Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51255 | Canola | nucleus | 89.16 | 88.98 |
| Bra014277.1-P | Field mustard | nucleus | 87.04 | 88.92 |
| CDX89461 | Canola | cytosol, endoplasmic reticulum | 39.64 | 85.68 |
| AT4G12750.1 | Thale cress | nucleus | 58.25 | 54.34 |
| PGSC0003DMT400002603 | Potato | cytosol | 38.1 | 46.22 |
| GSMUA_Achr9P24830_001 | Banana | cytosol, nucleus, plasma membrane | 33.88 | 43.47 |
| VIT_07s0005g06050.t01 | Wine grape | extracellular | 10.84 | 42.64 |
| KRH41406 | Soybean | nucleus | 44.15 | 42.55 |
| KRH60120 | Soybean | nucleus | 43.86 | 42.24 |
| Solyc11g006200.1.1 | Tomato | nucleus | 40.59 | 39.17 |
| HORVU3Hr1G020400.11 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 27.93 | 38.9 |
| VIT_19s0085g00350.t01 | Wine grape | nucleus | 44.24 | 38.9 |
| TraesCS3A01G112300.2 | Wheat | nucleus | 36.76 | 35.23 |
| TraesCS2A01G124800.1 | Wheat | nucleus | 36.66 | 35.05 |
| TraesCS2B01G147300.4 | Wheat | nucleus | 36.47 | 34.8 |
| TraesCS2D01G127700.1 | Wheat | vacuole | 36.66 | 34.41 |
| TraesCS3B01G131700.9 | Wheat | nucleus | 36.37 | 34.39 |
| TraesCS3D01G114300.2 | Wheat | nucleus | 37.62 | 34.21 |
| EER90701 | Sorghum | nucleus | 37.43 | 34.0 |
| Zm00001d034515_P002 | Maize | nucleus | 37.14 | 32.85 |
| HORVU2Hr1G021950.4 | Barley | nucleus, plastid | 36.28 | 31.82 |
| GSMUA_Achr6P22010_001 | Banana | nucleus | 30.04 | 30.21 |
| CDY35748 | Canola | nucleus | 23.13 | 15.57 |
| CDX90154 | Canola | nucleus | 23.22 | 15.38 |
| CDY22305 | Canola | nucleus | 23.22 | 14.77 |
| CDY34099 | Canola | nucleus | 23.13 | 14.47 |
| CDX94760 | Canola | nucleus | 22.94 | 14.35 |
| CDY65661 | Canola | nucleus | 22.74 | 14.17 |
| CDY22114 | Canola | nucleus | 5.47 | 12.0 |
| CDY21949 | Canola | nucleus | 4.99 | 10.86 |
Protein Annotations
| EnsemblPlants:CDY60841 | EnsemblPlantsGene:GSBRNA2T00030122001 | InterPro:DDT_dom | InterPro:IPR018501 | InterPro:WHIM1_dom | InterPro:WHIM2_dom |
| ncoils:Coil | PANTHER:PTHR10390 | PANTHER:PTHR10390:SF44 | PFAM:PF02791 | PFAM:PF15612 | PFAM:PF15613 |
| PFscan:PS50827 | ProteinID:CDY60841 | ProteinID:CDY60841.1 | SEG:seg | SMART:SM00571 | UniParc:UPI0004EE6E85 |
| UniProt:A0A078JAD7 | MapMan:35.1 | : | : | : | : |
Description
BnaA08g29500DBnaA08g29500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JAD7]
Coordinates
chrLK033920:-:6542..11329
Molecular Weight (calculated)
117615.0 Da
IEP (calculated)
7.350
GRAVY (calculated)
-0.392
Length
1042 amino acids
Sequence
(BLAST)
(BLAST)
0001: MHPNPGEMDE RRKKSSVAAA VRAKIPQPRG SALRKINCQK LLTSQYILAK VFRKDGPSLG FQFDHLPPSS SSLDQQRVGR KRKVSEQHTS QDDCVVVKKK
0101: QYGIGKGLMT AWRVMNPNSH ERATLAQSNP KKTKTQLASI LKQKQKKKKS MEKKRTSINT ETTEELNKDE TVGFSEKCEL GEVFKETCQT ISILVDDEEL
0201: ERQEGLVNPP LTCSCHTATC GSCFLCKDLL PKFPPSSVGM RLPFALHPWN SSPESVKKLF KVVHFLYTYS VTLDICPFTI DEFTRAFHDK DSLLLGKIHL
0301: SLLKLLLVDV ETELQRGSFS TLSISCKFLA LLQSVESQIR ILDMWKDSLN SLTWAEILRQ ILVAAGFGSV KRAAGQSEEL SKHALFILED GLVACGILKE
0401: RRLMKKYGLR LGTLKGELFR MLNEQGGKNG LKISELANAA VEVAGLNLAT ASEEERERSI CSTLASDITL FEKISESTYR ARVNCFSEDH ESDSGESGSV
0501: DDDESGDELG RVSESFVFRK AKCRKRRKQV LEVCSEIDES HPGEAWLLGL MEGEYSDLSI EEKLDVFIAL IDLLSSGSTI RMEDLPRAMV DCAPSIYSHG
0601: SGGKIKRASS SNHPRVSWVH GGERIEKLSK PSDSHPVDSS SIVGADFAKL AGDNVHPMQS VYLGSDRRFN RYWLFLGPCN ANDPGHRCVY FESSEDGHWE
0701: VISHKEALRA LLSVLDDRGR REARLIESLE KRESFLCQAM LRRIDHVVRE DSSSSPVSDI DNNNLCLNEI ANDQQAAIVF EKRGNSLLWS LVQEFDEWIW
0801: DKYYLNLNVV KHSRRSYLDS LTRCKSCHDL YWRDEKHCKI CHATFELDID LEERYAIHEA TCSRKNEESS DSFPDHKVLS SQLQSLKAAV YAIESAMPED
0901: ALIGAWKKSA HRLWAKRLRR SSTLSEITQV IGDFVGAINE DWLWHFGEEE EGEIITSFPS MPRTTSAIAL WLVKLDTLIA SYVVEKAPQP EGNQLNRTRK
1001: YKYELTSLSS SSVSVLKCFL SIARFLFHLR PTTTSRFHIL VI
0101: QYGIGKGLMT AWRVMNPNSH ERATLAQSNP KKTKTQLASI LKQKQKKKKS MEKKRTSINT ETTEELNKDE TVGFSEKCEL GEVFKETCQT ISILVDDEEL
0201: ERQEGLVNPP LTCSCHTATC GSCFLCKDLL PKFPPSSVGM RLPFALHPWN SSPESVKKLF KVVHFLYTYS VTLDICPFTI DEFTRAFHDK DSLLLGKIHL
0301: SLLKLLLVDV ETELQRGSFS TLSISCKFLA LLQSVESQIR ILDMWKDSLN SLTWAEILRQ ILVAAGFGSV KRAAGQSEEL SKHALFILED GLVACGILKE
0401: RRLMKKYGLR LGTLKGELFR MLNEQGGKNG LKISELANAA VEVAGLNLAT ASEEERERSI CSTLASDITL FEKISESTYR ARVNCFSEDH ESDSGESGSV
0501: DDDESGDELG RVSESFVFRK AKCRKRRKQV LEVCSEIDES HPGEAWLLGL MEGEYSDLSI EEKLDVFIAL IDLLSSGSTI RMEDLPRAMV DCAPSIYSHG
0601: SGGKIKRASS SNHPRVSWVH GGERIEKLSK PSDSHPVDSS SIVGADFAKL AGDNVHPMQS VYLGSDRRFN RYWLFLGPCN ANDPGHRCVY FESSEDGHWE
0701: VISHKEALRA LLSVLDDRGR REARLIESLE KRESFLCQAM LRRIDHVVRE DSSSSPVSDI DNNNLCLNEI ANDQQAAIVF EKRGNSLLWS LVQEFDEWIW
0801: DKYYLNLNVV KHSRRSYLDS LTRCKSCHDL YWRDEKHCKI CHATFELDID LEERYAIHEA TCSRKNEESS DSFPDHKVLS SQLQSLKAAV YAIESAMPED
0901: ALIGAWKKSA HRLWAKRLRR SSTLSEITQV IGDFVGAINE DWLWHFGEEE EGEIITSFPS MPRTTSAIAL WLVKLDTLIA SYVVEKAPQP EGNQLNRTRK
1001: YKYELTSLSS SSVSVLKCFL SIARFLFHLR PTTTSRFHIL VI
0001: MKRKSPLQVQ ALEGFYLEQM YPTPKEMEDL GKSLGLTLKE VRGWFKRRRS RGKGVKSMAN DGLGAKNPQL YDRSLMRSST SSRCVGVAVE ERCIVGTRKA
0101: SCQNLLPSSH ILAKVFRKDG PSLGSEFDHL PSGARKASWL GTSSVGQQKQ KVARKRKISE LMDHTSQDCI QENATVMKHG IGKGLMTVWR VMNPNRRDVS
0201: PCVDLLDERA TLPQSSARNP PHQKKKQRQL ASILKQKLLQ KRSTEKKRRS IHREAELNKD ETQREFKENC ELAADGEVFK ETCQTISTLV DDEELEMRER
0301: HERGNPLTCS CHHPSSGSHG CFLCKDLLPK FPPNSVQMRM PFGLHPWNSS PESVKKLFKV VHFLYTYSVT LDIGPFTLDE FTRAFHDKDS LLLGKIHLSL
0401: LKLLLLDVET ELERGSFSNL SISCKFLALL QSVESQILIL DMWRNSLNSL TWTELLRQIL VAAGYGSLKC AVQSEELSKE RKLMKKYGLR LGTLKGELFR
0501: MLNGQGNNGL KISELADAPE VAVLNLATVP EERENSICST LASDITLFEK ISESTYRVRV NCFSEDPDKS QSDSDDSGSV DDESDDCSIS SGDEIEHVSE
0601: NPALRKVKCR KRRKHKSKMR EVCSEIDESH PGEPWLLGLM EGEYSDLSVE EKLDVFVALI DLLSSGSTIR MEDLPRAVAD CAPSIYSHGS GGKIKRSSSN
0701: QYSYPRGSWV HGGELYGIKA LSKSSDSHPV DSSSIVGAFA KLAGNRANNV HPMQSVYLGS DRRFNRYWLF LGTCNANDPG HRCVFFESSE DGHWEVINNK
0801: EALRALLSVL DDRGRREARL IESLEKRESF LCQAMLSRQV TQSETAHFTD IVREDSSSPV SDIDNNLCLN EIANDQFSSQ HAAIVFEIGS KREKSLLWSL
0901: IQEFDDWIWA NFNFNLNSVK HRRRSYLDSL TRCKSCHDLY WRDEKHCKIC HATFEVDIDL EERYAIHAAT CMRKEECDTF PDHKVLSSQL QSLKAAVYAI
1001: ESAMPEDALI GAWRKSAHRL WAKRLRRSSS VSEITQVIGD FVGAINEEWL WHCSDQGQTL MGEIINCFPS MPQTTSAIAL WLVKLDTLIA PYVEKAPPER
1101: DQPLCRTRNT SRRASKR
0101: SCQNLLPSSH ILAKVFRKDG PSLGSEFDHL PSGARKASWL GTSSVGQQKQ KVARKRKISE LMDHTSQDCI QENATVMKHG IGKGLMTVWR VMNPNRRDVS
0201: PCVDLLDERA TLPQSSARNP PHQKKKQRQL ASILKQKLLQ KRSTEKKRRS IHREAELNKD ETQREFKENC ELAADGEVFK ETCQTISTLV DDEELEMRER
0301: HERGNPLTCS CHHPSSGSHG CFLCKDLLPK FPPNSVQMRM PFGLHPWNSS PESVKKLFKV VHFLYTYSVT LDIGPFTLDE FTRAFHDKDS LLLGKIHLSL
0401: LKLLLLDVET ELERGSFSNL SISCKFLALL QSVESQILIL DMWRNSLNSL TWTELLRQIL VAAGYGSLKC AVQSEELSKE RKLMKKYGLR LGTLKGELFR
0501: MLNGQGNNGL KISELADAPE VAVLNLATVP EERENSICST LASDITLFEK ISESTYRVRV NCFSEDPDKS QSDSDDSGSV DDESDDCSIS SGDEIEHVSE
0601: NPALRKVKCR KRRKHKSKMR EVCSEIDESH PGEPWLLGLM EGEYSDLSVE EKLDVFVALI DLLSSGSTIR MEDLPRAVAD CAPSIYSHGS GGKIKRSSSN
0701: QYSYPRGSWV HGGELYGIKA LSKSSDSHPV DSSSIVGAFA KLAGNRANNV HPMQSVYLGS DRRFNRYWLF LGTCNANDPG HRCVFFESSE DGHWEVINNK
0801: EALRALLSVL DDRGRREARL IESLEKRESF LCQAMLSRQV TQSETAHFTD IVREDSSSPV SDIDNNLCLN EIANDQFSSQ HAAIVFEIGS KREKSLLWSL
0901: IQEFDDWIWA NFNFNLNSVK HRRRSYLDSL TRCKSCHDLY WRDEKHCKIC HATFEVDIDL EERYAIHAAT CMRKEECDTF PDHKVLSSQL QSLKAAVYAI
1001: ESAMPEDALI GAWRKSAHRL WAKRLRRSSS VSEITQVIGD FVGAINEEWL WHCSDQGQTL MGEIINCFPS MPQTTSAIAL WLVKLDTLIA PYVEKAPPER
1101: DQPLCRTRNT SRRASKR
Arabidopsis Description
Homeodomain-like transcriptional regulator [Source:TAIR;Acc:AT4G12750]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.