Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G245800.2 | Wheat | nucleus | 96.31 | 95.74 |
| TraesCS3A01G245700.2 | Wheat | nucleus | 96.26 | 95.74 |
| TraesCS3B01G273900.1 | Wheat | nucleus | 95.5 | 95.19 |
| Zm00001d043915_P002 | Maize | nucleus | 52.49 | 76.16 |
| KXG33081 | Sorghum | nucleus | 75.81 | 75.9 |
| KXG33083 | Sorghum | nucleus | 74.35 | 75.21 |
| Zm00001d011560_P012 | Maize | nucleus | 73.64 | 72.97 |
| Zm00001d043914_P001 | Maize | nucleus | 21.58 | 70.69 |
| OQU75646 | Sorghum | cytosol | 22.07 | 70.54 |
| HORVU1Hr1G087180.1 | Barley | nucleus | 63.5 | 63.06 |
| GSMUA_Achr9P06610_001 | Banana | nucleus | 54.07 | 56.23 |
| GSMUA_Achr8P27210_001 | Banana | nucleus | 57.21 | 55.26 |
| VIT_10s0003g00290.t01 | Wine grape | nucleus | 20.07 | 51.82 |
| VIT_12s0028g03090.t01 | Wine grape | nucleus | 42.03 | 50.85 |
| Solyc07g053610.2.1 | Tomato | nucleus | 43.87 | 45.4 |
| GSMUA_Achr6P26980_001 | Banana | nucleus | 54.39 | 44.7 |
| KRH21359 | Soybean | nucleus | 42.19 | 44.33 |
| KRH55891 | Soybean | nucleus | 41.92 | 43.4 |
| CDY22305 | Canola | nucleus | 38.56 | 43.38 |
| Bra033725.1-P | Field mustard | nucleus | 38.45 | 43.23 |
| KRH50116 | Soybean | nucleus | 41.54 | 42.99 |
| AT5G44180.1 | Thale cress | nucleus | 39.48 | 42.98 |
| KRH20389 | Soybean | nucleus | 41.81 | 42.93 |
| CDY35748 | Canola | nucleus | 35.85 | 42.7 |
| CDX94760 | Canola | nucleus | 38.5 | 42.62 |
| Bra010869.1-P | Field mustard | nucleus | 36.12 | 42.42 |
| CDX90154 | Canola | nucleus | 36.06 | 42.28 |
| VIT_10s0003g00270.t01 | Wine grape | nucleus | 25.16 | 41.39 |
| AT1G28420.1 | Thale cress | nucleus | 38.18 | 41.29 |
| Solyc02g077660.2.1 | Tomato | nucleus | 37.04 | 40.7 |
| Bra032908.1-P | Field mustard | nucleus | 36.61 | 40.61 |
| CDY34099 | Canola | nucleus | 36.55 | 40.48 |
| CDY65661 | Canola | nucleus | 36.28 | 40.01 |
| HORVU3Hr1G020400.11 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 10.14 | 25.0 |
| HORVU2Hr1G021950.4 | Barley | nucleus, plastid | 14.48 | 22.47 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.7 | UniProt:A0A287L9Z8 | ncoils:Coil | InterPro:DDT_dom | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:HB1/Asxl_HTH | EnsemblPlantsGene:HORVU3Hr1G061660 | EnsemblPlants:HORVU3Hr1G061660.1 | InterPro:Homeobox-like_sf |
| InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR018501 | PFAM:PF00046 | PFAM:PF02791 | PFAM:PF05066 |
| PFAM:PF15612 | PFAM:PF15613 | PFscan:PS50071 | PFscan:PS50827 | PANTHER:PTHR36968 | SMART:SM00389 |
| SMART:SM00571 | SUPFAM:SSF46689 | UniParc:UPI000B4691AC | InterPro:WHIM1_dom | InterPro:WHIM2_dom | SEG:seg |
Description
No Description!
Coordinates
chrchr3H:+:469100926..469127045
Molecular Weight (calculated)
206313.0 Da
IEP (calculated)
5.164
GRAVY (calculated)
-0.819
Length
1844 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDAGGGGDGP PREAPEERTP QTPAPPAPAS ASGGAAGPSG SGEKPVKRMM KTPYQLDVLE QTYLAEQYPS EAMRAELSVK IGLSDRQLQM WFCHRRLKDR
0101: KPPAKRQRRD EEGPATPVPV PPPVLPLQAM PLASTDLMMS AVSPYDEPLL PPTHSRRGAG RSSAVPRISA PDIGRRYYEP LPVMLPPPVA PMHFRQAELR
0201: VITSVESQLG EPLREDGPLL GVDFDPLPPG AFGAPIVPEQ QKQPARSYDT KIFSRHDPNL LKVSSFLPSM EHPFVPNSFA GKRKSTVGNP PLVHPHGGLR
0301: AVHEYQFLPE QPSDAYERAS RSHYYDTLVE GSNSRIPSLT PVPHLLHGSE EMAPSYAFEG QGLLPQSGRP QVFPAVSSDY EMNQSNSNIN SVPVDGQFGS
0401: SHVAGFEDPL ISSETRAYHD EDASRVDRKR KHNEEAKIAK EVEAHEKRIR KELEKQDILR RKREEQMRKE MERHDRERRK EEERLLRERQ REEERFQREQ
0501: RREHERMEKF LQKQSRRAEK QRQKEELRKE KEMARQKAAN ERATARRIAR EYMELVEDER LELMELAAQS KGLPSMLCLD SDTLLQLDSF RDMLSQFPPE
0601: MVRLKVPLSI RPWTGSEESV GKLLMVWKFL ITFADVLELS SVTLDEFIQS LHDYDSRLLG ELHVALLKSI IKDIEDVART PSVALGVNPG GGHPQIVEGA
0701: YSWGFNIRNW QRHLNLLTWP EILRQFALSA GFGPQLKKRN AEDVFYRDEN EGQDGQNVIS TLRNGSAAVR AAALMKERGY THRRSRHRLT PGTVKFAAFH
0801: VLSLEDSSGL TILEVAEKIQ KSGLRDLTTS KTPEASIAAA LSRDTKLFER TAPSTYCVKS PYRKDPAESE AVLSSAREKI RAFQNVLSDS EAEKEVDVDD
0901: VDRDEESDCD DDPDGDDVNI EVGDEKDPLL AVKAQGVVPT VTKVGDVKGD PDGLDTALTR PISSTTSRKD VAMLSLGDSS AVGTSSVSPL RASSDHREVI
1001: TGDAEGTQID ESNQGESWVQ GLAEGDYCDL SVEERLNALV ALVGVATEGN SIRAVLEERL EAANAVKKQM WAEAQLDKRR SKEEFASKVQ YNSYTSLKAD
1101: VIPENNATET TPTPVRNLDI DNDENAGTSN NNEILNQQSN AANVSYERNG TGQDASATPD NLSAQQYAHA DKTRSQLKSY IGHRAEQLYV YRSLPLGQDR
1201: RRNRYWQFST STSPNDPGSG RIFFESREGY WRIIDSEEVF DALVASLDTR GSREAQLHSM LQRVESTFKE GIKRKRTAAI EQSAGRYLKN GATDTMRASY
1301: RSEFGSPSST LSSVSADSAT TYSDSFKIEL GRNDVEKISI SKRADGFLKW MWRECCDRQL TCAMKYGKKR CSALLHSCNY CYQIYLAEER HCSFCHKTFK
1401: SIYNYSEHTS QCEEKRRIDP NWKMQIADYS VPIGMRLLKL QLATIEASIP SEALQPFWSD GYRKSWGVKL HSTTSVEEIF QMLTLLEGAI RRDCLSSDFE
1501: TSNELLNNLK TEDIPSQNLS SLPGTSVLPW VPDTTAAITL RMLDLDYAVS YVQNQKKERD SGDSMKLASR YTVKKAQDIE PLEPTGFDLY DARGPPSSGR
1601: RGRGRGSRGG SRGGRGRSRG GRIPRGISSS SRIEYIYEDA AYEKAPRKNA RRGRGRGRGR RRGRRTVRPR QPSSEGRGRS IPKANLLGSF SMLSNVKPSA
1701: VEESPRSSGA EEWGLESRRP YIQGEGDENS SGSESDQSED NEENGQPMDE EYEEEQVPDY SRAYSGGPRP HAHGMMDDET EDDDEDAEGD GEGDEEEYDV
1801: NQASADVDDE MDEDDDIGDD GDDGVEVNAD EDEGATSYSS DYSE
0101: KPPAKRQRRD EEGPATPVPV PPPVLPLQAM PLASTDLMMS AVSPYDEPLL PPTHSRRGAG RSSAVPRISA PDIGRRYYEP LPVMLPPPVA PMHFRQAELR
0201: VITSVESQLG EPLREDGPLL GVDFDPLPPG AFGAPIVPEQ QKQPARSYDT KIFSRHDPNL LKVSSFLPSM EHPFVPNSFA GKRKSTVGNP PLVHPHGGLR
0301: AVHEYQFLPE QPSDAYERAS RSHYYDTLVE GSNSRIPSLT PVPHLLHGSE EMAPSYAFEG QGLLPQSGRP QVFPAVSSDY EMNQSNSNIN SVPVDGQFGS
0401: SHVAGFEDPL ISSETRAYHD EDASRVDRKR KHNEEAKIAK EVEAHEKRIR KELEKQDILR RKREEQMRKE MERHDRERRK EEERLLRERQ REEERFQREQ
0501: RREHERMEKF LQKQSRRAEK QRQKEELRKE KEMARQKAAN ERATARRIAR EYMELVEDER LELMELAAQS KGLPSMLCLD SDTLLQLDSF RDMLSQFPPE
0601: MVRLKVPLSI RPWTGSEESV GKLLMVWKFL ITFADVLELS SVTLDEFIQS LHDYDSRLLG ELHVALLKSI IKDIEDVART PSVALGVNPG GGHPQIVEGA
0701: YSWGFNIRNW QRHLNLLTWP EILRQFALSA GFGPQLKKRN AEDVFYRDEN EGQDGQNVIS TLRNGSAAVR AAALMKERGY THRRSRHRLT PGTVKFAAFH
0801: VLSLEDSSGL TILEVAEKIQ KSGLRDLTTS KTPEASIAAA LSRDTKLFER TAPSTYCVKS PYRKDPAESE AVLSSAREKI RAFQNVLSDS EAEKEVDVDD
0901: VDRDEESDCD DDPDGDDVNI EVGDEKDPLL AVKAQGVVPT VTKVGDVKGD PDGLDTALTR PISSTTSRKD VAMLSLGDSS AVGTSSVSPL RASSDHREVI
1001: TGDAEGTQID ESNQGESWVQ GLAEGDYCDL SVEERLNALV ALVGVATEGN SIRAVLEERL EAANAVKKQM WAEAQLDKRR SKEEFASKVQ YNSYTSLKAD
1101: VIPENNATET TPTPVRNLDI DNDENAGTSN NNEILNQQSN AANVSYERNG TGQDASATPD NLSAQQYAHA DKTRSQLKSY IGHRAEQLYV YRSLPLGQDR
1201: RRNRYWQFST STSPNDPGSG RIFFESREGY WRIIDSEEVF DALVASLDTR GSREAQLHSM LQRVESTFKE GIKRKRTAAI EQSAGRYLKN GATDTMRASY
1301: RSEFGSPSST LSSVSADSAT TYSDSFKIEL GRNDVEKISI SKRADGFLKW MWRECCDRQL TCAMKYGKKR CSALLHSCNY CYQIYLAEER HCSFCHKTFK
1401: SIYNYSEHTS QCEEKRRIDP NWKMQIADYS VPIGMRLLKL QLATIEASIP SEALQPFWSD GYRKSWGVKL HSTTSVEEIF QMLTLLEGAI RRDCLSSDFE
1501: TSNELLNNLK TEDIPSQNLS SLPGTSVLPW VPDTTAAITL RMLDLDYAVS YVQNQKKERD SGDSMKLASR YTVKKAQDIE PLEPTGFDLY DARGPPSSGR
1601: RGRGRGSRGG SRGGRGRSRG GRIPRGISSS SRIEYIYEDA AYEKAPRKNA RRGRGRGRGR RRGRRTVRPR QPSSEGRGRS IPKANLLGSF SMLSNVKPSA
1701: VEESPRSSGA EEWGLESRRP YIQGEGDENS SGSESDQSED NEENGQPMDE EYEEEQVPDY SRAYSGGPRP HAHGMMDDET EDDDEDAEGD GEGDEEEYDV
1801: NQASADVDDE MDEDDDIGDD GDDGVEVNAD EDEGATSYSS DYSE
0001: MEGGSEKTTP EGCGGESKSK RKMKTAAQLE VLENTYSAEP YPSEAIRADL SVKLNLSDRQ LQMWFCHRRL KERKSTTPSK RQRKELVTPT AMESWEPPVN
0101: AGDLVAGNEL DSRRAARGSG GSGVTVVRRF NEPSSAEVRA IGYVEAQLGE RLRDNGPVLG MEFDPLPPGA FGMPIEMPSH RKATRQAFET NIYVRSDVKP
0201: IKDHVRPIRE YQFIPELPSS RTDHSERVSP SHHFGVPLDG SVMRVSAVSA GHRDDYKISP QIPNLNLATH QGKPGHVYSP NLVEYDSPYQ KSYMDTAAQV
0301: HDDPFVKSER EVGNEDEDDD ALQLERHRKN EEARIAREVE AHEKRIRREL EKQDMLRRKR EEQIRKEMER QDRERRKEEE RLLREKQREE ERYLKEQMRE
0401: LQRREKFLKK ETIRAEKMRQ KEEMRKEKEV ARLKAANERA IARKIAKESM ELIEDERLEL MEVAALTKGL PSMLALDFET LQNLDEYRDK QAIFPPTSVK
0501: LKKPFAVKPW NGSDENVANL LMVWRFLITF ADVLGLWPFT LDEFAQAFHD YDPRLMGEIH IVLLKTIIKD IEGVVRTLST GVGANQNVAA NPGGGHPHVV
0601: EGAYAWGFDI RSWRKNLNVF TWPEILRQLA LSAGLGPQLK KMNIRTVSVH DDNEANNSEN VIFNLRKGVA AENAFAKMQE RGLSNPRRSR HRLTPGTVKF
0701: AAFHVLSLEG EKGLNILEVA EKIQKSGLRD LTTSRTPEAS VAAALSRDTK LFERVAPSTY CVRASYRKDA GDAETIFAEA RERIRAFKSG ITDVEDVDDA
0801: ERDEDSESDV GEDPEVDVNL KKEDPNPLKV ENLIGVEPLL ENGKLDTVPM KTELGLPLTP SLPEEMKDEK RDDTLADQSL EDAVANGEDS ACFDESKLGE
0901: QWVQGLVEGD YSNLSSEERL NALVALIGIA TEGNTIRIAL EERLEVASAL KKQMWGEVQL DKRWKEESLI RANYLSYPTA KPGLNIATPA SGNQESSSAD
1001: VTPISSQDPV SLPQIDVNNV IAGPSLQLQE NVPGVENLQY QQQQGYTADR ERLRAQLKAY VGYKAEELYV YRSLPLGQDR RRNRYWRFSA SASRNDPGCG
1101: RIFVELQDGR WRLIDSEEAF DYLVKSLDVR GVRESHLHFM LLKIEASFKE ALRRNVAANP GVCSISSSLD SDTAEISTTF KIELGDSNAV ERCSVLQRFH
1201: SFEKWMWDNM LHPSALSAFK YGAKQSSPLF RICRICAELH FVGDICCPSC GQMHAGPDVG ELCFAEQVAQ LGDNLRRGDT GFILRSSILS PLRIRLLKVQ
1301: LALVEASLPP EGLEAFWTEN LRKSWGMKLL SSSSHEDLYQ VLTTLEAALK RDFLSSNFET TSELLGLQEG ALASDLTCGV NVLPWIPKTA GGVALRLFDF
1401: DSSIVYTPDQ NNDPLKDKES EDFVGLETNI LRNLHEKDVM ETPVQVAAYK QEENWTDPGL GGVSSSGRGG RPPRGRGRPR ARGNGKKPAV SVKPPRGAAN
1501: SNGETMLRPR AQPRGGRKNG RRSGTKGRKR PTQGTLGICN EVGGGRRVKE VAVTAKTSLP DNDDDWIETP ELQDDDGEAS SSGRSFQYED YDDDDVMAPI
1601: DDFDGGGESS KLVGRGEFSL HSDDEYEEEE EEEEDMNMKM DVNVVDDEDE DYINEDSYGR KQHGISISND AATRKRFNKF EDPDLTSSSS SDFQ
0101: AGDLVAGNEL DSRRAARGSG GSGVTVVRRF NEPSSAEVRA IGYVEAQLGE RLRDNGPVLG MEFDPLPPGA FGMPIEMPSH RKATRQAFET NIYVRSDVKP
0201: IKDHVRPIRE YQFIPELPSS RTDHSERVSP SHHFGVPLDG SVMRVSAVSA GHRDDYKISP QIPNLNLATH QGKPGHVYSP NLVEYDSPYQ KSYMDTAAQV
0301: HDDPFVKSER EVGNEDEDDD ALQLERHRKN EEARIAREVE AHEKRIRREL EKQDMLRRKR EEQIRKEMER QDRERRKEEE RLLREKQREE ERYLKEQMRE
0401: LQRREKFLKK ETIRAEKMRQ KEEMRKEKEV ARLKAANERA IARKIAKESM ELIEDERLEL MEVAALTKGL PSMLALDFET LQNLDEYRDK QAIFPPTSVK
0501: LKKPFAVKPW NGSDENVANL LMVWRFLITF ADVLGLWPFT LDEFAQAFHD YDPRLMGEIH IVLLKTIIKD IEGVVRTLST GVGANQNVAA NPGGGHPHVV
0601: EGAYAWGFDI RSWRKNLNVF TWPEILRQLA LSAGLGPQLK KMNIRTVSVH DDNEANNSEN VIFNLRKGVA AENAFAKMQE RGLSNPRRSR HRLTPGTVKF
0701: AAFHVLSLEG EKGLNILEVA EKIQKSGLRD LTTSRTPEAS VAAALSRDTK LFERVAPSTY CVRASYRKDA GDAETIFAEA RERIRAFKSG ITDVEDVDDA
0801: ERDEDSESDV GEDPEVDVNL KKEDPNPLKV ENLIGVEPLL ENGKLDTVPM KTELGLPLTP SLPEEMKDEK RDDTLADQSL EDAVANGEDS ACFDESKLGE
0901: QWVQGLVEGD YSNLSSEERL NALVALIGIA TEGNTIRIAL EERLEVASAL KKQMWGEVQL DKRWKEESLI RANYLSYPTA KPGLNIATPA SGNQESSSAD
1001: VTPISSQDPV SLPQIDVNNV IAGPSLQLQE NVPGVENLQY QQQQGYTADR ERLRAQLKAY VGYKAEELYV YRSLPLGQDR RRNRYWRFSA SASRNDPGCG
1101: RIFVELQDGR WRLIDSEEAF DYLVKSLDVR GVRESHLHFM LLKIEASFKE ALRRNVAANP GVCSISSSLD SDTAEISTTF KIELGDSNAV ERCSVLQRFH
1201: SFEKWMWDNM LHPSALSAFK YGAKQSSPLF RICRICAELH FVGDICCPSC GQMHAGPDVG ELCFAEQVAQ LGDNLRRGDT GFILRSSILS PLRIRLLKVQ
1301: LALVEASLPP EGLEAFWTEN LRKSWGMKLL SSSSHEDLYQ VLTTLEAALK RDFLSSNFET TSELLGLQEG ALASDLTCGV NVLPWIPKTA GGVALRLFDF
1401: DSSIVYTPDQ NNDPLKDKES EDFVGLETNI LRNLHEKDVM ETPVQVAAYK QEENWTDPGL GGVSSSGRGG RPPRGRGRPR ARGNGKKPAV SVKPPRGAAN
1501: SNGETMLRPR AQPRGGRKNG RRSGTKGRKR PTQGTLGICN EVGGGRRVKE VAVTAKTSLP DNDDDWIETP ELQDDDGEAS SSGRSFQYED YDDDDVMAPI
1601: DDFDGGGESS KLVGRGEFSL HSDDEYEEEE EEEEDMNMKM DVNVVDDEDE DYINEDSYGR KQHGISISND AATRKRFNKF EDPDLTSSSS SDFQ
Arabidopsis Description
RLT2Homeobox-DDT domain protein RLT2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFH1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.