Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34099 | Canola | nucleus | 94.86 | 95.26 |
| CDY35748 | Canola | nucleus | 76.2 | 82.3 |
| CDX90154 | Canola | nucleus | 77.39 | 82.26 |
| AT1G28420.1 | Thale cress | nucleus | 78.71 | 77.18 |
| KRH21359 | Soybean | nucleus | 47.01 | 44.79 |
| KRH50116 | Soybean | nucleus | 46.89 | 44.0 |
| KRH20389 | Soybean | nucleus | 46.89 | 43.65 |
| Solyc02g077660.2.1 | Tomato | nucleus | 42.58 | 42.43 |
| Zm00001d043915_P002 | Maize | nucleus | 31.4 | 41.31 |
| Os05t0562400-01 | Rice | nucleus | 34.45 | 41.23 |
| CDY22305 | Canola | nucleus | 38.58 | 39.35 |
| CDX94760 | Canola | nucleus | 38.46 | 38.6 |
| VIT_10s0003g00270.t01 | Wine grape | nucleus | 25.84 | 38.54 |
| GSMUA_Achr9P06610_001 | Banana | nucleus | 40.85 | 38.52 |
| Zm00001d039002_P019 | Maize | nucleus, plastid | 41.15 | 37.55 |
| GSMUA_Achr8P27210_001 | Banana | nucleus | 42.34 | 37.09 |
| HORVU1Hr1G087180.1 | Barley | nucleus | 40.73 | 36.67 |
| KXG33081 | Sorghum | nucleus | 40.31 | 36.59 |
| TraesCS1D01G403700.1 | Wheat | nucleus | 40.49 | 36.56 |
| KXG33083 | Sorghum | nucleus | 39.77 | 36.48 |
| TraesCS1B01G424100.1 | Wheat | nucleus | 40.49 | 36.34 |
| HORVU3Hr1G061660.1 | Barley | nucleus | 40.01 | 36.28 |
| TraesCS3A01G245700.2 | Wheat | nucleus | 40.19 | 36.25 |
| TraesCS3D01G245800.2 | Wheat | nucleus | 40.19 | 36.23 |
| TraesCS3B01G273900.1 | Wheat | nucleus | 40.07 | 36.22 |
| Zm00001d009562_P007 | Maize | nucleus, plastid | 40.61 | 36.17 |
| TraesCS1A01G395600.1 | Wheat | nucleus | 40.13 | 36.09 |
| Zm00001d011560_P012 | Maize | nucleus | 39.17 | 35.2 |
| GSMUA_Achr6P26980_001 | Banana | nucleus | 41.45 | 30.88 |
| CDX89461 | Canola | cytosol, endoplasmic reticulum | 7.48 | 25.93 |
| Zm00001d043914_P001 | Maize | nucleus | 8.07 | 23.98 |
| OQU75646 | Sorghum | cytosol | 8.01 | 23.22 |
| CDY51255 | Canola | nucleus | 14.35 | 22.99 |
| CDY60841 | Canola | nucleus | 14.17 | 22.74 |
| CDY22114 | Canola | nucleus | 6.1 | 21.47 |
| CDY21949 | Canola | nucleus | 5.86 | 20.46 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.7 | GO:A0A078JIR0 | UniProt:A0A078JIR0 | EnsemblPlants:CDY65661 | ProteinID:CDY65661 |
| ProteinID:CDY65661.1 | ncoils:Coil | InterPro:DDT_dom | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:GSBRNA2T00047945001 | InterPro:HB1/Asxl_HTH | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR018501 |
| PFAM:PF00046 | PFAM:PF02791 | PFAM:PF05066 | PFAM:PF15612 | PFAM:PF15613 | PFscan:PS50071 |
| PFscan:PS50827 | PANTHER:PTHR36968 | PANTHER:PTHR36968:SF6 | SMART:SM00389 | SMART:SM00571 | SUPFAM:SSF46689 |
| UniParc:UPI0004EE328B | InterPro:WHIM1_dom | InterPro:WHIM2_dom | SEG:seg | : | : |
Description
BnaC05g51140DBnaC05g51140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JIR0]
Coordinates
chrLK034882:-:164..7608
Molecular Weight (calculated)
187653.0 Da
IEP (calculated)
5.186
GRAVY (calculated)
-0.787
Length
1672 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEMGSDGEED QIRSVADSNH KNKKMKKVVD ASNSKDSPSS KPKRQMKTPF QLQTLEQVYA AEETYPSEAT RAELSEKLDL SDRQLQMWFC HRRLKDKKDG
0101: QVKKTPKPSP VQPASAVPAL YLPAAELDSG SDSGSGRSPY SDPRREFASG SSNSPAEYET MGSAGYEPPR SSVMVRRAVA CIEAQLGEPL RDDGPILGME
0201: FDPLPPGAFG TPIAMQTHQG HPYESKMYEP HDVRPRRSQA ATSSFHDQQS LNDPSSFTPD MYGRYSESHA RGVDYEISRP RSSSFMQGNG PLPKSYGNSS
0301: RNCSTSQQDM PSPILPSARG DSFLLERDSS GLRAEDPYLL SDGVRMSNDV HRKGKINDGR LGRGSGQKDL EKLELQRKRN EERMRKEMER YERERRKEEE
0401: RLMRERIKEE ERLQREQRRE MERRERFLQR ENERAEKNKQ KEEIRREKEA IRRKIAVEKA TARRIAKEAM DLIEDEQLEL MDLAASSKGL SSVIQLDHET
0501: LQNLDLYRDS LSTFPPKALQ LKMPFTISPW KDSEENVGNL LMVWRFLISF SDVLDLWPFT LDEFIQALHD YDSRLLGEIH ITLLRSIIRD IEDVARTPYS
0601: GIGNNQYTTA NPEGGHPQIV EGAYAWGFDI RSWKKHLNPL TWPEILRQLG LSSGFGPRLK KNNSRVTHTG EKDELQAKGC EDIISTLRSG SAAESAFASM
0701: LEKGLLAPRK SRHRLTPGTV KFAAFHVLSL EGSKGLTVIE LADKIQKSGL RDLRTSKTPE ASISVALTRD VKLFERIAPS TYCVRAPYVK DPADGEAILS
0801: EARKKIKAFE NGLAGPEDVN DLEKDEDFEC DIDEDPEVDD LATLPSASKS ADLGEANGLS GKGGEIMFSD VKANVKSEVE KEVSSPPTSS MKTIVPQCHS
0901: EQGKDAAVSC MDNKNAVVED IKQGKSWVLG LTEGDYCHLS VKERLEALVA LVGIANEGNS IRANLEDRLE AANSLKKQMW AEAQLDNSCM RDVLKFDIQH
1001: STREIDGFNR DPSQLVDETK PPLEVVSNDV HKLSTERGSV NQEGNISQEN CSSKRSRSQL KSYISHKAEE VYPYRSLPLG QDRRHNRYWH FAASASKSDP
1101: CSGLIFVELH DSKWRLIDSA EAFDTLVASL DMRGVRESHL RIMLQKIEGA FKENACKKIN LVRNPSLKED SVSPFSAILG SSSDSMGVST SVRVELGRRN
1201: DKEKENLLKR FHSFQRWMWT ETYSSVPSCA RKDGKKRCEL LATCEVCVAS YLSEYTHCTS CHQRLDMADS SERKIADSGL TASPLPFGVR LLKALLVFLE
1301: ASVPDEAYES FWTEEKRKNW GFRLNASSSP EEFLQVLTYL ESAIKKESLS SNFLSAKELL GAAGATADPG SVDVFLWIPK TVSAVALRLS DLDASIVYVK
1401: PEKPEPVPED EKEQISLFPG NSLLKGKGPK EQEDQDEVVP NSGKKSSKRR VIFGSGSNKK AKKKKVQGGN GRFVAGRSNV AVNRNIMSVE LNHQVPGRGK
1501: RTVRKRPERN DEDNYRLVSR MADIVKPTSE EDEEEQTFRG IDQDWAGETP GEMDEEWASE TPNRVMTPMQ VDGESDDNSV GVQSEDDDDE GQFVSYSQRN
1601: KWGFDWNSNP NEAMEDVEEE EVAGVEQVQR EYVAEMSESS EDEEDDDLPA PSNNAAANNY DRESEDYSSS DS
0101: QVKKTPKPSP VQPASAVPAL YLPAAELDSG SDSGSGRSPY SDPRREFASG SSNSPAEYET MGSAGYEPPR SSVMVRRAVA CIEAQLGEPL RDDGPILGME
0201: FDPLPPGAFG TPIAMQTHQG HPYESKMYEP HDVRPRRSQA ATSSFHDQQS LNDPSSFTPD MYGRYSESHA RGVDYEISRP RSSSFMQGNG PLPKSYGNSS
0301: RNCSTSQQDM PSPILPSARG DSFLLERDSS GLRAEDPYLL SDGVRMSNDV HRKGKINDGR LGRGSGQKDL EKLELQRKRN EERMRKEMER YERERRKEEE
0401: RLMRERIKEE ERLQREQRRE MERRERFLQR ENERAEKNKQ KEEIRREKEA IRRKIAVEKA TARRIAKEAM DLIEDEQLEL MDLAASSKGL SSVIQLDHET
0501: LQNLDLYRDS LSTFPPKALQ LKMPFTISPW KDSEENVGNL LMVWRFLISF SDVLDLWPFT LDEFIQALHD YDSRLLGEIH ITLLRSIIRD IEDVARTPYS
0601: GIGNNQYTTA NPEGGHPQIV EGAYAWGFDI RSWKKHLNPL TWPEILRQLG LSSGFGPRLK KNNSRVTHTG EKDELQAKGC EDIISTLRSG SAAESAFASM
0701: LEKGLLAPRK SRHRLTPGTV KFAAFHVLSL EGSKGLTVIE LADKIQKSGL RDLRTSKTPE ASISVALTRD VKLFERIAPS TYCVRAPYVK DPADGEAILS
0801: EARKKIKAFE NGLAGPEDVN DLEKDEDFEC DIDEDPEVDD LATLPSASKS ADLGEANGLS GKGGEIMFSD VKANVKSEVE KEVSSPPTSS MKTIVPQCHS
0901: EQGKDAAVSC MDNKNAVVED IKQGKSWVLG LTEGDYCHLS VKERLEALVA LVGIANEGNS IRANLEDRLE AANSLKKQMW AEAQLDNSCM RDVLKFDIQH
1001: STREIDGFNR DPSQLVDETK PPLEVVSNDV HKLSTERGSV NQEGNISQEN CSSKRSRSQL KSYISHKAEE VYPYRSLPLG QDRRHNRYWH FAASASKSDP
1101: CSGLIFVELH DSKWRLIDSA EAFDTLVASL DMRGVRESHL RIMLQKIEGA FKENACKKIN LVRNPSLKED SVSPFSAILG SSSDSMGVST SVRVELGRRN
1201: DKEKENLLKR FHSFQRWMWT ETYSSVPSCA RKDGKKRCEL LATCEVCVAS YLSEYTHCTS CHQRLDMADS SERKIADSGL TASPLPFGVR LLKALLVFLE
1301: ASVPDEAYES FWTEEKRKNW GFRLNASSSP EEFLQVLTYL ESAIKKESLS SNFLSAKELL GAAGATADPG SVDVFLWIPK TVSAVALRLS DLDASIVYVK
1401: PEKPEPVPED EKEQISLFPG NSLLKGKGPK EQEDQDEVVP NSGKKSSKRR VIFGSGSNKK AKKKKVQGGN GRFVAGRSNV AVNRNIMSVE LNHQVPGRGK
1501: RTVRKRPERN DEDNYRLVSR MADIVKPTSE EDEEEQTFRG IDQDWAGETP GEMDEEWASE TPNRVMTPMQ VDGESDDNSV GVQSEDDDDE GQFVSYSQRN
1601: KWGFDWNSNP NEAMEDVEEE EVAGVEQVQR EYVAEMSESS EDEEDDDLPA PSNNAAANNY DRESEDYSSS DS
0001: MEMGSDGEDQ KIRSVVGDAN LNNKKKKIDN NSSSKDGRVK PKRQMKTPFQ LETLEKVYSE EKYPSEATRA ELSEKLDLSD RQLQMWFCHR RLKDKKDGQS
0101: NKPVKSSVAA VQSASVNELP AAAGSVPEQD SRSDSGSESG CSPYSNSRRN FASGSSSSRA ELDEYETMGK PSYESRLSTM VHRAIVCIEA QLGEPLRDDG
0201: PILGMEFDPL PPGAFGTPIA MQKHLLHPYE SDLYERHDPR PRRSHAAARS FHEQQSLDDP SSFTPNMYER YSENHARGMD YEVARSRISS FMHANGPVPR
0301: SYVTPGHASR NCSTSQQDMP SPIESAHHGD RFLLEKDSSV LGTEDPYLLP DGVRKSSDVH RKGKINDGRL GRGSETRENH GPKDLEKLEI QRKKNEERMR
0401: KEMERNERER RKEEERLMRE RIKEEERLQR EQRREVERRE KFLQRENERA EKKKQKDEIR REKDAIRRKL AIEKATARRI AKESMDLIED EQLELMELAA
0501: ISKGLPSVLQ LDHDTLQNLE VYRDSLSTFP PKSLQLKMPF AISPWKDSDE TVGNLLMVWR FLISFSDVLD LWPFTLDEFI QAFHDYDSRL LGEIHVTLLR
0601: SIIRDVEDVA RTPFSGIGNN QYTTANPEGG HPQIVEGAYA WGFDIRSWKK HLNPLTWPEI LRQLALSAGF GPKLKKKHSR LTNTGDKDEA KGCEDVISTI
0701: RNGTAAESAF ASMREKGLLA PRKSRHRLTP GTVKFAAFHV LSLEGSKGLT VLELADKIQK SGLRDLTTSK TPEASISVAL TRDVKLFERI APSTYCVRAP
0801: YVKDPKDGEA ILADARKKIR AFENGFTGPE DVNDLERDED FEIDIDEDPE VDDLATLASA SKSAVLGEAN VLSGKGVDTM FCDVKADVKS ELEKEFSSPP
0901: PSTMKSIVPQ HSERHKNTVV GGVDAVIDES NQGQSWIQGL TEGDYCHLSV EERLNALVAL VGIANEGNSI RTGLEDRMEA ANALKKQMWA EAQLDNSCMR
1001: DVLKLDLQNL ASSKTESTIG LPIIQSSTRE RDSFDRDPSQ LLDETKPLED LSNDLHKSSA ERALINQDAN ISQENYASKR SRSQLKSYIG HKAEEVYPYR
1101: SLPLGQDRRH NRYWHFAVSV SKSDPCSRLL FVELHDGKWL LIDSEEAFDI LVASLDMRGI RESHLRIMLQ KIEGSFKENA CKDIKLARNP FLTEKSVVNH
1201: SPTDSVSPSS SAISGSNSDS METSTSIRVD LGRNDTENKN LSKRFHDFQR WMWTETYSSL PSCARKYGKK RSELLATCDA CVASYLSEYT FCSSCHQRLD
1301: VVDSSEILDS GLAVSPLPFG VRLLKPLLVF LEASVPDEAL ESFWTEDQRK KWGFRLNTSS SPGELLQVLT SLESAIKKES LSSNFMSAKE LLGAANAEAD
1401: DQGSVDVLPW IPKTVSAVAL RLSELDASII YVKPEKPEVI PEDENEQISL FPRDSPFKGK GPREQEDQDE VAPNPGNRNK KRARVSLGSG SNRKVKRKKA
1501: QSGLNKFVVG RRNVAVNSNL MAVELNHQVP GKGKRTVRKR PERIDEDNSH LVNRMANIVR PKSEEVEEDE EEEEQTFRDI NEDWAAGETP REMEEDWANE
1601: TPNRMMTPMQ VDDESDNSVG VESEDEDGGG QFVDYSQRNK WGLDWNSNLN VAIEEDEEEE VVGVGRVEGE DDAEMSESSE DDDVPANNAA NNYDRESEGY
1701: SSSDS
0101: NKPVKSSVAA VQSASVNELP AAAGSVPEQD SRSDSGSESG CSPYSNSRRN FASGSSSSRA ELDEYETMGK PSYESRLSTM VHRAIVCIEA QLGEPLRDDG
0201: PILGMEFDPL PPGAFGTPIA MQKHLLHPYE SDLYERHDPR PRRSHAAARS FHEQQSLDDP SSFTPNMYER YSENHARGMD YEVARSRISS FMHANGPVPR
0301: SYVTPGHASR NCSTSQQDMP SPIESAHHGD RFLLEKDSSV LGTEDPYLLP DGVRKSSDVH RKGKINDGRL GRGSETRENH GPKDLEKLEI QRKKNEERMR
0401: KEMERNERER RKEEERLMRE RIKEEERLQR EQRREVERRE KFLQRENERA EKKKQKDEIR REKDAIRRKL AIEKATARRI AKESMDLIED EQLELMELAA
0501: ISKGLPSVLQ LDHDTLQNLE VYRDSLSTFP PKSLQLKMPF AISPWKDSDE TVGNLLMVWR FLISFSDVLD LWPFTLDEFI QAFHDYDSRL LGEIHVTLLR
0601: SIIRDVEDVA RTPFSGIGNN QYTTANPEGG HPQIVEGAYA WGFDIRSWKK HLNPLTWPEI LRQLALSAGF GPKLKKKHSR LTNTGDKDEA KGCEDVISTI
0701: RNGTAAESAF ASMREKGLLA PRKSRHRLTP GTVKFAAFHV LSLEGSKGLT VLELADKIQK SGLRDLTTSK TPEASISVAL TRDVKLFERI APSTYCVRAP
0801: YVKDPKDGEA ILADARKKIR AFENGFTGPE DVNDLERDED FEIDIDEDPE VDDLATLASA SKSAVLGEAN VLSGKGVDTM FCDVKADVKS ELEKEFSSPP
0901: PSTMKSIVPQ HSERHKNTVV GGVDAVIDES NQGQSWIQGL TEGDYCHLSV EERLNALVAL VGIANEGNSI RTGLEDRMEA ANALKKQMWA EAQLDNSCMR
1001: DVLKLDLQNL ASSKTESTIG LPIIQSSTRE RDSFDRDPSQ LLDETKPLED LSNDLHKSSA ERALINQDAN ISQENYASKR SRSQLKSYIG HKAEEVYPYR
1101: SLPLGQDRRH NRYWHFAVSV SKSDPCSRLL FVELHDGKWL LIDSEEAFDI LVASLDMRGI RESHLRIMLQ KIEGSFKENA CKDIKLARNP FLTEKSVVNH
1201: SPTDSVSPSS SAISGSNSDS METSTSIRVD LGRNDTENKN LSKRFHDFQR WMWTETYSSL PSCARKYGKK RSELLATCDA CVASYLSEYT FCSSCHQRLD
1301: VVDSSEILDS GLAVSPLPFG VRLLKPLLVF LEASVPDEAL ESFWTEDQRK KWGFRLNTSS SPGELLQVLT SLESAIKKES LSSNFMSAKE LLGAANAEAD
1401: DQGSVDVLPW IPKTVSAVAL RLSELDASII YVKPEKPEVI PEDENEQISL FPRDSPFKGK GPREQEDQDE VAPNPGNRNK KRARVSLGSG SNRKVKRKKA
1501: QSGLNKFVVG RRNVAVNSNL MAVELNHQVP GKGKRTVRKR PERIDEDNSH LVNRMANIVR PKSEEVEEDE EEEEQTFRDI NEDWAAGETP REMEEDWANE
1601: TPNRMMTPMQ VDDESDNSVG VESEDEDGGG QFVDYSQRNK WGLDWNSNLN VAIEEDEEEE VVGVGRVEGE DDAEMSESSE DDDVPANNAA NNYDRESEGY
1701: SSSDS
Arabidopsis Description
RLT1Homeobox-DDT domain protein RLT1 [Source:UniProtKB/Swiss-Prot;Acc:F4HY56]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.