Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P24830_001 | Banana | cytosol, nucleus, plasma membrane | 37.55 | 47.91 |
| TraesCS2A01G124800.1 | Wheat | nucleus | 40.25 | 38.26 |
| TraesCS3A01G112300.2 | Wheat | nucleus | 40.06 | 38.18 |
| TraesCS2B01G147300.4 | Wheat | nucleus | 39.96 | 37.91 |
| TraesCS3D01G114300.2 | Wheat | nucleus | 41.7 | 37.7 |
| PGSC0003DMT400002603 | Potato | cytosol | 31.08 | 37.49 |
| TraesCS2D01G127700.1 | Wheat | vacuole | 40.15 | 37.48 |
| TraesCS3B01G131700.9 | Wheat | nucleus | 39.86 | 37.48 |
| EER90701 | Sorghum | nucleus | 40.15 | 36.27 |
| VIT_19s0085g00350.t01 | Wine grape | nucleus | 41.31 | 36.12 |
| Zm00001d034515_P002 | Maize | nucleus | 40.15 | 35.31 |
| CDX89461 | Canola | cytosol, endoplasmic reticulum | 16.31 | 35.06 |
| HORVU2Hr1G021950.4 | Barley | nucleus, plastid | 39.86 | 34.76 |
| VIT_07s0005g06050.t01 | Wine grape | extracellular | 8.88 | 34.72 |
| KRH41406 | Soybean | nucleus | 35.42 | 33.95 |
| KRH60120 | Soybean | nucleus | 35.23 | 33.73 |
| AT4G12750.1 | Thale cress | nucleus | 36.2 | 33.57 |
| Solyc11g006200.1.1 | Tomato | nucleus | 34.75 | 33.33 |
| HORVU3Hr1G020400.11 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 23.84 | 33.02 |
| Bra014277.1-P | Field mustard | nucleus | 31.47 | 31.96 |
| CDY51255 | Canola | nucleus | 30.5 | 30.27 |
| CDY60841 | Canola | nucleus | 30.21 | 30.04 |
| GSMUA_Achr9P06610_001 | Banana | nucleus | 23.46 | 13.71 |
| GSMUA_Achr8P27210_001 | Banana | nucleus | 24.13 | 13.1 |
| GSMUA_Achr6P26980_001 | Banana | nucleus | 24.32 | 11.23 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:35.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSMUA_Achr6G22010_001 |
| EnsemblPlants:GSMUA_Achr6P22010_001 | EnsemblPlants:GSMUA_Achr6T22010_001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | UniProt:M0T949 |
| PFAM:PF00046 | PFAM:PF15612 | PFAM:PF15613 | PFscan:PS50071 | PANTHER:PTHR36968 | SMART:SM00389 |
| SUPFAM:SSF46689 | UniParc:UPI00029635CB | InterPro:WHIM1_dom | InterPro:WHIM2_dom | SEG:seg | : |
Description
DDT domain containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G22010_001]
Coordinates
chr6:+:18731929..18741699
Molecular Weight (calculated)
119147.0 Da
IEP (calculated)
8.147
GRAVY (calculated)
-0.484
Length
1036 amino acids
Sequence
(BLAST)
(BLAST)
0001: MMLMTKKTME QREKTTCRLQ SLEKLYSEDK YPKQNKMEEY ASSLNLTYHQ IHGWFAERRR KDRRKNEALH SSIKSFPSSS SNAFKHTHGK CLNLSGHRRT
0101: AGTSRCAIKK MNQLVRQKCR YKDLEQLMKS HSGGRSNYAE KNHIFHLQIL FPEDHILKKI FCKHGPVLGI EIDPPGDAFG HSTEFEKLQS CHDNQRIPRR
0201: SKVSQNFKTL PEVNFHARKY GMGKGLMTVW HATRPNGQKR STVMSCTDRS SWMNVRSHVS HKATSSYVLK RLQQREPCMV NGLCLFLKIQ VPSKQDAIQQ
0301: EPHLRDFNLS LDESFEQSSE PRTLVDDEEL ELEELQEGPN PLRCSTHLAS NGRHGCSLCK DLLARFPPQT VKMKQLFCTR PWDSSPGLVK QLFKVTDFCP
0401: DMRTFTLDEF AQAFHDKDSL LLGIHVALLK LLMLNVEKET TAGFITPSSK ICRFLVFLDF VKQDFEVDHW KQSLGPLTWT EILWQVLVAA GFGSKQKAIQ
0501: RGNYNEERNP MEKYGLHPPT LKGDIFCLLS KQGNRGLKVS ELARASLHHP LHIVFELIRR LKEKVILNQI QRIQEVLVMT LRTQAHDSEE LDSSIQDLRI
0601: VMYKGQHKKM SKKLTVYTEI DESYSGEAWM QGLVEGEYSD LSIEEKLDAL VALIDLVALL SSFKLCSQIP VVFIKWRTFF LAVTYFCLSY QFSYSLFQVD
0701: FHDKTDCVLS LITNAWYHES GAKIKKSLTN YQVLPMSSLE GNGSRRGCRS SSSETNNCKD REACNDVHPL QSIFLGSDRR YNNYWLFLGP CSAHDPGHRR
0801: VHFESSEDGH WQIIDTAQAL HALLSILDSR GMRGLVASLE KRKSFLCQPM DEYMAAAIGS RQTNNFEPSY TTAGSGDGSS PTSDVHSVLI TSESLDNLSV
0901: VSGAIDLEIE RSSEEKKQKW ARLQAFDKWD WNSVYSTLNA VRYSKRSYME SLSHCVSCHD LFWRDEKYCE FCHTTFEIDF DLEERYAIHI ATCGEREDVK
1001: RLRRASSLPE LLQVLTDLVG AINEHWLYEC PTMGWL
0101: AGTSRCAIKK MNQLVRQKCR YKDLEQLMKS HSGGRSNYAE KNHIFHLQIL FPEDHILKKI FCKHGPVLGI EIDPPGDAFG HSTEFEKLQS CHDNQRIPRR
0201: SKVSQNFKTL PEVNFHARKY GMGKGLMTVW HATRPNGQKR STVMSCTDRS SWMNVRSHVS HKATSSYVLK RLQQREPCMV NGLCLFLKIQ VPSKQDAIQQ
0301: EPHLRDFNLS LDESFEQSSE PRTLVDDEEL ELEELQEGPN PLRCSTHLAS NGRHGCSLCK DLLARFPPQT VKMKQLFCTR PWDSSPGLVK QLFKVTDFCP
0401: DMRTFTLDEF AQAFHDKDSL LLGIHVALLK LLMLNVEKET TAGFITPSSK ICRFLVFLDF VKQDFEVDHW KQSLGPLTWT EILWQVLVAA GFGSKQKAIQ
0501: RGNYNEERNP MEKYGLHPPT LKGDIFCLLS KQGNRGLKVS ELARASLHHP LHIVFELIRR LKEKVILNQI QRIQEVLVMT LRTQAHDSEE LDSSIQDLRI
0601: VMYKGQHKKM SKKLTVYTEI DESYSGEAWM QGLVEGEYSD LSIEEKLDAL VALIDLVALL SSFKLCSQIP VVFIKWRTFF LAVTYFCLSY QFSYSLFQVD
0701: FHDKTDCVLS LITNAWYHES GAKIKKSLTN YQVLPMSSLE GNGSRRGCRS SSSETNNCKD REACNDVHPL QSIFLGSDRR YNNYWLFLGP CSAHDPGHRR
0801: VHFESSEDGH WQIIDTAQAL HALLSILDSR GMRGLVASLE KRKSFLCQPM DEYMAAAIGS RQTNNFEPSY TTAGSGDGSS PTSDVHSVLI TSESLDNLSV
0901: VSGAIDLEIE RSSEEKKQKW ARLQAFDKWD WNSVYSTLNA VRYSKRSYME SLSHCVSCHD LFWRDEKYCE FCHTTFEIDF DLEERYAIHI ATCGEREDVK
1001: RLRRASSLPE LLQVLTDLVG AINEHWLYEC PTMGWL
0001: MKRKSPLQVQ ALEGFYLEQM YPTPKEMEDL GKSLGLTLKE VRGWFKRRRS RGKGVKSMAN DGLGAKNPQL YDRSLMRSST SSRCVGVAVE ERCIVGTRKA
0101: SCQNLLPSSH ILAKVFRKDG PSLGSEFDHL PSGARKASWL GTSSVGQQKQ KVARKRKISE LMDHTSQDCI QENATVMKHG IGKGLMTVWR VMNPNRRDVS
0201: PCVDLLDERA TLPQSSARNP PHQKKKQRQL ASILKQKLLQ KRSTEKKRRS IHREAELNKD ETQREFKENC ELAADGEVFK ETCQTISTLV DDEELEMRER
0301: HERGNPLTCS CHHPSSGSHG CFLCKDLLPK FPPNSVQMRM PFGLHPWNSS PESVKKLFKV VHFLYTYSVT LDIGPFTLDE FTRAFHDKDS LLLGKIHLSL
0401: LKLLLLDVET ELERGSFSNL SISCKFLALL QSVESQILIL DMWRNSLNSL TWTELLRQIL VAAGYGSLKC AVQSEELSKE RKLMKKYGLR LGTLKGELFR
0501: MLNGQGNNGL KISELADAPE VAVLNLATVP EERENSICST LASDITLFEK ISESTYRVRV NCFSEDPDKS QSDSDDSGSV DDESDDCSIS SGDEIEHVSE
0601: NPALRKVKCR KRRKHKSKMR EVCSEIDESH PGEPWLLGLM EGEYSDLSVE EKLDVFVALI DLLSSGSTIR MEDLPRAVAD CAPSIYSHGS GGKIKRSSSN
0701: QYSYPRGSWV HGGELYGIKA LSKSSDSHPV DSSSIVGAFA KLAGNRANNV HPMQSVYLGS DRRFNRYWLF LGTCNANDPG HRCVFFESSE DGHWEVINNK
0801: EALRALLSVL DDRGRREARL IESLEKRESF LCQAMLSRQV TQSETAHFTD IVREDSSSPV SDIDNNLCLN EIANDQFSSQ HAAIVFEIGS KREKSLLWSL
0901: IQEFDDWIWA NFNFNLNSVK HRRRSYLDSL TRCKSCHDLY WRDEKHCKIC HATFEVDIDL EERYAIHAAT CMRKEECDTF PDHKVLSSQL QSLKAAVYAI
1001: ESAMPEDALI GAWRKSAHRL WAKRLRRSSS VSEITQVIGD FVGAINEEWL WHCSDQGQTL MGEIINCFPS MPQTTSAIAL WLVKLDTLIA PYVEKAPPER
1101: DQPLCRTRNT SRRASKR
0101: SCQNLLPSSH ILAKVFRKDG PSLGSEFDHL PSGARKASWL GTSSVGQQKQ KVARKRKISE LMDHTSQDCI QENATVMKHG IGKGLMTVWR VMNPNRRDVS
0201: PCVDLLDERA TLPQSSARNP PHQKKKQRQL ASILKQKLLQ KRSTEKKRRS IHREAELNKD ETQREFKENC ELAADGEVFK ETCQTISTLV DDEELEMRER
0301: HERGNPLTCS CHHPSSGSHG CFLCKDLLPK FPPNSVQMRM PFGLHPWNSS PESVKKLFKV VHFLYTYSVT LDIGPFTLDE FTRAFHDKDS LLLGKIHLSL
0401: LKLLLLDVET ELERGSFSNL SISCKFLALL QSVESQILIL DMWRNSLNSL TWTELLRQIL VAAGYGSLKC AVQSEELSKE RKLMKKYGLR LGTLKGELFR
0501: MLNGQGNNGL KISELADAPE VAVLNLATVP EERENSICST LASDITLFEK ISESTYRVRV NCFSEDPDKS QSDSDDSGSV DDESDDCSIS SGDEIEHVSE
0601: NPALRKVKCR KRRKHKSKMR EVCSEIDESH PGEPWLLGLM EGEYSDLSVE EKLDVFVALI DLLSSGSTIR MEDLPRAVAD CAPSIYSHGS GGKIKRSSSN
0701: QYSYPRGSWV HGGELYGIKA LSKSSDSHPV DSSSIVGAFA KLAGNRANNV HPMQSVYLGS DRRFNRYWLF LGTCNANDPG HRCVFFESSE DGHWEVINNK
0801: EALRALLSVL DDRGRREARL IESLEKRESF LCQAMLSRQV TQSETAHFTD IVREDSSSPV SDIDNNLCLN EIANDQFSSQ HAAIVFEIGS KREKSLLWSL
0901: IQEFDDWIWA NFNFNLNSVK HRRRSYLDSL TRCKSCHDLY WRDEKHCKIC HATFEVDIDL EERYAIHAAT CMRKEECDTF PDHKVLSSQL QSLKAAVYAI
1001: ESAMPEDALI GAWRKSAHRL WAKRLRRSSS VSEITQVIGD FVGAINEEWL WHCSDQGQTL MGEIINCFPS MPQTTSAIAL WLVKLDTLIA PYVEKAPPER
1101: DQPLCRTRNT SRRASKR
Arabidopsis Description
Homeodomain-like transcriptional regulator [Source:TAIR;Acc:AT4G12750]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.