Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G403700.1 | Wheat | nucleus | 96.88 | 97.25 |
| TraesCS1B01G424100.1 | Wheat | nucleus | 95.27 | 95.06 |
| HORVU1Hr1G087180.1 | Barley | nucleus | 91.45 | 91.55 |
| Os05t0562400-01 | Rice | nucleus | 56.21 | 74.8 |
| Zm00001d039002_P019 | Maize | nucleus, plastid | 65.14 | 66.1 |
| TraesCS3A01G245700.2 | Wheat | nucleus | 63.64 | 63.81 |
| Zm00001d009562_P007 | Maize | nucleus, plastid | 61.22 | 60.63 |
| GSMUA_Achr9P06610_001 | Banana | nucleus | 50.46 | 52.9 |
| GSMUA_Achr8P27210_001 | Banana | nucleus | 52.99 | 51.6 |
| VIT_12s0028g03090.t01 | Wine grape | nucleus | 39.97 | 48.75 |
| VIT_10s0003g00290.t01 | Wine grape | nucleus | 18.56 | 48.32 |
| KRH21359 | Soybean | nucleus | 40.67 | 43.08 |
| Solyc07g053610.2.1 | Tomato | nucleus | 41.15 | 42.93 |
| GSMUA_Achr6P26980_001 | Banana | nucleus | 51.48 | 42.65 |
| AT5G44180.1 | Thale cress | nucleus | 38.73 | 42.5 |
| CDY35748 | Canola | nucleus | 35.29 | 42.38 |
| KRH20389 | Soybean | nucleus | 40.83 | 42.26 |
| CDY22305 | Canola | nucleus | 37.22 | 42.22 |
| Bra033725.1-P | Field mustard | nucleus | 37.22 | 42.2 |
| KRH50116 | Soybean | nucleus | 40.02 | 41.75 |
| CDX94760 | Canola | nucleus | 37.33 | 41.66 |
| Bra010869.1-P | Field mustard | nucleus | 35.18 | 41.66 |
| KRH55891 | Soybean | nucleus | 39.81 | 41.55 |
| CDX90154 | Canola | nucleus | 35.13 | 41.51 |
| Solyc02g077660.2.1 | Tomato | nucleus | 37.12 | 41.12 |
| AT1G28420.1 | Thale cress | nucleus | 37.49 | 40.88 |
| VIT_10s0003g00270.t01 | Wine grape | nucleus | 24.64 | 40.86 |
| Bra032908.1-P | Field mustard | nucleus | 36.15 | 40.43 |
| CDY34099 | Canola | nucleus | 36.15 | 40.36 |
| CDY65661 | Canola | nucleus | 36.09 | 40.13 |
| TraesCS2A01G124800.1 | Wheat | nucleus | 13.88 | 23.67 |
| TraesCS3A01G112300.2 | Wheat | nucleus | 13.77 | 23.55 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.7 | ncoils:Coil | InterPro:DDT_dom | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:HB1/Asxl_HTH | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom |
| InterPro:IPR001356 | InterPro:IPR018501 | PFAM:PF00046 | PFAM:PF02791 | PFAM:PF05066 | PFAM:PF15612 |
| PFAM:PF15613 | PFscan:PS50071 | PFscan:PS50827 | PANTHER:PTHR36968 | SMART:SM00389 | SMART:SM00571 |
| SUPFAM:SSF46689 | EnsemblPlantsGene:TraesCS1A01G395600 | EnsemblPlants:TraesCS1A01G395600.1 | InterPro:WHIM1_dom | InterPro:WHIM2_dom | TIGR:cd00086 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr1A:-:561335642..561346990
Molecular Weight (calculated)
205434.0 Da
IEP (calculated)
5.360
GRAVY (calculated)
-0.777
Length
1859 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDSSGDGGDE GAGAAPGSPA SAPSAGAGPG GASGSSGKPT ARRVMKTPYQ LEVLEQTYTD DPYPNEAKRV ELSAKLGLTD RQLQMWFCHR RLKDRRPPPA
0101: TKRRDEEVAV PVLAPPPVLH HSLPHPHAEP TYGEQLLLPC GRSRRGPGRS SAVPRISAPE VDRRYYEAAH QVMLPPQAPV QLTRAAHRAI ETVQQLIGEP
0201: LREDGPVLGD HFDPLPPGAF GAPMPVVPEQ RKQPYRSHET SVFSAHDPKP MKASAFLPSI DPSVSSTVTG KRKYMSGNSS HLPSRAVHEY QFLPEHTSDI
0301: YERTSQSCFY DASAEASNSR ISSLSTGSRL LHGAEKASSY AFDGQVSGSS HLIQHGKPLI SLSGSADYEM ASNIDVSPAP IEGQFGIPQV AGLQNPLASA
0401: EGVDYHDEDA YRLDRKRKHN EESKIAKEVD AEEKRIRKEL EKQDVLKKKR EEQMRKEVER YDRERKKEEE RFMREKQREE ERLQKEQWRE QKRMEKFLVK
0501: QSLRAEKLKQ KEELRKEKEA ARQKAANERA TARRIAREYM ELMEDERLEL MELVSRSKGL PSMLSLDSDT LQQLDSFRGM LTQFPTEAVR LKVPFSIKPW
0601: TSSESNIGNL LMVWKFFFTF ADVLELPSFT LDEFVQSLHD YDSRLLGELH VAVLKSIIKD IEDVARTSSV VSGVNQSSSA NPGGGHPQIV EGAYAWGFNI
0701: LTWQRHLTYL TWPEILRQFG LSAGFGPQLK KRTEDVYHDD NEGRNSADVI STLRNGSAAV KSAALMKERG YTNRRRSRHR LTPGTVKFAA FHVLSLEGDE
0801: GLSILEVAEK IQRSGLRDLT TSKTPEASIS AALSRDTKLF ERTAPLTYCV KTPYRKDPAD SEAVFSEARE KIRVFQNAFS GCEEVEKDVE DAERGDDDSE
0901: CDEADDDPDG DEVNIEEKDV NASVARAKDA GLPIAAGDTN DEVKGVINPS MPSSPHSKSP SGLQRMVDKS TAVSTSSDPP IGASQDAEID ESNQGESWVQ
1001: GLAEGDYCDL SVEERLNALV ALIGVATEGN SMRAILEERL EAANALKKQM WAESQLDRRR SREEFAGRMQ HDPCTDLKAD ADQGNNVGEC TLTQVHNLIK
1101: ENGGKASSVN NDFLVDQQSQ LNAGNMVHEG NGVSRISNAN PESLSAQQYA SSEKTRSQLK SFIGHKAEQL YVYRSLPLGQ DRRRNRYWQF STSVSSNDPG
1201: SGRIFFESRD GYWRLIDSAE AFDALVASLD TRGIRESHLH SMLQSIESTF KDAIGRIKCA TIEHSAGRNL RNGSSEIISP NHSNEFGSPC STLSGVVSDT
1301: VVAYSDSFKI ELGRNDLEKV AISERACMFL KWMWEGNHQS TCAMKYGKKR CSDLIHGCDY CYQIYLAEET HCSSCHKTFK SIHSLSEHTS QCEEKRRTDP
1401: NWKIQISDDS VPIRPRLLKL LLATIEASVP AEALQPFWTD GYRKSWGVKL FSTSSNEEIF QLLTVLEGAL KRDYLSSNFE TTAELLNSNT LDFAGRNSIA
1501: CSGSAAVLPW VPSTAAAVTL RLLDLDSSLS YTLDQKAGLN KEREAGDFIK GPSRYTAVKN KQEMGPVGAP GFDHHVGAQL TPSNGLRGRG RGGRGRGRGG
1601: RSLSRGGRVP RGVGSSPRIE FRDDNNVSYK ETTDKQAGRG RGRGRGRGRG RGRGRGRGSI TESGSGSGSV RGRGRGRGRG LRTVRPRQPV ELGARSIPKA
1701: NLLGTFGMLS NAKPMTLHSP QSSGAEEWGL DRRAYAEDDE DNSVSQSDES ERDEENGEPM NEDYDEQLPD YSRDNSASSP RQMMDSESED NDEYDEEGEE
1801: DGADYDAEQP MDEDNDDAEM SGDDELGDDG DDDDGGGSQG GAGNADDDDA TSYSSEYSE
0101: TKRRDEEVAV PVLAPPPVLH HSLPHPHAEP TYGEQLLLPC GRSRRGPGRS SAVPRISAPE VDRRYYEAAH QVMLPPQAPV QLTRAAHRAI ETVQQLIGEP
0201: LREDGPVLGD HFDPLPPGAF GAPMPVVPEQ RKQPYRSHET SVFSAHDPKP MKASAFLPSI DPSVSSTVTG KRKYMSGNSS HLPSRAVHEY QFLPEHTSDI
0301: YERTSQSCFY DASAEASNSR ISSLSTGSRL LHGAEKASSY AFDGQVSGSS HLIQHGKPLI SLSGSADYEM ASNIDVSPAP IEGQFGIPQV AGLQNPLASA
0401: EGVDYHDEDA YRLDRKRKHN EESKIAKEVD AEEKRIRKEL EKQDVLKKKR EEQMRKEVER YDRERKKEEE RFMREKQREE ERLQKEQWRE QKRMEKFLVK
0501: QSLRAEKLKQ KEELRKEKEA ARQKAANERA TARRIAREYM ELMEDERLEL MELVSRSKGL PSMLSLDSDT LQQLDSFRGM LTQFPTEAVR LKVPFSIKPW
0601: TSSESNIGNL LMVWKFFFTF ADVLELPSFT LDEFVQSLHD YDSRLLGELH VAVLKSIIKD IEDVARTSSV VSGVNQSSSA NPGGGHPQIV EGAYAWGFNI
0701: LTWQRHLTYL TWPEILRQFG LSAGFGPQLK KRTEDVYHDD NEGRNSADVI STLRNGSAAV KSAALMKERG YTNRRRSRHR LTPGTVKFAA FHVLSLEGDE
0801: GLSILEVAEK IQRSGLRDLT TSKTPEASIS AALSRDTKLF ERTAPLTYCV KTPYRKDPAD SEAVFSEARE KIRVFQNAFS GCEEVEKDVE DAERGDDDSE
0901: CDEADDDPDG DEVNIEEKDV NASVARAKDA GLPIAAGDTN DEVKGVINPS MPSSPHSKSP SGLQRMVDKS TAVSTSSDPP IGASQDAEID ESNQGESWVQ
1001: GLAEGDYCDL SVEERLNALV ALIGVATEGN SMRAILEERL EAANALKKQM WAESQLDRRR SREEFAGRMQ HDPCTDLKAD ADQGNNVGEC TLTQVHNLIK
1101: ENGGKASSVN NDFLVDQQSQ LNAGNMVHEG NGVSRISNAN PESLSAQQYA SSEKTRSQLK SFIGHKAEQL YVYRSLPLGQ DRRRNRYWQF STSVSSNDPG
1201: SGRIFFESRD GYWRLIDSAE AFDALVASLD TRGIRESHLH SMLQSIESTF KDAIGRIKCA TIEHSAGRNL RNGSSEIISP NHSNEFGSPC STLSGVVSDT
1301: VVAYSDSFKI ELGRNDLEKV AISERACMFL KWMWEGNHQS TCAMKYGKKR CSDLIHGCDY CYQIYLAEET HCSSCHKTFK SIHSLSEHTS QCEEKRRTDP
1401: NWKIQISDDS VPIRPRLLKL LLATIEASVP AEALQPFWTD GYRKSWGVKL FSTSSNEEIF QLLTVLEGAL KRDYLSSNFE TTAELLNSNT LDFAGRNSIA
1501: CSGSAAVLPW VPSTAAAVTL RLLDLDSSLS YTLDQKAGLN KEREAGDFIK GPSRYTAVKN KQEMGPVGAP GFDHHVGAQL TPSNGLRGRG RGGRGRGRGG
1601: RSLSRGGRVP RGVGSSPRIE FRDDNNVSYK ETTDKQAGRG RGRGRGRGRG RGRGRGRGSI TESGSGSGSV RGRGRGRGRG LRTVRPRQPV ELGARSIPKA
1701: NLLGTFGMLS NAKPMTLHSP QSSGAEEWGL DRRAYAEDDE DNSVSQSDES ERDEENGEPM NEDYDEQLPD YSRDNSASSP RQMMDSESED NDEYDEEGEE
1801: DGADYDAEQP MDEDNDDAEM SGDDELGDDG DDDDGGGSQG GAGNADDDDA TSYSSEYSE
0001: MEGGSEKTTP EGCGGESKSK RKMKTAAQLE VLENTYSAEP YPSEAIRADL SVKLNLSDRQ LQMWFCHRRL KERKSTTPSK RQRKELVTPT AMESWEPPVN
0101: AGDLVAGNEL DSRRAARGSG GSGVTVVRRF NEPSSAEVRA IGYVEAQLGE RLRDNGPVLG MEFDPLPPGA FGMPIEMPSH RKATRQAFET NIYVRSDVKP
0201: IKDHVRPIRE YQFIPELPSS RTDHSERVSP SHHFGVPLDG SVMRVSAVSA GHRDDYKISP QIPNLNLATH QGKPGHVYSP NLVEYDSPYQ KSYMDTAAQV
0301: HDDPFVKSER EVGNEDEDDD ALQLERHRKN EEARIAREVE AHEKRIRREL EKQDMLRRKR EEQIRKEMER QDRERRKEEE RLLREKQREE ERYLKEQMRE
0401: LQRREKFLKK ETIRAEKMRQ KEEMRKEKEV ARLKAANERA IARKIAKESM ELIEDERLEL MEVAALTKGL PSMLALDFET LQNLDEYRDK QAIFPPTSVK
0501: LKKPFAVKPW NGSDENVANL LMVWRFLITF ADVLGLWPFT LDEFAQAFHD YDPRLMGEIH IVLLKTIIKD IEGVVRTLST GVGANQNVAA NPGGGHPHVV
0601: EGAYAWGFDI RSWRKNLNVF TWPEILRQLA LSAGLGPQLK KMNIRTVSVH DDNEANNSEN VIFNLRKGVA AENAFAKMQE RGLSNPRRSR HRLTPGTVKF
0701: AAFHVLSLEG EKGLNILEVA EKIQKSGLRD LTTSRTPEAS VAAALSRDTK LFERVAPSTY CVRASYRKDA GDAETIFAEA RERIRAFKSG ITDVEDVDDA
0801: ERDEDSESDV GEDPEVDVNL KKEDPNPLKV ENLIGVEPLL ENGKLDTVPM KTELGLPLTP SLPEEMKDEK RDDTLADQSL EDAVANGEDS ACFDESKLGE
0901: QWVQGLVEGD YSNLSSEERL NALVALIGIA TEGNTIRIAL EERLEVASAL KKQMWGEVQL DKRWKEESLI RANYLSYPTA KPGLNIATPA SGNQESSSAD
1001: VTPISSQDPV SLPQIDVNNV IAGPSLQLQE NVPGVENLQY QQQQGYTADR ERLRAQLKAY VGYKAEELYV YRSLPLGQDR RRNRYWRFSA SASRNDPGCG
1101: RIFVELQDGR WRLIDSEEAF DYLVKSLDVR GVRESHLHFM LLKIEASFKE ALRRNVAANP GVCSISSSLD SDTAEISTTF KIELGDSNAV ERCSVLQRFH
1201: SFEKWMWDNM LHPSALSAFK YGAKQSSPLF RICRICAELH FVGDICCPSC GQMHAGPDVG ELCFAEQVAQ LGDNLRRGDT GFILRSSILS PLRIRLLKVQ
1301: LALVEASLPP EGLEAFWTEN LRKSWGMKLL SSSSHEDLYQ VLTTLEAALK RDFLSSNFET TSELLGLQEG ALASDLTCGV NVLPWIPKTA GGVALRLFDF
1401: DSSIVYTPDQ NNDPLKDKES EDFVGLETNI LRNLHEKDVM ETPVQVAAYK QEENWTDPGL GGVSSSGRGG RPPRGRGRPR ARGNGKKPAV SVKPPRGAAN
1501: SNGETMLRPR AQPRGGRKNG RRSGTKGRKR PTQGTLGICN EVGGGRRVKE VAVTAKTSLP DNDDDWIETP ELQDDDGEAS SSGRSFQYED YDDDDVMAPI
1601: DDFDGGGESS KLVGRGEFSL HSDDEYEEEE EEEEDMNMKM DVNVVDDEDE DYINEDSYGR KQHGISISND AATRKRFNKF EDPDLTSSSS SDFQ
0101: AGDLVAGNEL DSRRAARGSG GSGVTVVRRF NEPSSAEVRA IGYVEAQLGE RLRDNGPVLG MEFDPLPPGA FGMPIEMPSH RKATRQAFET NIYVRSDVKP
0201: IKDHVRPIRE YQFIPELPSS RTDHSERVSP SHHFGVPLDG SVMRVSAVSA GHRDDYKISP QIPNLNLATH QGKPGHVYSP NLVEYDSPYQ KSYMDTAAQV
0301: HDDPFVKSER EVGNEDEDDD ALQLERHRKN EEARIAREVE AHEKRIRREL EKQDMLRRKR EEQIRKEMER QDRERRKEEE RLLREKQREE ERYLKEQMRE
0401: LQRREKFLKK ETIRAEKMRQ KEEMRKEKEV ARLKAANERA IARKIAKESM ELIEDERLEL MEVAALTKGL PSMLALDFET LQNLDEYRDK QAIFPPTSVK
0501: LKKPFAVKPW NGSDENVANL LMVWRFLITF ADVLGLWPFT LDEFAQAFHD YDPRLMGEIH IVLLKTIIKD IEGVVRTLST GVGANQNVAA NPGGGHPHVV
0601: EGAYAWGFDI RSWRKNLNVF TWPEILRQLA LSAGLGPQLK KMNIRTVSVH DDNEANNSEN VIFNLRKGVA AENAFAKMQE RGLSNPRRSR HRLTPGTVKF
0701: AAFHVLSLEG EKGLNILEVA EKIQKSGLRD LTTSRTPEAS VAAALSRDTK LFERVAPSTY CVRASYRKDA GDAETIFAEA RERIRAFKSG ITDVEDVDDA
0801: ERDEDSESDV GEDPEVDVNL KKEDPNPLKV ENLIGVEPLL ENGKLDTVPM KTELGLPLTP SLPEEMKDEK RDDTLADQSL EDAVANGEDS ACFDESKLGE
0901: QWVQGLVEGD YSNLSSEERL NALVALIGIA TEGNTIRIAL EERLEVASAL KKQMWGEVQL DKRWKEESLI RANYLSYPTA KPGLNIATPA SGNQESSSAD
1001: VTPISSQDPV SLPQIDVNNV IAGPSLQLQE NVPGVENLQY QQQQGYTADR ERLRAQLKAY VGYKAEELYV YRSLPLGQDR RRNRYWRFSA SASRNDPGCG
1101: RIFVELQDGR WRLIDSEEAF DYLVKSLDVR GVRESHLHFM LLKIEASFKE ALRRNVAANP GVCSISSSLD SDTAEISTTF KIELGDSNAV ERCSVLQRFH
1201: SFEKWMWDNM LHPSALSAFK YGAKQSSPLF RICRICAELH FVGDICCPSC GQMHAGPDVG ELCFAEQVAQ LGDNLRRGDT GFILRSSILS PLRIRLLKVQ
1301: LALVEASLPP EGLEAFWTEN LRKSWGMKLL SSSSHEDLYQ VLTTLEAALK RDFLSSNFET TSELLGLQEG ALASDLTCGV NVLPWIPKTA GGVALRLFDF
1401: DSSIVYTPDQ NNDPLKDKES EDFVGLETNI LRNLHEKDVM ETPVQVAAYK QEENWTDPGL GGVSSSGRGG RPPRGRGRPR ARGNGKKPAV SVKPPRGAAN
1501: SNGETMLRPR AQPRGGRKNG RRSGTKGRKR PTQGTLGICN EVGGGRRVKE VAVTAKTSLP DNDDDWIETP ELQDDDGEAS SSGRSFQYED YDDDDVMAPI
1601: DDFDGGGESS KLVGRGEFSL HSDDEYEEEE EEEEDMNMKM DVNVVDDEDE DYINEDSYGR KQHGISISND AATRKRFNKF EDPDLTSSSS SDFQ
Arabidopsis Description
RLT2Homeobox-DDT domain protein RLT2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFH1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.