Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P06610_001 | Banana | nucleus | 59.76 | 75.63 |
| GSMUA_Achr8P27210_001 | Banana | nucleus | 62.88 | 73.91 |
| Zm00001d043915_P002 | Maize | nucleus | 32.26 | 56.96 |
| Os05t0562400-01 | Rice | nucleus | 35.07 | 56.34 |
| KXG33083 | Sorghum | nucleus | 44.56 | 54.85 |
| TraesCS3D01G245800.2 | Wheat | nucleus | 45.32 | 54.82 |
| KXG33081 | Sorghum | nucleus | 44.88 | 54.67 |
| TraesCS3A01G245700.2 | Wheat | nucleus | 45.1 | 54.58 |
| HORVU3Hr1G061660.1 | Barley | nucleus | 44.7 | 54.39 |
| TraesCS3B01G273900.1 | Wheat | nucleus | 44.79 | 54.32 |
| VIT_12s0028g03090.t01 | Wine grape | nucleus | 36.23 | 53.35 |
| Zm00001d011560_P012 | Maize | nucleus | 43.63 | 52.61 |
| Zm00001d039002_P019 | Maize | nucleus, plastid | 42.51 | 52.07 |
| VIT_10s0003g00290.t01 | Wine grape | nucleus | 16.53 | 51.96 |
| TraesCS1D01G403700.1 | Wheat | nucleus | 42.69 | 51.73 |
| TraesCS1A01G395600.1 | Wheat | nucleus | 42.65 | 51.48 |
| HORVU1Hr1G087180.1 | Barley | nucleus | 42.29 | 51.1 |
| TraesCS1B01G424100.1 | Wheat | nucleus | 42.42 | 51.1 |
| Zm00001d009562_P007 | Maize | nucleus, plastid | 40.78 | 48.75 |
| KRH21359 | Soybean | nucleus | 36.19 | 46.27 |
| Solyc07g053610.2.1 | Tomato | nucleus | 36.1 | 45.45 |
| OQU75646 | Sorghum | cytosol | 11.68 | 45.41 |
| VIT_10s0003g00270.t01 | Wine grape | nucleus | 22.64 | 45.32 |
| KRH55891 | Soybean | nucleus | 35.92 | 45.26 |
| KRH50116 | Soybean | nucleus | 35.83 | 45.12 |
| KRH20389 | Soybean | nucleus | 35.92 | 44.88 |
| Zm00001d043914_P001 | Maize | nucleus | 11.23 | 44.76 |
| CDY22305 | Canola | nucleus | 32.31 | 44.23 |
| Bra033725.1-P | Field mustard | nucleus | 32.31 | 44.21 |
| CDY35748 | Canola | nucleus | 30.44 | 44.12 |
| AT5G44180.1 | Thale cress | nucleus | 33.11 | 43.86 |
| CDX94760 | Canola | nucleus | 32.26 | 43.46 |
| Solyc02g077660.2.1 | Tomato | nucleus | 32.49 | 43.44 |
| CDX90154 | Canola | nucleus | 30.44 | 43.42 |
| Bra010869.1-P | Field mustard | nucleus | 30.3 | 43.31 |
| AT1G28420.1 | Thale cress | nucleus | 31.86 | 41.94 |
| Bra032908.1-P | Field mustard | nucleus | 30.84 | 41.64 |
| CDY34099 | Canola | nucleus | 30.88 | 41.62 |
| CDY65661 | Canola | nucleus | 30.88 | 41.45 |
| GSMUA_Achr9P24830_001 | Banana | cytosol, nucleus, plasma membrane | 10.47 | 28.94 |
| GSMUA_Achr6P22010_001 | Banana | nucleus | 11.23 | 24.32 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.7 | ncoils:Coil | InterPro:DDT_dom | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:GSMUA_Achr6G26980_001 | EnsemblPlants:GSMUA_Achr6P26980_001 | EnsemblPlants:GSMUA_Achr6T26980_001 |
| InterPro:HB1/Asxl_HTH | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR018501 | UniProt:M0TAJ3 |
| PFAM:PF00046 | PFAM:PF02791 | PFAM:PF05066 | PFAM:PF15612 | PFAM:PF15613 | PFscan:PS50071 |
| PFscan:PS50827 | SMART:SM00389 | SMART:SM00571 | SUPFAM:SSF46689 | TMHMM:TMhelix | UniParc:UPI000295764C |
| InterPro:WHIM1_dom | InterPro:WHIM2_dom | SEG:seg | : | : | : |
Description
DDT, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G26980_001]
Coordinates
chr6:-:27585835..27607349
Molecular Weight (calculated)
250583.0 Da
IEP (calculated)
6.295
GRAVY (calculated)
-0.536
Length
2244 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLTVINYYQE KPTPESGDKP PKRKMKTPYQ LEILEKAYAV DTHPSETLRA EMSVKTGLSD RQLQMWFCHR RLKDRKLPPT RRQRRDEESL PLTPPPPVLP
0101: PQNDMPSSES GGVGLSSSPY GSSVESRRAV SRAAAVVSRT GADMSAVGRQ YYDPVLPPPP THLNRLTMAE LRILASVEAQ LGEPLRQDGP GLGVEFDPLP
0201: PGAFGAPIGI IIVFCLLILV VVVHANVACG NLIFSSLFAT FSLLGGPCTG SYVWLQLLCP HIKIFLHSPT YLFFNILTEI SAQQKQPVWP YDGTVCGRHD
0301: IKTTKASSFP SGIEHFSPSS SKGKRKPANG GSHTVHLHMG PRPLPEYRFL PEQPSVRSEA YDMASQSHYY DSSIDVPNNR VTSVPSGGKN LHVNDQEAPS
0401: YTFQGQMSGA SLRSQQSRKQ KIPSDLMEYG SAARSDSIPS PASDTQFHTN QVVGLENPHI SSDRTSRDEN ISWLGRKRKS DEARTAKEEE AHQKRIRKEL
0501: EKQDNLRRKR EEQIQREIER HDRERRKEEE RMMREKQREE ERFQREQRRE NERREKFLLK ESRRAEKLRQ KEELRRDKEA ARLKAATERA TARRIAKEYM
0601: ELIEDERLEL MELAAANKGF SSIFALENET LQQLDSFRSM LTAFPPISVG LKKPFAIQPW ADSDEKIANL LMVWKFLITF ADVLGLWPFT LDEFVQSLHD
0701: YDSRLLGEVH VALLKSIIKD IEDVARTPAS TLGASQSSTV NPGGGHPQII EGAYAWGFNI RGWQRHLNYL TWPEILRQFA LAAGFGPQLK KRNVDRVYSR
0801: DENEGNNGKD IISNLRNGLA AENAFALMKE RGYTHRRGSR HRLTPGTVKF AAFHVLSLEG SNGLTILEVA DKIQNSGLRD LTTSKTPEAS IAAALSRDTK
0901: LFERTAPSTY CVRSPYRKDP ADADAVLSAA REKIQVFLSA LSDSEEAEKD TEDVDEAERD EDSEGDAADD PEVDDACIDA KLDKNDPFAS ELKDSMTLTL
1001: SCQEEGGENG VTACTSFGIV EKGPKMPSEK SKTVSTSGVS HLPDGNSNYI EASNLGMEDT EIDESNFGEP WVQGLSEGDY SELSVEERLH ALVALVGVAV
1101: EGNSIRIVLE ERLEAASALK KQMWAEAQLD KRRFKEECPG RLQGTAFSIN KAEAAVSNGA RVGSQMALDN VDKGNDGNLE AISNELFFEP NRVNFGNTSI
1201: GHELTTADVH PVHQHVYATE KSRSQLKAFI GHKAEQLYVY RSLPLGQDRR RNRYWQFSTS SSPNDPGSGR IFFESKDGHW RLIDSEEHLG PRQSLLGLVS
1301: ASSYFGTWHL FLMKETVRLL LLISLQISKY FSLLLLSNKA STLLFCLLEL INNRSQSNVN DEEYFLVLVN KILFRLVGVY NTLLAYALWP LGICNICSSI
1401: IHFFLQSHHL HGHPTHSSHY RSEPCTDRLS VWYVSIYQHM IQWDIPINRY VLSIPVPCQT GIYRSYRVVL LDTANHYYIL GLKPPWLLRS LFPLFQLLRL
1501: SVLFSTLHNG TVTFTSCTWN YNIIYILINN AFDALLAALD TRGIRESHLH SMLQRIESTF KEAIRRNKKF VSSDLVGDPV ITGLTKTSSS PDCSMELDSP
1601: SSSLCGLASD ALENSSSFRI ELGQSKAEIS AAVRRYQGLF RWMWKECYNP YQLCAMKYGK KRCSELLHTC DSCFQSFSAE ERHCPSCHKT FKAFHNSDAI
1701: FSEHMPLCEQ KRKSDPEWKL QVSDSSLSIG IRLLKAQLSM IEVSIPAEAL QAFWTEGYRK SWGVKLQSSS SAEELFQILT LLEGAIKRGV LSTTFETTAE
1801: LLSSANPGVA ADNNTAHSGS VPVLPWVPST SAAVALRLLD LDSSISYMLH PKLESHKGKE GDYITLPSCY VVVHDKQEVE SMGTPDQVDH QNEGRWLHLG
1901: RGGRGRSSRG RRGRGRGRGG RRLIGSGNSS RTELRTENNC SFEKATRKYT RRGRTRGQGH SRGRRTVRPR QRSENRVATI DKRSLLGSFV TASSSSKQCR
2001: IEASPESSDG EQWGIGETEK TYVEDDDSRP CLESGENGQA SGEDYDDQAV VSSDRDECDA DKPQGLVDDE TEDDLGDMEG DEEGEADDDY HNGNDLNTYM
2101: DDEDVEIGDN ADDVGDAEGN GDEDDDVAWS ASSEYTTPGS WRTASTSTTL MPKGNSTHSV PTSGGETLKD MSRTPAQELA AMATEDMVLG GAATDTAMPG
2201: KSTRAAKRTT FLDRPAAIVV ANDSPKHLVS ASVLMFESFS MFLS
0101: PQNDMPSSES GGVGLSSSPY GSSVESRRAV SRAAAVVSRT GADMSAVGRQ YYDPVLPPPP THLNRLTMAE LRILASVEAQ LGEPLRQDGP GLGVEFDPLP
0201: PGAFGAPIGI IIVFCLLILV VVVHANVACG NLIFSSLFAT FSLLGGPCTG SYVWLQLLCP HIKIFLHSPT YLFFNILTEI SAQQKQPVWP YDGTVCGRHD
0301: IKTTKASSFP SGIEHFSPSS SKGKRKPANG GSHTVHLHMG PRPLPEYRFL PEQPSVRSEA YDMASQSHYY DSSIDVPNNR VTSVPSGGKN LHVNDQEAPS
0401: YTFQGQMSGA SLRSQQSRKQ KIPSDLMEYG SAARSDSIPS PASDTQFHTN QVVGLENPHI SSDRTSRDEN ISWLGRKRKS DEARTAKEEE AHQKRIRKEL
0501: EKQDNLRRKR EEQIQREIER HDRERRKEEE RMMREKQREE ERFQREQRRE NERREKFLLK ESRRAEKLRQ KEELRRDKEA ARLKAATERA TARRIAKEYM
0601: ELIEDERLEL MELAAANKGF SSIFALENET LQQLDSFRSM LTAFPPISVG LKKPFAIQPW ADSDEKIANL LMVWKFLITF ADVLGLWPFT LDEFVQSLHD
0701: YDSRLLGEVH VALLKSIIKD IEDVARTPAS TLGASQSSTV NPGGGHPQII EGAYAWGFNI RGWQRHLNYL TWPEILRQFA LAAGFGPQLK KRNVDRVYSR
0801: DENEGNNGKD IISNLRNGLA AENAFALMKE RGYTHRRGSR HRLTPGTVKF AAFHVLSLEG SNGLTILEVA DKIQNSGLRD LTTSKTPEAS IAAALSRDTK
0901: LFERTAPSTY CVRSPYRKDP ADADAVLSAA REKIQVFLSA LSDSEEAEKD TEDVDEAERD EDSEGDAADD PEVDDACIDA KLDKNDPFAS ELKDSMTLTL
1001: SCQEEGGENG VTACTSFGIV EKGPKMPSEK SKTVSTSGVS HLPDGNSNYI EASNLGMEDT EIDESNFGEP WVQGLSEGDY SELSVEERLH ALVALVGVAV
1101: EGNSIRIVLE ERLEAASALK KQMWAEAQLD KRRFKEECPG RLQGTAFSIN KAEAAVSNGA RVGSQMALDN VDKGNDGNLE AISNELFFEP NRVNFGNTSI
1201: GHELTTADVH PVHQHVYATE KSRSQLKAFI GHKAEQLYVY RSLPLGQDRR RNRYWQFSTS SSPNDPGSGR IFFESKDGHW RLIDSEEHLG PRQSLLGLVS
1301: ASSYFGTWHL FLMKETVRLL LLISLQISKY FSLLLLSNKA STLLFCLLEL INNRSQSNVN DEEYFLVLVN KILFRLVGVY NTLLAYALWP LGICNICSSI
1401: IHFFLQSHHL HGHPTHSSHY RSEPCTDRLS VWYVSIYQHM IQWDIPINRY VLSIPVPCQT GIYRSYRVVL LDTANHYYIL GLKPPWLLRS LFPLFQLLRL
1501: SVLFSTLHNG TVTFTSCTWN YNIIYILINN AFDALLAALD TRGIRESHLH SMLQRIESTF KEAIRRNKKF VSSDLVGDPV ITGLTKTSSS PDCSMELDSP
1601: SSSLCGLASD ALENSSSFRI ELGQSKAEIS AAVRRYQGLF RWMWKECYNP YQLCAMKYGK KRCSELLHTC DSCFQSFSAE ERHCPSCHKT FKAFHNSDAI
1701: FSEHMPLCEQ KRKSDPEWKL QVSDSSLSIG IRLLKAQLSM IEVSIPAEAL QAFWTEGYRK SWGVKLQSSS SAEELFQILT LLEGAIKRGV LSTTFETTAE
1801: LLSSANPGVA ADNNTAHSGS VPVLPWVPST SAAVALRLLD LDSSISYMLH PKLESHKGKE GDYITLPSCY VVVHDKQEVE SMGTPDQVDH QNEGRWLHLG
1901: RGGRGRSSRG RRGRGRGRGG RRLIGSGNSS RTELRTENNC SFEKATRKYT RRGRTRGQGH SRGRRTVRPR QRSENRVATI DKRSLLGSFV TASSSSKQCR
2001: IEASPESSDG EQWGIGETEK TYVEDDDSRP CLESGENGQA SGEDYDDQAV VSSDRDECDA DKPQGLVDDE TEDDLGDMEG DEEGEADDDY HNGNDLNTYM
2101: DDEDVEIGDN ADDVGDAEGN GDEDDDVAWS ASSEYTTPGS WRTASTSTTL MPKGNSTHSV PTSGGETLKD MSRTPAQELA AMATEDMVLG GAATDTAMPG
2201: KSTRAAKRTT FLDRPAAIVV ANDSPKHLVS ASVLMFESFS MFLS
0001: MEGGSEKTTP EGCGGESKSK RKMKTAAQLE VLENTYSAEP YPSEAIRADL SVKLNLSDRQ LQMWFCHRRL KERKSTTPSK RQRKELVTPT AMESWEPPVN
0101: AGDLVAGNEL DSRRAARGSG GSGVTVVRRF NEPSSAEVRA IGYVEAQLGE RLRDNGPVLG MEFDPLPPGA FGMPIEMPSH RKATRQAFET NIYVRSDVKP
0201: IKDHVRPIRE YQFIPELPSS RTDHSERVSP SHHFGVPLDG SVMRVSAVSA GHRDDYKISP QIPNLNLATH QGKPGHVYSP NLVEYDSPYQ KSYMDTAAQV
0301: HDDPFVKSER EVGNEDEDDD ALQLERHRKN EEARIAREVE AHEKRIRREL EKQDMLRRKR EEQIRKEMER QDRERRKEEE RLLREKQREE ERYLKEQMRE
0401: LQRREKFLKK ETIRAEKMRQ KEEMRKEKEV ARLKAANERA IARKIAKESM ELIEDERLEL MEVAALTKGL PSMLALDFET LQNLDEYRDK QAIFPPTSVK
0501: LKKPFAVKPW NGSDENVANL LMVWRFLITF ADVLGLWPFT LDEFAQAFHD YDPRLMGEIH IVLLKTIIKD IEGVVRTLST GVGANQNVAA NPGGGHPHVV
0601: EGAYAWGFDI RSWRKNLNVF TWPEILRQLA LSAGLGPQLK KMNIRTVSVH DDNEANNSEN VIFNLRKGVA AENAFAKMQE RGLSNPRRSR HRLTPGTVKF
0701: AAFHVLSLEG EKGLNILEVA EKIQKSGLRD LTTSRTPEAS VAAALSRDTK LFERVAPSTY CVRASYRKDA GDAETIFAEA RERIRAFKSG ITDVEDVDDA
0801: ERDEDSESDV GEDPEVDVNL KKEDPNPLKV ENLIGVEPLL ENGKLDTVPM KTELGLPLTP SLPEEMKDEK RDDTLADQSL EDAVANGEDS ACFDESKLGE
0901: QWVQGLVEGD YSNLSSEERL NALVALIGIA TEGNTIRIAL EERLEVASAL KKQMWGEVQL DKRWKEESLI RANYLSYPTA KPGLNIATPA SGNQESSSAD
1001: VTPISSQDPV SLPQIDVNNV IAGPSLQLQE NVPGVENLQY QQQQGYTADR ERLRAQLKAY VGYKAEELYV YRSLPLGQDR RRNRYWRFSA SASRNDPGCG
1101: RIFVELQDGR WRLIDSEEAS LPPEGLEAFW TENLRKSWGM KLLSSSSHED LYQVLTTLEA ALKRDFLSSN FETTSELLGL QEGALASDLT CGVNVLPWIP
1201: KTAGGVALRL FDFDSSIVYT PDQNNDPLKD KESEDFVGLE TNILRNLHEK DVMETPVQVA AYKQEENWTD PGLGGVSSSG RGGRPPRGRG RPRARGNGKK
1301: PAVSVKPPRG AANSNGETML RPRAQPRGGR KNGRRSGTKG RKRPTQGTLG ICNEVGGGRR VKEVAVTAKT SLPDNDDDWI ETPELQDDDG EASSSGRSFQ
1401: YEDYDDDDVM APIDDFDGGG ESSKLVGRGE FSLHSDDEYE EEEEEEEDMN MKMDVNVVDD EDEDYINEDS YGRKQHGISI SNDAATRKRF NKFEDPDLTS
1501: SSSSDFQ
0101: AGDLVAGNEL DSRRAARGSG GSGVTVVRRF NEPSSAEVRA IGYVEAQLGE RLRDNGPVLG MEFDPLPPGA FGMPIEMPSH RKATRQAFET NIYVRSDVKP
0201: IKDHVRPIRE YQFIPELPSS RTDHSERVSP SHHFGVPLDG SVMRVSAVSA GHRDDYKISP QIPNLNLATH QGKPGHVYSP NLVEYDSPYQ KSYMDTAAQV
0301: HDDPFVKSER EVGNEDEDDD ALQLERHRKN EEARIAREVE AHEKRIRREL EKQDMLRRKR EEQIRKEMER QDRERRKEEE RLLREKQREE ERYLKEQMRE
0401: LQRREKFLKK ETIRAEKMRQ KEEMRKEKEV ARLKAANERA IARKIAKESM ELIEDERLEL MEVAALTKGL PSMLALDFET LQNLDEYRDK QAIFPPTSVK
0501: LKKPFAVKPW NGSDENVANL LMVWRFLITF ADVLGLWPFT LDEFAQAFHD YDPRLMGEIH IVLLKTIIKD IEGVVRTLST GVGANQNVAA NPGGGHPHVV
0601: EGAYAWGFDI RSWRKNLNVF TWPEILRQLA LSAGLGPQLK KMNIRTVSVH DDNEANNSEN VIFNLRKGVA AENAFAKMQE RGLSNPRRSR HRLTPGTVKF
0701: AAFHVLSLEG EKGLNILEVA EKIQKSGLRD LTTSRTPEAS VAAALSRDTK LFERVAPSTY CVRASYRKDA GDAETIFAEA RERIRAFKSG ITDVEDVDDA
0801: ERDEDSESDV GEDPEVDVNL KKEDPNPLKV ENLIGVEPLL ENGKLDTVPM KTELGLPLTP SLPEEMKDEK RDDTLADQSL EDAVANGEDS ACFDESKLGE
0901: QWVQGLVEGD YSNLSSEERL NALVALIGIA TEGNTIRIAL EERLEVASAL KKQMWGEVQL DKRWKEESLI RANYLSYPTA KPGLNIATPA SGNQESSSAD
1001: VTPISSQDPV SLPQIDVNNV IAGPSLQLQE NVPGVENLQY QQQQGYTADR ERLRAQLKAY VGYKAEELYV YRSLPLGQDR RRNRYWRFSA SASRNDPGCG
1101: RIFVELQDGR WRLIDSEEAS LPPEGLEAFW TENLRKSWGM KLLSSSSHED LYQVLTTLEA ALKRDFLSSN FETTSELLGL QEGALASDLT CGVNVLPWIP
1201: KTAGGVALRL FDFDSSIVYT PDQNNDPLKD KESEDFVGLE TNILRNLHEK DVMETPVQVA AYKQEENWTD PGLGGVSSSG RGGRPPRGRG RPRARGNGKK
1301: PAVSVKPPRG AANSNGETML RPRAQPRGGR KNGRRSGTKG RKRPTQGTLG ICNEVGGGRR VKEVAVTAKT SLPDNDDDWI ETPELQDDDG EASSSGRSFQ
1401: YEDYDDDDVM APIDDFDGGG ESSKLVGRGE FSLHSDDEYE EEEEEEEDMN MKMDVNVVDD EDEDYINEDS YGRKQHGISI SNDAATRKRF NKFEDPDLTS
1501: SSSSDFQ
Arabidopsis Description
RLT2Homeobox-DDT domain protein RLT2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFH1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.