Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU75646 | Sorghum | cytosol | 30.4 | 97.05 |
| KXG33083 | Sorghum | nucleus | 95.98 | 96.98 |
| Zm00001d043915_P002 | Maize | nucleus | 62.38 | 90.4 |
| Zm00001d043914_P001 | Maize | nucleus | 27.47 | 89.88 |
| Zm00001d011560_P012 | Maize | nucleus | 88.71 | 87.8 |
| TraesCS3D01G245800.2 | Wheat | nucleus | 76.38 | 75.85 |
| HORVU3Hr1G061660.1 | Barley | nucleus | 75.9 | 75.81 |
| TraesCS3A01G245700.2 | Wheat | nucleus | 76.28 | 75.78 |
| TraesCS3B01G273900.1 | Wheat | nucleus | 75.57 | 75.24 |
| GSMUA_Achr9P06610_001 | Banana | nucleus | 53.09 | 55.16 |
| GSMUA_Achr8P27210_001 | Banana | nucleus | 56.84 | 54.85 |
| VIT_10s0003g00290.t01 | Wine grape | nucleus | 19.92 | 51.4 |
| VIT_12s0028g03090.t01 | Wine grape | nucleus | 41.42 | 50.07 |
| Solyc07g053610.2.1 | Tomato | nucleus | 43.54 | 45.01 |
| GSMUA_Achr6P26980_001 | Banana | nucleus | 54.67 | 44.88 |
| KRH21359 | Soybean | nucleus | 41.86 | 43.93 |
| AT5G44180.1 | Thale cress | nucleus | 40.34 | 43.86 |
| KRH55891 | Soybean | nucleus | 42.35 | 43.8 |
| CDY22305 | Canola | nucleus | 38.87 | 43.69 |
| Bra033725.1-P | Field mustard | nucleus | 38.87 | 43.66 |
| KRH20389 | Soybean | nucleus | 42.13 | 43.21 |
| CDX94760 | Canola | nucleus | 39.03 | 43.16 |
| KRH50116 | Soybean | nucleus | 41.59 | 42.99 |
| CDY35748 | Canola | nucleus | 36.05 | 42.89 |
| Bra010869.1-P | Field mustard | nucleus | 36.43 | 42.74 |
| CDX90154 | Canola | nucleus | 36.32 | 42.53 |
| VIT_10s0003g00270.t01 | Wine grape | nucleus | 25.52 | 41.93 |
| AT1G28420.1 | Thale cress | nucleus | 38.16 | 41.23 |
| Solyc02g077660.2.1 | Tomato | nucleus | 37.46 | 41.12 |
| Bra032908.1-P | Field mustard | nucleus | 36.81 | 40.79 |
| CDY34099 | Canola | nucleus | 36.75 | 40.66 |
| CDY65661 | Canola | nucleus | 36.59 | 40.31 |
| EER90701 | Sorghum | nucleus | 15.91 | 25.54 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.7 | UniProt:A0A1B6Q591 | ncoils:Coil | InterPro:DDT_dom | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:HB1/Asxl_HTH | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 |
| InterPro:IPR018501 | EnsemblPlants:KXG33081 | ProteinID:KXG33081 | ProteinID:KXG33081.1 | PFAM:PF00046 | PFAM:PF02791 |
| PFAM:PF05066 | PFAM:PF15612 | PFAM:PF15613 | PFscan:PS50071 | PFscan:PS50827 | PANTHER:PTHR36968 |
| SMART:SM00389 | SMART:SM00571 | EnsemblPlantsGene:SORBI_3003G252100 | SUPFAM:SSF46689 | UniParc:UPI00081AB694 | InterPro:WHIM1_dom |
| InterPro:WHIM2_dom | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:+:59014845..59033236
Molecular Weight (calculated)
205303.0 Da
IEP (calculated)
5.263
GRAVY (calculated)
-0.780
Length
1842 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDAGGDGDGD GAGKATQEAP AEATTPPPAP VAAPVPVSAS ATGAGAGTSG SGEKPVKRMM KTPYQLEVLE KTYAAEQYPS EAMRLELSAK IGLSDRQLQM
0101: WFCHRRLKDR KPPTKRQRRE EESALAPVMP PPPVLPAPVS VMPLASSDLM VGAPGPYDEP LHPVHSRRGA GRSSAVPRIS MPDIGRRYYE PTPIMIAPAI
0201: PSMQLTQSEL RVINSVESQL GEPLREDGPA LGVEFDPLPP GAFGAPIVPE QQKQPVRSYD TKIFSRHDQK LLKASAFLPT MESPFVPNSF TGKRKSTVGN
0301: TPIVQPHVGS RAVHEYQFLP EQPSDTYERA SRSHYYDTPV EVSNSRISSL TSGSQLLHGS EAAAPSYAFQ GHTSGSSLMP QPSRSQVFPG APADYETTQS
0401: NSNLNSVPVE GQFDISQVAA FENPLVSSER RAYHDEDTSR VERKRKHNEE AKIAKEVEAH ERRIRKELEK QDILNRKREE QRRKEMERLD RERRKEEERL
0501: LRERQREEER FQREQRREHE RMEKLLQKQS RRAEKQRQKE ELRKEKEAAR QKAANERATA RRIAREYMEL VEDERLELME LAAQNKGLPS MLHLDSDTLQ
0601: QLDSFRGMLS QFPPTTVRLK LPFSIKPWTG SEDNVGKLLM VWKFFITFTD VLGLCPVTLD EFVQSLHDYD SRLLGELHVA LLKSIIKDIE DVARTQSIAL
0701: GVNPGGHPQI VEGAYAWGFN IRSWQRHLNL LTWPEILRQF ALSAGFGPQL KKRTVEDSYY RNDNEGHDGE NVISTLRNGS AAVNAAAKMK ERGYTNRRRS
0801: RHRLTPGTVK FAAFHVLSLE GSKGLTILEV AEKIQKSGLR DLTTSKTPEA SIAAALSRDA KLFERTAPST YCVKSPYRKD PADSEAVLSA AREKIRAFQN
0901: VLSDSEAEKE ADEAERDDDS ECDDADDDPD GDDVNTEVED DKDPPLAVKA QDEVPSTTTV IGIRSELDSV GNALNSSSSF TKSAKGTPLP SLGKSDAADT
1001: SNDSPLGGSS ANHEVAPGDS ENTQIDESNQ VEPWVRALAE GDYCDLSVEE RLNALVALVG VATEGNSIRG VLEERLELAN ALKKQMWAEA QLDKRRSKEE
1101: FASRVQYNSD MGLKADLYQE NNATENDGHV GTMNSCEMLD QHNQGNFGSM AYERNGIGQE ILATPDTSYV QQYAYADKTR SQLKSYIGHR AEQLYVYRSL
1201: PLGQDRRRNR YWQFTTSASP NDPGSGRIFF ESKDGCWRVI DSEEAFDSLV AALDTRGSRE AQLHSMLQVI EPTFKEAIKR RSASIELPAG RYPKNGATDM
1301: IRANYHSEVG SSSSTPFGAT SDIVTAYSDS FKVELGRNDF EKTAISKRAD KFLKWMWREC YNQELTCAMK YGKKRCSELL HSCNCCYQIY LAEERHCPSC
1401: HKTFKSIYNF SDHTTQCEEK RRTDPYWKMQ IADYSVPIGM VLLKLQLVTI EACIPSEALQ PFWTDVYRKS WSVKLYTTKS IAETFQLLTV LEGAIRPGCL
1501: SSDFETTSEC LNSQGIAPHN PVLPAGSASA LPWVPDTTSA VMLRMLDLDS AISYVQNQKM ERDDGGFMKF PSRYTVAKSK QEGILEPTGL NLYDGRWLPG
1601: SGRRGRGRGS RGGSRGGRGR SRGGRIPRGV SSSSRIEFKD DIVASDKAPR KNARRGRARG RGSRRGRRTV RPRQPSAGRA RSIPKENLLG SFSMLSSSKP
1701: APVEESPQSS GADEWGLETR VTYNECDENS SGSESEDNEE NGQPMDEDYE EHVPDYSVGY SSRSRHHGTM SMMDHETDEE DDDAEGDENV EEDDADQAVD
1801: DADVEMDEDD EIGDDGEDGN LGGEMNADED PDATSYSSDY SE
0101: WFCHRRLKDR KPPTKRQRRE EESALAPVMP PPPVLPAPVS VMPLASSDLM VGAPGPYDEP LHPVHSRRGA GRSSAVPRIS MPDIGRRYYE PTPIMIAPAI
0201: PSMQLTQSEL RVINSVESQL GEPLREDGPA LGVEFDPLPP GAFGAPIVPE QQKQPVRSYD TKIFSRHDQK LLKASAFLPT MESPFVPNSF TGKRKSTVGN
0301: TPIVQPHVGS RAVHEYQFLP EQPSDTYERA SRSHYYDTPV EVSNSRISSL TSGSQLLHGS EAAAPSYAFQ GHTSGSSLMP QPSRSQVFPG APADYETTQS
0401: NSNLNSVPVE GQFDISQVAA FENPLVSSER RAYHDEDTSR VERKRKHNEE AKIAKEVEAH ERRIRKELEK QDILNRKREE QRRKEMERLD RERRKEEERL
0501: LRERQREEER FQREQRREHE RMEKLLQKQS RRAEKQRQKE ELRKEKEAAR QKAANERATA RRIAREYMEL VEDERLELME LAAQNKGLPS MLHLDSDTLQ
0601: QLDSFRGMLS QFPPTTVRLK LPFSIKPWTG SEDNVGKLLM VWKFFITFTD VLGLCPVTLD EFVQSLHDYD SRLLGELHVA LLKSIIKDIE DVARTQSIAL
0701: GVNPGGHPQI VEGAYAWGFN IRSWQRHLNL LTWPEILRQF ALSAGFGPQL KKRTVEDSYY RNDNEGHDGE NVISTLRNGS AAVNAAAKMK ERGYTNRRRS
0801: RHRLTPGTVK FAAFHVLSLE GSKGLTILEV AEKIQKSGLR DLTTSKTPEA SIAAALSRDA KLFERTAPST YCVKSPYRKD PADSEAVLSA AREKIRAFQN
0901: VLSDSEAEKE ADEAERDDDS ECDDADDDPD GDDVNTEVED DKDPPLAVKA QDEVPSTTTV IGIRSELDSV GNALNSSSSF TKSAKGTPLP SLGKSDAADT
1001: SNDSPLGGSS ANHEVAPGDS ENTQIDESNQ VEPWVRALAE GDYCDLSVEE RLNALVALVG VATEGNSIRG VLEERLELAN ALKKQMWAEA QLDKRRSKEE
1101: FASRVQYNSD MGLKADLYQE NNATENDGHV GTMNSCEMLD QHNQGNFGSM AYERNGIGQE ILATPDTSYV QQYAYADKTR SQLKSYIGHR AEQLYVYRSL
1201: PLGQDRRRNR YWQFTTSASP NDPGSGRIFF ESKDGCWRVI DSEEAFDSLV AALDTRGSRE AQLHSMLQVI EPTFKEAIKR RSASIELPAG RYPKNGATDM
1301: IRANYHSEVG SSSSTPFGAT SDIVTAYSDS FKVELGRNDF EKTAISKRAD KFLKWMWREC YNQELTCAMK YGKKRCSELL HSCNCCYQIY LAEERHCPSC
1401: HKTFKSIYNF SDHTTQCEEK RRTDPYWKMQ IADYSVPIGM VLLKLQLVTI EACIPSEALQ PFWTDVYRKS WSVKLYTTKS IAETFQLLTV LEGAIRPGCL
1501: SSDFETTSEC LNSQGIAPHN PVLPAGSASA LPWVPDTTSA VMLRMLDLDS AISYVQNQKM ERDDGGFMKF PSRYTVAKSK QEGILEPTGL NLYDGRWLPG
1601: SGRRGRGRGS RGGSRGGRGR SRGGRIPRGV SSSSRIEFKD DIVASDKAPR KNARRGRARG RGSRRGRRTV RPRQPSAGRA RSIPKENLLG SFSMLSSSKP
1701: APVEESPQSS GADEWGLETR VTYNECDENS SGSESEDNEE NGQPMDEDYE EHVPDYSVGY SSRSRHHGTM SMMDHETDEE DDDAEGDENV EEDDADQAVD
1801: DADVEMDEDD EIGDDGEDGN LGGEMNADED PDATSYSSDY SE
0001: MEGGSEKTTP EGCGGESKSK RKMKTAAQLE VLENTYSAEP YPSEAIRADL SVKLNLSDRQ LQMWFCHRRL KERKSTTPSK RQRKELVTPT AMESWEPPVN
0101: AGDLVAGNEL DSRRAARGSG GSGVTVVRRF NEPSSAEVRA IGYVEAQLGE RLRDNGPVLG MEFDPLPPGA FGMPIEMPSH RKATRQAFET NIYVRSDVKP
0201: IKDHVRPIRE YQFIPELPSS RTDHSERVSP SHHFGVPLDG SVMRVSAVSA GHRDDYKISP QIPNLNLATH QGKPGHVYSP NLVEYDSPYQ KSYMDTAAQV
0301: HDDPFVKSER EVGNEDEDDD ALQLERHRKN EEARIAREVE AHEKRIRREL EKQDMLRRKR EEQIRKEMER QDRERRKEEE RLLREKQREE ERYLKEQMRE
0401: LQRREKFLKK ETIRAEKMRQ KEEMRKEKEV ARLKAANERA IARKIAKESM ELIEDERLEL MEVAALTKGL PSMLALDFET LQNLDEYRDK QAIFPPTSVK
0501: LKKPFAVKPW NGSDENVANL LMVWRFLITF ADVLGLWPFT LDEFAQAFHD YDPRLMGEIH IVLLKTIIKD IEGVVRTLST GVGANQNVAA NPGGGHPHVV
0601: EGAYAWGFDI RSWRKNLNVF TWPEILRQLA LSAGLGPQLK KMNIRTVSVH DDNEANNSEN VIFNLRKGVA AENAFAKMQE RGLSNPRRSR HRLTPGTVKF
0701: AAFHVLSLEG EKGLNILEVA EKIQKSGLRD LTTSRTPEAS VAAALSRDTK LFERVAPSTY CVRASYRKDA GDAETIFAEA RERIRAFKSG ITDVEDVDDA
0801: ERDEDSESDV GEDPEVDVNL KKEDPNPLKV ENLIGVEPLL ENGKLDTVPM KTELGLPLTP SLPEEMKDEK RDDTLADQSL EDAVANGEDS ACFDESKLGE
0901: QWVQGLVEGD YSNLSSEERL NALVALIGIA TEGNTIRIAL EERLEVASAL KKQMWGEVQL DKRWKEESLI RANYLSYPTA KPGLNIATPA SGNQESSSAD
1001: VTPISSQDPV SLPQIDVNNV IAGPSLQLQE NVPGVENLQY QQQQGYTADR ERLRAQLKAY VGYKAEELYV YRSLPLGQDR RRNRYWRFSA SASRNDPGCG
1101: RIFVELQDGR WRLIDSEEAF DYLVKSLDVR GVRESHLHFM LLKIEASFKE ALRRNVAANP GVCSISSSLD SDTAEISTTF KIELGDSNAV ERCSVLQRFH
1201: SFEKWMWDNM LHPSALSAFK YGAKQSSPLF RICRICAELH FVGDICCPSC GQMHAGPDVG ELCFAEQVAQ LGDNLRRGDT GFILRSSILS PLRIRLLKVQ
1301: LALVEASLPP EGLEAFWTEN LRKSWGMKLL SSSSHEDLYQ VLTTLEAALK RDFLSSNFET TSELLGLQEG ALASDLTCGV NVLPWIPKTA GGVALRLFDF
1401: DSSIVYTPDQ NNDPLKDKES EDFVGLETNI LRNLHEKDVM ETPVQVAAYK QEENWTDPGL GGVSSSGRGG RPPRGRGRPR ARGNGKKPAV SVKPPRGAAN
1501: SNGETMLRPR AQPRGGRKNG RRSGTKGRKR PTQGTLGICN EVGGGRRVKE VAVTAKTSLP DNDDDWIETP ELQDDDGEAS SSGRSFQYED YDDDDVMAPI
1601: DDFDGGGESS KLVGRGEFSL HSDDEYEEEE EEEEDMNMKM DVNVVDDEDE DYINEDSYGR KQHGISISND AATRKRFNKF EDPDLTSSSS SDFQ
0101: AGDLVAGNEL DSRRAARGSG GSGVTVVRRF NEPSSAEVRA IGYVEAQLGE RLRDNGPVLG MEFDPLPPGA FGMPIEMPSH RKATRQAFET NIYVRSDVKP
0201: IKDHVRPIRE YQFIPELPSS RTDHSERVSP SHHFGVPLDG SVMRVSAVSA GHRDDYKISP QIPNLNLATH QGKPGHVYSP NLVEYDSPYQ KSYMDTAAQV
0301: HDDPFVKSER EVGNEDEDDD ALQLERHRKN EEARIAREVE AHEKRIRREL EKQDMLRRKR EEQIRKEMER QDRERRKEEE RLLREKQREE ERYLKEQMRE
0401: LQRREKFLKK ETIRAEKMRQ KEEMRKEKEV ARLKAANERA IARKIAKESM ELIEDERLEL MEVAALTKGL PSMLALDFET LQNLDEYRDK QAIFPPTSVK
0501: LKKPFAVKPW NGSDENVANL LMVWRFLITF ADVLGLWPFT LDEFAQAFHD YDPRLMGEIH IVLLKTIIKD IEGVVRTLST GVGANQNVAA NPGGGHPHVV
0601: EGAYAWGFDI RSWRKNLNVF TWPEILRQLA LSAGLGPQLK KMNIRTVSVH DDNEANNSEN VIFNLRKGVA AENAFAKMQE RGLSNPRRSR HRLTPGTVKF
0701: AAFHVLSLEG EKGLNILEVA EKIQKSGLRD LTTSRTPEAS VAAALSRDTK LFERVAPSTY CVRASYRKDA GDAETIFAEA RERIRAFKSG ITDVEDVDDA
0801: ERDEDSESDV GEDPEVDVNL KKEDPNPLKV ENLIGVEPLL ENGKLDTVPM KTELGLPLTP SLPEEMKDEK RDDTLADQSL EDAVANGEDS ACFDESKLGE
0901: QWVQGLVEGD YSNLSSEERL NALVALIGIA TEGNTIRIAL EERLEVASAL KKQMWGEVQL DKRWKEESLI RANYLSYPTA KPGLNIATPA SGNQESSSAD
1001: VTPISSQDPV SLPQIDVNNV IAGPSLQLQE NVPGVENLQY QQQQGYTADR ERLRAQLKAY VGYKAEELYV YRSLPLGQDR RRNRYWRFSA SASRNDPGCG
1101: RIFVELQDGR WRLIDSEEAF DYLVKSLDVR GVRESHLHFM LLKIEASFKE ALRRNVAANP GVCSISSSLD SDTAEISTTF KIELGDSNAV ERCSVLQRFH
1201: SFEKWMWDNM LHPSALSAFK YGAKQSSPLF RICRICAELH FVGDICCPSC GQMHAGPDVG ELCFAEQVAQ LGDNLRRGDT GFILRSSILS PLRIRLLKVQ
1301: LALVEASLPP EGLEAFWTEN LRKSWGMKLL SSSSHEDLYQ VLTTLEAALK RDFLSSNFET TSELLGLQEG ALASDLTCGV NVLPWIPKTA GGVALRLFDF
1401: DSSIVYTPDQ NNDPLKDKES EDFVGLETNI LRNLHEKDVM ETPVQVAAYK QEENWTDPGL GGVSSSGRGG RPPRGRGRPR ARGNGKKPAV SVKPPRGAAN
1501: SNGETMLRPR AQPRGGRKNG RRSGTKGRKR PTQGTLGICN EVGGGRRVKE VAVTAKTSLP DNDDDWIETP ELQDDDGEAS SSGRSFQYED YDDDDVMAPI
1601: DDFDGGGESS KLVGRGEFSL HSDDEYEEEE EEEEDMNMKM DVNVVDDEDE DYINEDSYGR KQHGISISND AATRKRFNKF EDPDLTSSSS SDFQ
Arabidopsis Description
RLT2Homeobox-DDT domain protein RLT2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFH1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.