Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G245700.2 | Wheat | nucleus | 98.33 | 98.38 |
| TraesCS3B01G273900.1 | Wheat | nucleus | 97.74 | 98.0 |
| HORVU3Hr1G061660.1 | Barley | nucleus | 95.74 | 96.31 |
| Zm00001d043915_P002 | Maize | nucleus | 52.78 | 77.03 |
| KXG33081 | Sorghum | nucleus | 75.85 | 76.38 |
| KXG33083 | Sorghum | nucleus | 74.29 | 75.59 |
| Zm00001d011560_P012 | Maize | nucleus | 74.07 | 73.83 |
| Zm00001d043914_P001 | Maize | nucleus | 21.46 | 70.69 |
| OQU75646 | Sorghum | cytosol | 21.89 | 70.36 |
| TraesCS1D01G403700.1 | Wheat | nucleus | 64.1 | 64.2 |
| GSMUA_Achr9P06610_001 | Banana | nucleus | 54.02 | 56.51 |
| GSMUA_Achr8P27210_001 | Banana | nucleus | 57.14 | 55.53 |
| VIT_10s0003g00290.t01 | Wine grape | nucleus | 19.84 | 51.54 |
| VIT_12s0028g03090.t01 | Wine grape | nucleus | 41.99 | 51.12 |
| Solyc07g053610.2.1 | Tomato | nucleus | 44.04 | 45.85 |
| GSMUA_Achr6P26980_001 | Banana | nucleus | 54.82 | 45.32 |
| KRH21359 | Soybean | nucleus | 42.1 | 44.5 |
| KRH55891 | Soybean | nucleus | 41.89 | 43.63 |
| CDY22305 | Canola | nucleus | 38.17 | 43.2 |
| Bra033725.1-P | Field mustard | nucleus | 38.06 | 43.05 |
| AT5G44180.1 | Thale cress | nucleus | 39.19 | 42.92 |
| CDY35748 | Canola | nucleus | 35.8 | 42.89 |
| KRH50116 | Soybean | nucleus | 41.13 | 42.82 |
| KRH20389 | Soybean | nucleus | 41.35 | 42.71 |
| Bra010869.1-P | Field mustard | nucleus | 36.06 | 42.61 |
| CDX90154 | Canola | nucleus | 36.06 | 42.53 |
| CDX94760 | Canola | nucleus | 38.11 | 42.44 |
| VIT_10s0003g00270.t01 | Wine grape | nucleus | 25.18 | 41.66 |
| AT1G28420.1 | Thale cress | nucleus | 38.01 | 41.35 |
| Solyc02g077660.2.1 | Tomato | nucleus | 37.14 | 41.06 |
| Bra032908.1-P | Field mustard | nucleus | 36.55 | 40.79 |
| CDY34099 | Canola | nucleus | 36.5 | 40.66 |
| CDY65661 | Canola | nucleus | 36.23 | 40.19 |
| TraesCS3D01G114300.2 | Wheat | nucleus | 14.77 | 23.91 |
| TraesCS2D01G127700.1 | Wheat | vacuole | 14.23 | 23.78 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.7 | ncoils:Coil | InterPro:DDT_dom | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:HB1/Asxl_HTH | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom |
| InterPro:IPR001356 | InterPro:IPR018501 | PFAM:PF00046 | PFAM:PF02791 | PFAM:PF05066 | PFAM:PF15612 |
| PFAM:PF15613 | PFscan:PS50071 | PFscan:PS50827 | PANTHER:PTHR36968 | SMART:SM00389 | SMART:SM00571 |
| SUPFAM:SSF46689 | EnsemblPlantsGene:TraesCS3D01G245800 | EnsemblPlants:TraesCS3D01G245800.2 | InterPro:WHIM1_dom | InterPro:WHIM2_dom | TIGR:cd00086 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr3D:+:342101918..342115750
Molecular Weight (calculated)
207013.0 Da
IEP (calculated)
5.036
GRAVY (calculated)
-0.816
Length
1855 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDAAGAGDGP PREAPEERTP QTPAPPAVAA PASASGGAAG PSGSGEKPVK RMMKTPYQLD VLEQTYLAEQ YPSEAMRAEL SVKIGLSDRQ LQMWFCHRRL
0101: KDRKPPAKRQ RRDQEGPATP VPVPPPVLPL QAMPLASTDL MMSAGSPYDE PLLPLTHSRR GAGRSSAVPR ISAPDIGRDI GRRYYEPLPV MLPPPVAPMQ
0201: FRQAELRVIT SVESQLGEPL REDGPVLGVD FDPLPPGAFG APIVPEQQKQ PVRSYDAKIF SRHDPNLLKV SSFLPSMEHP FVPNSFAGKR KSMVGNPPPQ
0301: VHPHGGSRAV HEYQFLPEQP SDTYERASRS HYYDTPVEAS NSRIPSVTPG PHLLHVSEEM APGYAFEGQG LLPQPGRPQV FPAVSTDYEM NQSNSNINSV
0401: PVDGQFGSSH VAGFEDPLIS SETRAYHDED ASRVDRKRKH NEEAKIAKEV EAHEKRIRKE LEKQDILRRK REEQMRKEME RHDRERRKEE ERLLRERQRE
0501: EERFQREQRR EHERMEKFLQ KQSRRAEKQR QKEELRKEKE MARQKAANER ATARRIAREY MELVEDERLE LMELAAQSKG LPSMLCLDSD TLQQLDSFRG
0601: MLSQFPPETV RLKAPLSIKP WTGSEESVGK LLMVWKFLIT FADVLELSSV TLDEFIQSLH DYDSRLLGEL HVALLKSIIK DIEDVARTPS VALGVNPGGG
0701: HPQIVEGAYS WGFNIRNWQR HLNLLTWPEI LRQFALSAGF GPQLKKRNAE DVFYRDENEG QDGQNVISAL RNGSAAVRAA ALMKERGYTH RRSRHRLTPG
0801: TVKFAAFHVL SLEDSSGLTI LEVAEKIQKS GLRDLTTSKT PEASIAAALS RDTKLFERTA PSTYCVKSPY RKDPADSEAV LSAAREKIRA FQNVLSDSEA
0901: EKEVDDVDRD EESDCDDDPD GDDVNIEVGD EKDPLLAVKA QGVVPTATKV GDVKGDPDDL DAALTRPISS TTTSRKDIAM LSLGDSSAVG TSSVSPLRAS
1001: SDHPEVITGD AEDTQIDESN QGESWVQGLA EGDYCDLSVE ERLNALVALV GVATEGNSIR AVLEERLEAA NAIKKQMWAE AQLDKRRSKE EFASKVQYNS
1101: YTSLKADVIP ENNATETTPT PVRNLDIDND ENAGTSNNNE ILNQQSNAGN VSYERNGTGQ ETSATPDNLS VQQYAYADKT RSQLKSYIGH RAEQLYVYRS
1201: LPLGQDRRRN RYWQFSTSTS PNDPGSGRIF FESREGYWRV IDSEEVFDAL VASLDTRGSR EAQLHSMLQR VESTFKEGIK RKRDAAIEQS AGRYLKNGAT
1301: DTMRASYRSE FGSPSSTLSS VSADSATTYS DSFKIELGRN DVEKISISKR ADGFLKWMWS ECCDRQLTCA MKYGKKRCSA LMHSCNYCYQ IYLAEERHCS
1401: SCHKTFKSIY NYSEHMSQCE EKRRTDPNWK MQIADYSVPI GMRLLKLQLA TIEASIPSEA LQPFWSDGYR KSWGVKLYST TSVEEIFQML TLLEGAIRRD
1501: YLSSDFETSN ELLNNSKTED MPSQNPSSLP GTSVLPWVPD TTAAITLRML DLDYAVSYVQ NQKKERDGGD SMKLASRYTV VKKAQDIEPL EPTGFDLYDA
1601: RGPPSSGRRG RGRGSRGGSR GGRGRSRGGR IPRGISSSSR IEFMDEDAAY EKAPRKNARR GRGRGRGRGR GRRTVRPRQP SSEGRGRSIP KANLLGSFSM
1701: LSNVKPSAVE ESPRSSGAEE WGLESRRPYI QGEGDETSSG SESDQSEDNG ENGQPMDEEY EEEQVPDYSR AYSGGLRPHA LVMMDDETED DDEDAEADGE
1801: GDEEEYDVNH ASADVDDEMD EDDDIGDDGD DGGDGVEVNA DEDEGATSYS SEYSE
0101: KDRKPPAKRQ RRDQEGPATP VPVPPPVLPL QAMPLASTDL MMSAGSPYDE PLLPLTHSRR GAGRSSAVPR ISAPDIGRDI GRRYYEPLPV MLPPPVAPMQ
0201: FRQAELRVIT SVESQLGEPL REDGPVLGVD FDPLPPGAFG APIVPEQQKQ PVRSYDAKIF SRHDPNLLKV SSFLPSMEHP FVPNSFAGKR KSMVGNPPPQ
0301: VHPHGGSRAV HEYQFLPEQP SDTYERASRS HYYDTPVEAS NSRIPSVTPG PHLLHVSEEM APGYAFEGQG LLPQPGRPQV FPAVSTDYEM NQSNSNINSV
0401: PVDGQFGSSH VAGFEDPLIS SETRAYHDED ASRVDRKRKH NEEAKIAKEV EAHEKRIRKE LEKQDILRRK REEQMRKEME RHDRERRKEE ERLLRERQRE
0501: EERFQREQRR EHERMEKFLQ KQSRRAEKQR QKEELRKEKE MARQKAANER ATARRIAREY MELVEDERLE LMELAAQSKG LPSMLCLDSD TLQQLDSFRG
0601: MLSQFPPETV RLKAPLSIKP WTGSEESVGK LLMVWKFLIT FADVLELSSV TLDEFIQSLH DYDSRLLGEL HVALLKSIIK DIEDVARTPS VALGVNPGGG
0701: HPQIVEGAYS WGFNIRNWQR HLNLLTWPEI LRQFALSAGF GPQLKKRNAE DVFYRDENEG QDGQNVISAL RNGSAAVRAA ALMKERGYTH RRSRHRLTPG
0801: TVKFAAFHVL SLEDSSGLTI LEVAEKIQKS GLRDLTTSKT PEASIAAALS RDTKLFERTA PSTYCVKSPY RKDPADSEAV LSAAREKIRA FQNVLSDSEA
0901: EKEVDDVDRD EESDCDDDPD GDDVNIEVGD EKDPLLAVKA QGVVPTATKV GDVKGDPDDL DAALTRPISS TTTSRKDIAM LSLGDSSAVG TSSVSPLRAS
1001: SDHPEVITGD AEDTQIDESN QGESWVQGLA EGDYCDLSVE ERLNALVALV GVATEGNSIR AVLEERLEAA NAIKKQMWAE AQLDKRRSKE EFASKVQYNS
1101: YTSLKADVIP ENNATETTPT PVRNLDIDND ENAGTSNNNE ILNQQSNAGN VSYERNGTGQ ETSATPDNLS VQQYAYADKT RSQLKSYIGH RAEQLYVYRS
1201: LPLGQDRRRN RYWQFSTSTS PNDPGSGRIF FESREGYWRV IDSEEVFDAL VASLDTRGSR EAQLHSMLQR VESTFKEGIK RKRDAAIEQS AGRYLKNGAT
1301: DTMRASYRSE FGSPSSTLSS VSADSATTYS DSFKIELGRN DVEKISISKR ADGFLKWMWS ECCDRQLTCA MKYGKKRCSA LMHSCNYCYQ IYLAEERHCS
1401: SCHKTFKSIY NYSEHMSQCE EKRRTDPNWK MQIADYSVPI GMRLLKLQLA TIEASIPSEA LQPFWSDGYR KSWGVKLYST TSVEEIFQML TLLEGAIRRD
1501: YLSSDFETSN ELLNNSKTED MPSQNPSSLP GTSVLPWVPD TTAAITLRML DLDYAVSYVQ NQKKERDGGD SMKLASRYTV VKKAQDIEPL EPTGFDLYDA
1601: RGPPSSGRRG RGRGSRGGSR GGRGRSRGGR IPRGISSSSR IEFMDEDAAY EKAPRKNARR GRGRGRGRGR GRRTVRPRQP SSEGRGRSIP KANLLGSFSM
1701: LSNVKPSAVE ESPRSSGAEE WGLESRRPYI QGEGDETSSG SESDQSEDNG ENGQPMDEEY EEEQVPDYSR AYSGGLRPHA LVMMDDETED DDEDAEADGE
1801: GDEEEYDVNH ASADVDDEMD EDDDIGDDGD DGGDGVEVNA DEDEGATSYS SEYSE
0001: MEGGSEKTTP EGCGGESKSK RKMKTAAQLE VLENTYSAEP YPSEAIRADL SVKLNLSDRQ LQMWFCHRRL KERKSTTPSK RQRKELVTPT AMESWEPPVN
0101: AGDLVAGNEL DSRRAARGSG GSGVTVVRRF NEPSSAEVRA IGYVEAQLGE RLRDNGPVLG MEFDPLPPGA FGMPIEMPSH RKATRQAFET NIYVRSDVKP
0201: IKDHVRPIRE YQFIPELPSS RTDHSERVSP SHHFGVPLDG SVMRVSAVSA GHRDDYKISP QIPNLNLATH QGKPGHVYSP NLVEYDSPYQ KSYMDTAAQV
0301: HDDPFVKSER EVGNEDEDDD ALQLERHRKN EEARIAREVE AHEKRIRREL EKQDMLRRKR EEQIRKEMER QDRERRKEEE RLLREKQREE ERYLKEQMRE
0401: LQRREKFLKK ETIRAEKMRQ KEEMRKEKEV ARLKAANERA IARKIAKESM ELIEDERLEL MEVAALTKGL PSMLALDFET LQNLDEYRDK QAIFPPTSVK
0501: LKKPFAVKPW NGSDENVANL LMVWRFLITF ADVLGLWPFT LDEFAQAFHD YDPRLMGEIH IVLLKTIIKD IEGVVRTLST GVGANQNVAA NPGGGHPHVV
0601: EGAYAWGFDI RSWRKNLNVF TWPEILRQLA LSAGLGPQLK KMNIRTVSVH DDNEANNSEN VIFNLRKGVA AENAFAKMQE RGLSNPRRSR HRLTPGTVKF
0701: AAFHVLSLEG EKGLNILEVA EKIQKSGLRD LTTSRTPEAS VAAALSRDTK LFERVAPSTY CVRASYRKDA GDAETIFAEA RERIRAFKSG ITDVEDVDDA
0801: ERDEDSESDV GEDPEVDVNL KKEDPNPLKV ENLIGVEPLL ENGKLDTVPM KTELGLPLTP SLPEEMKDEK RDDTLADQSL EDAVANGEDS ACFDESKLGE
0901: QWVQGLVEGD YSNLSSEERL NALVALIGIA TEGNTIRIAL EERLEVASAL KKQMWGEVQL DKRWKEESLI RANYLSYPTA KPGLNIATPA SGNQESSSAD
1001: VTPISSQDPV SLPQIDVNNV IAGPSLQLQE NVPGVENLQY QQQQGYTADR ERLRAQLKAY VGYKAEELYV YRSLPLGQDR RRNRYWRFSA SASRNDPGCG
1101: RIFVELQDGR WRLIDSEEAF DYLVKSLDVR GVRESHLHFM LLKIEASFKE ALRRNVAANP GVCSISSSLD SDTAEISTTF KIELGDSNAV ERCSVLQRFH
1201: SFEKWMWDNM LHPSALSAFK YGAKQSSPLF RICRICAELH FVGDICCPSC GQMHAGPDVG ELCFAEQVAQ LGDNLRRGDT GFILRSSILS PLRIRLLKVQ
1301: LALVEASLPP EGLEAFWTEN LRKSWGMKLL SSSSHEDLYQ VLTTLEAALK RDFLSSNFET TSELLGLQEG ALASDLTCGV NVLPWIPKTA GGVALRLFDF
1401: DSSIVYTPDQ NNDPLKDKES EDFVGLETNI LRNLHEKDVM ETPVQVAAYK QEENWTDPGL GGVSSSGRGG RPPRGRGRPR ARGNGKKPAV SVKPPRGAAN
1501: SNGETMLRPR AQPRGGRKNG RRSGTKGRKR PTQGTLGICN EVGGGRRVKE VAVTAKTSLP DNDDDWIETP ELQDDDGEAS SSGRSFQYED YDDDDVMAPI
1601: DDFDGGGESS KLVGRGEFSL HSDDEYEEEE EEEEDMNMKM DVNVVDDEDE DYINEDSYGR KQHGISISND AATRKRFNKF EDPDLTSSSS SDFQ
0101: AGDLVAGNEL DSRRAARGSG GSGVTVVRRF NEPSSAEVRA IGYVEAQLGE RLRDNGPVLG MEFDPLPPGA FGMPIEMPSH RKATRQAFET NIYVRSDVKP
0201: IKDHVRPIRE YQFIPELPSS RTDHSERVSP SHHFGVPLDG SVMRVSAVSA GHRDDYKISP QIPNLNLATH QGKPGHVYSP NLVEYDSPYQ KSYMDTAAQV
0301: HDDPFVKSER EVGNEDEDDD ALQLERHRKN EEARIAREVE AHEKRIRREL EKQDMLRRKR EEQIRKEMER QDRERRKEEE RLLREKQREE ERYLKEQMRE
0401: LQRREKFLKK ETIRAEKMRQ KEEMRKEKEV ARLKAANERA IARKIAKESM ELIEDERLEL MEVAALTKGL PSMLALDFET LQNLDEYRDK QAIFPPTSVK
0501: LKKPFAVKPW NGSDENVANL LMVWRFLITF ADVLGLWPFT LDEFAQAFHD YDPRLMGEIH IVLLKTIIKD IEGVVRTLST GVGANQNVAA NPGGGHPHVV
0601: EGAYAWGFDI RSWRKNLNVF TWPEILRQLA LSAGLGPQLK KMNIRTVSVH DDNEANNSEN VIFNLRKGVA AENAFAKMQE RGLSNPRRSR HRLTPGTVKF
0701: AAFHVLSLEG EKGLNILEVA EKIQKSGLRD LTTSRTPEAS VAAALSRDTK LFERVAPSTY CVRASYRKDA GDAETIFAEA RERIRAFKSG ITDVEDVDDA
0801: ERDEDSESDV GEDPEVDVNL KKEDPNPLKV ENLIGVEPLL ENGKLDTVPM KTELGLPLTP SLPEEMKDEK RDDTLADQSL EDAVANGEDS ACFDESKLGE
0901: QWVQGLVEGD YSNLSSEERL NALVALIGIA TEGNTIRIAL EERLEVASAL KKQMWGEVQL DKRWKEESLI RANYLSYPTA KPGLNIATPA SGNQESSSAD
1001: VTPISSQDPV SLPQIDVNNV IAGPSLQLQE NVPGVENLQY QQQQGYTADR ERLRAQLKAY VGYKAEELYV YRSLPLGQDR RRNRYWRFSA SASRNDPGCG
1101: RIFVELQDGR WRLIDSEEAF DYLVKSLDVR GVRESHLHFM LLKIEASFKE ALRRNVAANP GVCSISSSLD SDTAEISTTF KIELGDSNAV ERCSVLQRFH
1201: SFEKWMWDNM LHPSALSAFK YGAKQSSPLF RICRICAELH FVGDICCPSC GQMHAGPDVG ELCFAEQVAQ LGDNLRRGDT GFILRSSILS PLRIRLLKVQ
1301: LALVEASLPP EGLEAFWTEN LRKSWGMKLL SSSSHEDLYQ VLTTLEAALK RDFLSSNFET TSELLGLQEG ALASDLTCGV NVLPWIPKTA GGVALRLFDF
1401: DSSIVYTPDQ NNDPLKDKES EDFVGLETNI LRNLHEKDVM ETPVQVAAYK QEENWTDPGL GGVSSSGRGG RPPRGRGRPR ARGNGKKPAV SVKPPRGAAN
1501: SNGETMLRPR AQPRGGRKNG RRSGTKGRKR PTQGTLGICN EVGGGRRVKE VAVTAKTSLP DNDDDWIETP ELQDDDGEAS SSGRSFQYED YDDDDVMAPI
1601: DDFDGGGESS KLVGRGEFSL HSDDEYEEEE EEEEDMNMKM DVNVVDDEDE DYINEDSYGR KQHGISISND AATRKRFNKF EDPDLTSSSS SDFQ
Arabidopsis Description
RLT2Homeobox-DDT domain protein RLT2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFH1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.