Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH50116 | Soybean | nucleus | 92.48 | 93.21 |
| KRH21359 | Soybean | nucleus | 72.94 | 74.64 |
| CDY35748 | Canola | nucleus | 42.04 | 48.77 |
| Solyc02g077660.2.1 | Tomato | nucleus | 45.27 | 48.45 |
| Bra010869.1-P | Field mustard | nucleus | 42.32 | 48.41 |
| CDX90154 | Canola | nucleus | 42.37 | 48.38 |
| VIT_10s0003g00270.t01 | Wine grape | nucleus | 29.79 | 47.73 |
| Bra032908.1-P | Field mustard | nucleus | 43.93 | 47.47 |
| CDY34099 | Canola | nucleus | 43.93 | 47.39 |
| CDY65661 | Canola | nucleus | 43.65 | 46.89 |
| AT1G28420.1 | Thale cress | nucleus | 44.43 | 46.8 |
| Zm00001d043915_P002 | Maize | nucleus | 32.85 | 46.42 |
| Os05t0562400-01 | Rice | nucleus | 35.13 | 45.17 |
| KRH55891 | Soybean | nucleus | 44.32 | 44.69 |
| GSMUA_Achr9P06610_001 | Banana | nucleus | 42.76 | 43.32 |
| GSMUA_Achr8P27210_001 | Banana | nucleus | 45.32 | 42.64 |
| KXG33081 | Sorghum | nucleus | 43.21 | 42.13 |
| KXG33083 | Sorghum | nucleus | 42.71 | 42.07 |
| HORVU3Hr1G061660.1 | Barley | nucleus | 42.93 | 41.81 |
| TraesCS3A01G245700.2 | Wheat | nucleus | 42.76 | 41.42 |
| TraesCS3D01G245800.2 | Wheat | nucleus | 42.71 | 41.35 |
| TraesCS3B01G273900.1 | Wheat | nucleus | 42.54 | 41.3 |
| TraesCS1B01G424100.1 | Wheat | nucleus | 42.65 | 41.12 |
| TraesCS1D01G403700.1 | Wheat | nucleus | 42.37 | 41.09 |
| Zm00001d039002_P019 | Maize | nucleus, plastid | 41.7 | 40.88 |
| HORVU1Hr1G087180.1 | Barley | nucleus | 42.26 | 40.87 |
| TraesCS1A01G395600.1 | Wheat | nucleus | 42.26 | 40.83 |
| Zm00001d011560_P012 | Maize | nucleus | 42.2 | 40.73 |
| Zm00001d009562_P007 | Maize | nucleus, plastid | 42.2 | 40.38 |
| GSMUA_Achr6P26980_001 | Banana | nucleus | 44.88 | 35.92 |
| Zm00001d043914_P001 | Maize | nucleus | 9.58 | 30.55 |
| OQU75646 | Sorghum | cytosol | 9.41 | 29.29 |
| KRH60120 | Soybean | nucleus | 15.42 | 25.6 |
| KRH41406 | Soybean | nucleus | 15.26 | 25.35 |
| KRH62715 | Soybean | nucleus | 3.29 | 21.93 |
| KRG99068 | Soybean | nucleus | 5.68 | 19.35 |
| KRH45931 | Soybean | nucleus | 5.68 | 19.03 |
| KRH73554 | Soybean | nucleus | 5.57 | 19.01 |
| KRH14573 | Soybean | nucleus | 5.51 | 18.79 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100784945 | MapMan:15.5.3.7 | EMBL:ACUP02008262 | ncoils:Coil | InterPro:DDT_dom |
| EnsemblPlantsGene:GLYMA_13G175200 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:HB1/Asxl_HTH | InterPro:Homeobox-like_sf |
| InterPro:Homeobox_dom | UniProt:I1M069 | InterPro:IPR001356 | InterPro:IPR018501 | EnsemblPlants:KRH20389 | ProteinID:KRH20389 |
| ProteinID:KRH20389.1 | PFAM:PF00046 | PFAM:PF02791 | PFAM:PF05066 | PFAM:PF15612 | PFAM:PF15613 |
| PFscan:PS50071 | PFscan:PS50827 | PANTHER:PTHR36968 | PANTHER:PTHR36968:SF6 | SMART:SM00389 | SMART:SM00571 |
| SUPFAM:SSF46689 | UniParc:UPI0002954903 | InterPro:WHIM1_dom | InterPro:WHIM2_dom | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr13:+:28979340..28989140
Molecular Weight (calculated)
201172.0 Da
IEP (calculated)
5.223
GRAVY (calculated)
-0.820
Length
1796 amino acids
Sequence
(BLAST)
(BLAST)
0001: MESEACSEGE NNLKRGGTDD DSNENNNNNN NNGSSGKIVN CNEGQSKPKR QMKTPFQLET LEKAYAVDNY PSETMRVELS EKLGLSDRQL QMWFCHRRLK
0101: DKKDLPSKKP PRKVLAEPLP DSPRDDPRLG LELANEYGSG SGSGSSPYAR VEPLNVAPLG VPGYYESPQA KLEHRAIACV EAQLGEPLRE NGPILGVEFD
0201: PLPPDAFGAP IAVTEQQKLP SFAYDSKIYE RHDARTNKAM ARTFRDNQFL PNKSAIRSDA SGQFSQSHLH DLVEGSVRNP PFAHGNEHLP RIHATKGHSS
0301: RVRLLSQQDK QLIPYQSPSR DDDVAPQREM YPNIANVGKN SHFTDHQIVG PENLHALHSG QVLHNNATRI EKKRKSDDAQ DVEAHEMKIR KELEKQDNLR
0401: RKSEERTRKE MERQDRERKK EEERLMRERQ REEERARREQ KREIERREKF LLKENLKAEK MRQREELRKE RDAERRKAAL EKATARRMAK ESMELIEDEQ
0501: LEMMELAASS KGFSSIVHLD FDTLQHLESF RDSLSVFPPK SVKLRKPFAI KPWINSENNV GNLLMVWRFF INFADVLELW SFTLDEFVQA FHDYDSRLLG
0601: EIHVALLKVI IKDIEDVART PSTGLGANQN GAANSGGGHP EIVEGAYAWG FDIRNWHKHL NLLTWPEIFR QLALSAGYGP QLKKRSISWS YANNKDEGRN
0701: CEDIISTLRN GSAAENAVAK MHERGLLAPR RSRHRLTPGT VKFAAFHVLS LEGEKGLNVL ELAEKIQKSG LRDLTTSKTP EASISVALTR DAKLFERIAP
0801: STYCVREAFR KDPADAESIL SDARKKIQIF EKGFLAGEDT DDIEREESES DEIDEDPEVD DLVNLSSANR TSEQCDDFSS NGKANLGHNV ELQGEFDKDL
0901: PCFPESGSKN ADAPIAVTGQ PGAVEDLNVG NLGEDNMEID ESKPGESWVL GLAEGEYSDL SVEERLNALV VLVGVANEGN SIRVVLEDRL EAANALKKQM
1001: WAESQVDKVR LKDDTFSKSD FPSINGNKVE IQYSCPVMEG KQSPLIGINI GNNNNNNNNN VPSPSIAENQ KAVFGAQSQS IEKHSSAQDL CTGPDNPQTQ
1101: SLGQYSKRSR SQWKSYISHM AEEMYVYRSL PLGQDRRRNR YWQFVASASS NDPGSGRIFV EYLDGYWRLI DTEEAFDALL NSLDSRGIRE SHLRLMLQKV
1201: ESSFKENVRK NTQCSKIGSI GETCVKNEAD ETDSSPDRHT GSDSPSSTLC GLNSDTSETS SSFKIELGKS ESDKKSALRR YQDFQKWMWK ECYNSSILCA
1301: MKYGKKRCKP QVVMCDICLN PYFFEDSHCS GCHRTFPSNS GFSFSKHAFQ CGDKSSKDIC ILDSLPLRTR LLKAMLAFIE ASVLPEALKS NWTEDIRRHW
1401: SVKLSKSSSI EELLQILTLL ERALKQDFLS STFSTTGEQL GLNSMSKSAA QTSTDPESVA VLPWVPLTTS AVSLRLLEFD ASIVYVPHEK PEPCEEKEDR
1501: VYIKLPSRYN PSKSSKVAEA ADLDRDEFMK VKSAPVKIVQ SNNKRGRGSR DKGRGKKLSK TKQNTGRRGA KVAGNAGQRI KKQGVGSQGQ AGGRGRRTVR
1601: KRRVGKKAVE DLLMGHRDAS HSSSIGRESL RSLDDDWDDE KASPMTPIHM GAANSNNSIE EVESDDNVEA MESDDNVQAM ESDDKVQAME SDDNVQAAES
1701: DDNGQAVEYD QGNWEIGFNG APSRWSRDLV GGISDEDEDE DAEASEDDND NGIGIENNEE VDSEADAMSE EGSDGTANRI VNEESSDSDV SEDSSD
0101: DKKDLPSKKP PRKVLAEPLP DSPRDDPRLG LELANEYGSG SGSGSSPYAR VEPLNVAPLG VPGYYESPQA KLEHRAIACV EAQLGEPLRE NGPILGVEFD
0201: PLPPDAFGAP IAVTEQQKLP SFAYDSKIYE RHDARTNKAM ARTFRDNQFL PNKSAIRSDA SGQFSQSHLH DLVEGSVRNP PFAHGNEHLP RIHATKGHSS
0301: RVRLLSQQDK QLIPYQSPSR DDDVAPQREM YPNIANVGKN SHFTDHQIVG PENLHALHSG QVLHNNATRI EKKRKSDDAQ DVEAHEMKIR KELEKQDNLR
0401: RKSEERTRKE MERQDRERKK EEERLMRERQ REEERARREQ KREIERREKF LLKENLKAEK MRQREELRKE RDAERRKAAL EKATARRMAK ESMELIEDEQ
0501: LEMMELAASS KGFSSIVHLD FDTLQHLESF RDSLSVFPPK SVKLRKPFAI KPWINSENNV GNLLMVWRFF INFADVLELW SFTLDEFVQA FHDYDSRLLG
0601: EIHVALLKVI IKDIEDVART PSTGLGANQN GAANSGGGHP EIVEGAYAWG FDIRNWHKHL NLLTWPEIFR QLALSAGYGP QLKKRSISWS YANNKDEGRN
0701: CEDIISTLRN GSAAENAVAK MHERGLLAPR RSRHRLTPGT VKFAAFHVLS LEGEKGLNVL ELAEKIQKSG LRDLTTSKTP EASISVALTR DAKLFERIAP
0801: STYCVREAFR KDPADAESIL SDARKKIQIF EKGFLAGEDT DDIEREESES DEIDEDPEVD DLVNLSSANR TSEQCDDFSS NGKANLGHNV ELQGEFDKDL
0901: PCFPESGSKN ADAPIAVTGQ PGAVEDLNVG NLGEDNMEID ESKPGESWVL GLAEGEYSDL SVEERLNALV VLVGVANEGN SIRVVLEDRL EAANALKKQM
1001: WAESQVDKVR LKDDTFSKSD FPSINGNKVE IQYSCPVMEG KQSPLIGINI GNNNNNNNNN VPSPSIAENQ KAVFGAQSQS IEKHSSAQDL CTGPDNPQTQ
1101: SLGQYSKRSR SQWKSYISHM AEEMYVYRSL PLGQDRRRNR YWQFVASASS NDPGSGRIFV EYLDGYWRLI DTEEAFDALL NSLDSRGIRE SHLRLMLQKV
1201: ESSFKENVRK NTQCSKIGSI GETCVKNEAD ETDSSPDRHT GSDSPSSTLC GLNSDTSETS SSFKIELGKS ESDKKSALRR YQDFQKWMWK ECYNSSILCA
1301: MKYGKKRCKP QVVMCDICLN PYFFEDSHCS GCHRTFPSNS GFSFSKHAFQ CGDKSSKDIC ILDSLPLRTR LLKAMLAFIE ASVLPEALKS NWTEDIRRHW
1401: SVKLSKSSSI EELLQILTLL ERALKQDFLS STFSTTGEQL GLNSMSKSAA QTSTDPESVA VLPWVPLTTS AVSLRLLEFD ASIVYVPHEK PEPCEEKEDR
1501: VYIKLPSRYN PSKSSKVAEA ADLDRDEFMK VKSAPVKIVQ SNNKRGRGSR DKGRGKKLSK TKQNTGRRGA KVAGNAGQRI KKQGVGSQGQ AGGRGRRTVR
1601: KRRVGKKAVE DLLMGHRDAS HSSSIGRESL RSLDDDWDDE KASPMTPIHM GAANSNNSIE EVESDDNVEA MESDDNVQAM ESDDKVQAME SDDNVQAAES
1701: DDNGQAVEYD QGNWEIGFNG APSRWSRDLV GGISDEDEDE DAEASEDDND NGIGIENNEE VDSEADAMSE EGSDGTANRI VNEESSDSDV SEDSSD
0001: MEMGSDGEDQ KIRSVVGDAN LNNKKKKIDN NSSSKDGRVK PKRQMKTPFQ LETLEKVYSE EKYPSEATRA ELSEKLDLSD RQLQMWFCHR RLKDKKDGQS
0101: NKPVKSSVAA VQSASVNELP AAAGSVPEQD SRSDSGSESG CSPYSNSRRN FASGSSSSRA ELDEYETMGK PSYESRLSTM VHRAIVCIEA QLGEPLRDDG
0201: PILGMEFDPL PPGAFGTPIA MQKHLLHPYE SDLYERHDPR PRRSHAAARS FHEQQSLDDP SSFTPNMYER YSENHARGMD YEVARSRISS FMHANGPVPR
0301: SYVTPGHASR NCSTSQQDMP SPIESAHHGD RFLLEKDSSV LGTEDPYLLP DGVRKSSDVH RKGKINDGRL GRGSETRENH GPKDLEKLEI QRKKNEERMR
0401: KEMERNERER RKEEERLMRE RIKEEERLQR EQRREVERRE KFLQRENERA EKKKQKDEIR REKDAIRRKL AIEKATARRI AKESMDLIED EQLELMELAA
0501: ISKGLPSVLQ LDHDTLQNLE VYRDSLSTFP PKSLQLKMPF AISPWKDSDE TVGNLLMVWR FLISFSDVLD LWPFTLDEFI QAFHDYDSRL LGEIHVTLLR
0601: SIIRDVEDVA RTPFSGIGNN QYTTANPEGG HPQIVEGAYA WGFDIRSWKK HLNPLTWPEI LRQLALSAGF GPKLKKKHSR LTNTGDKDEA KGCEDVISTI
0701: RNGTAAESAF ASMREKGLLA PRKSRHRLTP GTVKFAAFHV LSLEGSKGLT VLELADKIQK SGLRDLTTSK TPEASISVAL TRDVKLFERI APSTYCVRAP
0801: YVKDPKDGEA ILADARKKIR AFENGFTGPE DVNDLERDED FEIDIDEDPE VDDLATLASA SKSAVLGEAN VLSGKGVDTM FCDVKADVKS ELEKEFSSPP
0901: PSTMKSIVPQ HSERHKNTVV GGVDAVIDES NQGQSWIQGL TEGDYCHLSV EERLNALVAL VGIANEGNSI RTGLEDRMEA ANALKKQMWA EAQLDNSCMR
1001: DVLKLDLQNL ASSKTESTIG LPIIQSSTRE RDSFDRDPSQ LLDETKPLED LSNDLHKSSA ERALINQDAN ISQENYASKR SRSQLKSYIG HKAEEVYPYR
1101: SLPLGQDRRH NRYWHFAVSV SKSDPCSRLL FVELHDGKWL LIDSEEAFDI LVASLDMRGI RESHLRIMLQ KIEGSFKENA CKDIKLARNP FLTEKSVVNH
1201: SPTDSVSPSS SAISGSNSDS METSTSIRVD LGRNDTENKN LSKRFHDFQR WMWTETYSSL PSCARKYGKK RSELLATCDA CVASYLSEYT FCSSCHQRLD
1301: VVDSSEILDS GLAVSPLPFG VRLLKPLLVF LEASVPDEAL ESFWTEDQRK KWGFRLNTSS SPGELLQVLT SLESAIKKES LSSNFMSAKE LLGAANAEAD
1401: DQGSVDVLPW IPKTVSAVAL RLSELDASII YVKPEKPEVI PEDENEQISL FPRDSPFKGK GPREQEDQDE VAPNPGNRNK KRARVSLGSG SNRKVKRKKA
1501: QSGLNKFVVG RRNVAVNSNL MAVELNHQVP GKGKRTVRKR PERIDEDNSH LVNRMANIVR PKSEEVEEDE EEEEQTFRDI NEDWAAGETP REMEEDWANE
1601: TPNRMMTPMQ VDDESDNSVG VESEDEDGGG QFVDYSQRNK WGLDWNSNLN VAIEEDEEEE VVGVGRVEGE DDAEMSESSE DDDVPANNAA NNYDRESEGY
1701: SSSDS
0101: NKPVKSSVAA VQSASVNELP AAAGSVPEQD SRSDSGSESG CSPYSNSRRN FASGSSSSRA ELDEYETMGK PSYESRLSTM VHRAIVCIEA QLGEPLRDDG
0201: PILGMEFDPL PPGAFGTPIA MQKHLLHPYE SDLYERHDPR PRRSHAAARS FHEQQSLDDP SSFTPNMYER YSENHARGMD YEVARSRISS FMHANGPVPR
0301: SYVTPGHASR NCSTSQQDMP SPIESAHHGD RFLLEKDSSV LGTEDPYLLP DGVRKSSDVH RKGKINDGRL GRGSETRENH GPKDLEKLEI QRKKNEERMR
0401: KEMERNERER RKEEERLMRE RIKEEERLQR EQRREVERRE KFLQRENERA EKKKQKDEIR REKDAIRRKL AIEKATARRI AKESMDLIED EQLELMELAA
0501: ISKGLPSVLQ LDHDTLQNLE VYRDSLSTFP PKSLQLKMPF AISPWKDSDE TVGNLLMVWR FLISFSDVLD LWPFTLDEFI QAFHDYDSRL LGEIHVTLLR
0601: SIIRDVEDVA RTPFSGIGNN QYTTANPEGG HPQIVEGAYA WGFDIRSWKK HLNPLTWPEI LRQLALSAGF GPKLKKKHSR LTNTGDKDEA KGCEDVISTI
0701: RNGTAAESAF ASMREKGLLA PRKSRHRLTP GTVKFAAFHV LSLEGSKGLT VLELADKIQK SGLRDLTTSK TPEASISVAL TRDVKLFERI APSTYCVRAP
0801: YVKDPKDGEA ILADARKKIR AFENGFTGPE DVNDLERDED FEIDIDEDPE VDDLATLASA SKSAVLGEAN VLSGKGVDTM FCDVKADVKS ELEKEFSSPP
0901: PSTMKSIVPQ HSERHKNTVV GGVDAVIDES NQGQSWIQGL TEGDYCHLSV EERLNALVAL VGIANEGNSI RTGLEDRMEA ANALKKQMWA EAQLDNSCMR
1001: DVLKLDLQNL ASSKTESTIG LPIIQSSTRE RDSFDRDPSQ LLDETKPLED LSNDLHKSSA ERALINQDAN ISQENYASKR SRSQLKSYIG HKAEEVYPYR
1101: SLPLGQDRRH NRYWHFAVSV SKSDPCSRLL FVELHDGKWL LIDSEEAFDI LVASLDMRGI RESHLRIMLQ KIEGSFKENA CKDIKLARNP FLTEKSVVNH
1201: SPTDSVSPSS SAISGSNSDS METSTSIRVD LGRNDTENKN LSKRFHDFQR WMWTETYSSL PSCARKYGKK RSELLATCDA CVASYLSEYT FCSSCHQRLD
1301: VVDSSEILDS GLAVSPLPFG VRLLKPLLVF LEASVPDEAL ESFWTEDQRK KWGFRLNTSS SPGELLQVLT SLESAIKKES LSSNFMSAKE LLGAANAEAD
1401: DQGSVDVLPW IPKTVSAVAL RLSELDASII YVKPEKPEVI PEDENEQISL FPRDSPFKGK GPREQEDQDE VAPNPGNRNK KRARVSLGSG SNRKVKRKKA
1501: QSGLNKFVVG RRNVAVNSNL MAVELNHQVP GKGKRTVRKR PERIDEDNSH LVNRMANIVR PKSEEVEEDE EEEEQTFRDI NEDWAAGETP REMEEDWANE
1601: TPNRMMTPMQ VDDESDNSVG VESEDEDGGG QFVDYSQRNK WGLDWNSNLN VAIEEDEEEE VVGVGRVEGE DDAEMSESSE DDDVPANNAA NNYDRESEGY
1701: SSSDS
Arabidopsis Description
RLT1Homeobox-DDT domain protein RLT1 [Source:UniProtKB/Swiss-Prot;Acc:F4HY56]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.