL GTSSVGQQKQ KVARKRKISE LMDHTSQDCI QENATVMKHG IGKGLMTVWR VMNPNRRDVS
0201: PCVDLLDERA TLPQSSARNP PHQKKKQRQL ASILKQKLLQ KRSTEKKRRS IHREAELNKD ETQREFKENC ELAADGEVFK ETCQTISTLV DDEELEMRER
0301: HERGNPLTCS CHHPSSGSHG CFLCKDLLPK FPPNSVQMRM PFGLHPWNSS PESVKKLFKV VHFLYTYSVT LDIGPFTLDE FTRAFHDKDS LLLGKIHLSL
0401: LKLLLLDVET ELERGSFSNL SISCKFLALL QSVESQILIL DMWRNSLNSL TWTELLRQIL VAAGYGSLKC AVQSEELSKE RKLMKKYGLR LGTLKGELFR
0501: MLNGQGNNGL KISELADAPE VAVLNLATVP EERENSICST LASDITLFEK ISESTYRVRV NCFSEDPDKS QSDSDDSGSV DDESDDCSIS SGDEIEHVSE
0601: NPALRKVKCR KRRKHKSKMR EVCSEIDESH PGEPWLLGLM EGEYSDLSVE EKLDVFVALI DLLSSGSTIR MEDLPRAVAD CAPSIYSHGS GGKIKRSSSN
0701: QYSYPRGSWV HGGELYGIKA LSKSSDSHPV DSSSIVGAFA KLAGNRANNV HPMQSVYLGS DRRFNRYWLF LGTCNANDPG HRCVFFESSE DGHWEVINNK
0801: EALRALLSVL DDRGRREARL IESLEKRESF LCQAMLSRQV TQSETAHFTD IVREDSSSPV SDIDNNLCLN EIANDQFSSQ HAAIVFEIGS KREKSLLWSL
0901: IQEFDDWIWA NFNFNLNSVK HRRRSYLDSL TRCKSCHDLY WRDEKHCKIC HATFEVDIDL EERYAIHAAT CMRKEECDTF PDHKVLSSQL QSLKAAVYAI
1001: ESAMPEDALI GAWRKSAHRL WAKRLRRSSS VSEITQVIGD FVGAINEEWL WHCSDQGQTL MGEIINCFPS MPQTTSAIAL WLVKLDTLIA PYVEKAPPER
1101: DQPLCRTRNT SRRASKR
0101: SCQNLLPSSH ILAKVFRKDG PSLGSEFDHL PSGARKASWL GTSSVGQQKQ KVARKRKISE LMDHTSQDCI QENATVMKHG IGKGLMTVWR VMNPNRRDVS
0201: PCVDLLDERA TLPQSSARNP PHQKKKQRQL ASILKQKLLQ KRSTEKKRRS IHREAELNKD ETQREFKENC ELAADGEVFK ETCQTISTLV DDEELEMRER
0301: HERGNPLTCS CHHPSSGSHG CFLCKDLLPK FPPNSVQMRM PFGLHPWNSS PESVKKLFKV VHFLYTYSVT LDIGPFTLDE FTRAFHDKDS LLLGKIHLSL
0401: LKLLLLDVET ELERGSFSNL SISCKFLALL QSVESQILIL DMWRNSLNSL TWTELLRQIL VAAGYGSLKC AVQSEELSKE RKLMKKYGLR LGTLKGELFR
0501: MLNGQGNNGL KISELADAPE VAVLNLATVP EERENSICST LASDITLFEK ISESTYRVRV NCFSEDPDKS QSDSDDSGSV DDESDDCSIS SGDEIEHVSE
0601: NPALRKVKCR KRRKHKSKMR EVCSEIDESH PGEPWLLGLM EGEYSDLSVE EKLDVFVALI DLLSSGSTIR MEDLPRAVAD CAPSIYSHGS GGKIKRSSSN
0701: QYSYPRGSWV HGGELYGIKA LSKSSDSHPV DSSSIVGAFA KLAGNRANNV HPMQSVYLGS DRRFNRYWLF LGTCNANDPG HRCVFFESSE DGHWEVINNK
0801: EALRALLSVL DDRGRREARL IESLEKRESF LCQAMLSRQV TQSETAHFTD IVREDSSSPV SDIDNNLCLN EIANDQFSSQ HAAIVFEIGS KREKSLLWSL
0901: IQEFDDWIWA NFNFNLNSVK HRRRSYLDSL TRCKSCHDLY WRDEKHCKIC HATFEVDIDL EERYAIHAAT CMRKEECDTF PDHKVLSSQL QSLKAAVYAI
1001: ESAMPEDALI GAWRKSAHRL WAKRLRRSSS VSEITQVIGD FVGAINEEWL WHCSDQGQTL MGEIINCFPS MPQTTSAIAL WLVKLDTLIA PYVEKAPPER
1101: DQPLCRTRNT SRRASKR
Arabidopsis Description
Homeodomain-like transcriptional regulator [Source:TAIR;Acc:AT4G12750]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.