Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033725.1-P | Field mustard | nucleus | 98.96 | 98.9 |
| CDX94760 | Canola | nucleus | 95.79 | 94.24 |
| AT5G44180.1 | Thale cress | nucleus | 81.39 | 78.75 |
| VIT_12s0028g03090.t01 | Wine grape | nucleus | 44.05 | 47.38 |
| Zm00001d043915_P002 | Maize | nucleus | 34.9 | 45.0 |
| Solyc07g053610.2.1 | Tomato | nucleus | 46.0 | 42.31 |
| KRH55891 | Soybean | nucleus | 44.6 | 41.04 |
| Os05t0562400-01 | Rice | nucleus | 34.66 | 40.66 |
| CDY35748 | Canola | nucleus | 38.19 | 40.44 |
| GSMUA_Achr9P06610_001 | Banana | nucleus | 43.38 | 40.1 |
| CDX90154 | Canola | nucleus | 38.13 | 39.73 |
| KXG33081 | Sorghum | nucleus | 43.69 | 38.87 |
| CDY34099 | Canola | nucleus | 39.48 | 38.86 |
| KXG33083 | Sorghum | nucleus | 43.14 | 38.78 |
| GSMUA_Achr8P27210_001 | Banana | nucleus | 45.03 | 38.66 |
| CDY65661 | Canola | nucleus | 39.35 | 38.58 |
| HORVU3Hr1G061660.1 | Barley | nucleus | 43.38 | 38.56 |
| TraesCS3A01G245700.2 | Wheat | nucleus | 43.38 | 38.35 |
| TraesCS3D01G245800.2 | Wheat | nucleus | 43.2 | 38.17 |
| TraesCS3B01G273900.1 | Wheat | nucleus | 42.89 | 38.0 |
| Zm00001d039002_P019 | Maize | nucleus, plastid | 42.4 | 37.94 |
| Zm00001d011560_P012 | Maize | nucleus | 43.01 | 37.88 |
| TraesCS1D01G403700.1 | Wheat | nucleus | 42.22 | 37.37 |
| TraesCS1A01G395600.1 | Wheat | nucleus | 42.22 | 37.22 |
| TraesCS1B01G424100.1 | Wheat | nucleus | 42.04 | 36.98 |
| HORVU1Hr1G087180.1 | Barley | nucleus | 41.85 | 36.94 |
| Zm00001d009562_P007 | Maize | nucleus, plastid | 41.43 | 36.17 |
| GSMUA_Achr6P26980_001 | Banana | nucleus | 44.23 | 32.31 |
| CDX89461 | Canola | cytosol, endoplasmic reticulum | 7.14 | 24.27 |
| Zm00001d043914_P001 | Maize | nucleus | 8.05 | 23.45 |
| CDY60841 | Canola | nucleus | 14.77 | 23.22 |
| CDY51255 | Canola | nucleus | 14.7 | 23.08 |
| OQU75646 | Sorghum | cytosol | 7.99 | 22.7 |
| CDY22114 | Canola | nucleus | 5.43 | 18.74 |
| CDY21949 | Canola | nucleus | 5.37 | 18.37 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.7 | GO:A0A078G748 | UniProt:A0A078G748 | EnsemblPlants:CDY22305 | ProteinID:CDY22305 |
| ProteinID:CDY22305.1 | ncoils:Coil | InterPro:DDT_dom | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:GSBRNA2T00018772001 | InterPro:HB1/Asxl_HTH | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR018501 |
| PFAM:PF00046 | PFAM:PF02791 | PFAM:PF05066 | PFAM:PF15612 | PFAM:PF15613 | PFscan:PS50071 |
| PFscan:PS50827 | PANTHER:PTHR36968 | SMART:SM00389 | SMART:SM00571 | SUPFAM:SSF46689 | UniParc:UPI0004EE310E |
| InterPro:WHIM1_dom | InterPro:WHIM2_dom | SEG:seg | : | : | : |
Description
BnaA06g36270DBnaA06g36270D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G748]
Coordinates
chrLK032130:-:29706..36830
Molecular Weight (calculated)
183971.0 Da
IEP (calculated)
5.101
GRAVY (calculated)
-0.716
Length
1639 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEDGSEADKN VTPEGAAAAT ESKSKRKMKT AAQLQVLENT YKAEPYPSEA LRADLSVQLN LSDRQLQMWF CHRRLKDRKS STPTKRQRKE STPSSAAESS
0101: KQAAAVNAAD LVAGNELNSF DSRRTARGGG GGGVTVVRRF NEPSPTEVRA IGYVEAQLGE RLREDGPILG MEFDPLPPGA FGTPIAEMPT HRKAATRPAF
0201: ETNLYVRSDV KPVKESVRTI REYQFLPEQP SSRTDHSERA SPASHHYGVP LDASVVMRAS SVSGGHRDDY KVSPPIPNLN LSAHHVKPGH VLGEYDSPYQ
0301: KSYVDPTLHG NEDPFVKSER ELGNDDDDED DDGDVLLQLE RKRKSEEARI AREVEAHEKR IRKELERQDM LRRKREEQIR KEVERQDRER RKEEERLLRE
0401: RQREEERYLK EQMKEMQRRE KFLKKETIRA EKMRQKEEMR RVKEVARLKA ANERAMARKI AKESMELIED ERLELMEVAA LSLGLPSMVA LDFETLQNLD
0501: AYRDKQVTFP PTSVNLKKPF AVKPWNGSDE NIANLLMVWR FLINFADVLG LWPFTLDEFT QAFHDHDPRL MGEIHIVLLK TIIKDIEGVA RTLSVGVGAN
0601: QNAAANPGGG HPHLVEGAYA WGFDIRSWRK NLNVFTWPEI LRQLALSAGF GPELKKQDIK TMSVHDENEA NNSENVIFNL RIGAAAENAF AKMQEKGLSN
0701: PRRSRHRLTP GTVKFAAFHV LSIEGEKGLT ILEVAEKIQK SGLRDLTTSR TPEASVAAAL SRDTKLFERV APSTYCVRPS YRKDAGDAET IFAEARERIR
0801: MFKSGVTDVE DVDEAEREED SDSDVGDEPE VDLNLKKEDP DALEEIGKLT GGVEPSLENG KLETEPEANP LTPSLPEEST KDEKIDDILP DQEDGDCFDV
0901: SKLGEQWVQG LVEGDYSSLS IEERLNALVA LIGIAIEGNT IRISLEERLE VASALKKQMW SEVQLDKRWK EESLIRANYL SYPTPKTQES PSASQDPLSL
1001: PQIDVAAGPS LQLQENVSGM ENLQYHHQQS YTADRERLRA ELKAYVGYKA EELYVYRSLP LGLDRRRNRY WRFSASASRN DPGCGRIFVE LQDGRWRLID
1101: SEEGFDCLVK SLDVRGVRES HLHFMLLKME ASFKEAVRRN VETSTGLDTD TAEISSTFKI ELGDGGRSGV LQRFQSFERW MWDNMVHPGA LSAFKYGAKK
1201: STPLFHICRS CAELHFAVDV CCPGCGQMMM SGGLDVSEMC FADQLGEISR RDAGFILRGS NLSPLRIRLL KIQLALVEAS LPPEGLQTHW TESLRKTWGL
1301: KLLSSSSPEE LHQVLAMLEV ALKKDFLSSN FETTCELLDL SEEALVRDVK VVPWIPKTTG GVALRLFELD SSIAYTPDQN KDPQKDKESE DFVGLETNFL
1401: RNVQEHDVIE ATPVQVAYAQ EDTEPGSGRG RPPRGRGRPR SQRGKKPSPA SGKPPRSAAN SNGEPMLRPR AQPRGGRKKG RRSSGTRTRP TKGTLGISNE
1501: VVGVGGGGRR GKEVNVNAKT ALHDWVVETP DDDGEASSSG RSFQYDDDVM APVDDFGESS KLVGRGEFSL HSDDEYEEED MDTKMNVDDE DEDYINEEDS
1601: DGGREQATEM ISMDDAAASQ RRFPFEDPDL TSSSSSDFQ
0101: KQAAAVNAAD LVAGNELNSF DSRRTARGGG GGGVTVVRRF NEPSPTEVRA IGYVEAQLGE RLREDGPILG MEFDPLPPGA FGTPIAEMPT HRKAATRPAF
0201: ETNLYVRSDV KPVKESVRTI REYQFLPEQP SSRTDHSERA SPASHHYGVP LDASVVMRAS SVSGGHRDDY KVSPPIPNLN LSAHHVKPGH VLGEYDSPYQ
0301: KSYVDPTLHG NEDPFVKSER ELGNDDDDED DDGDVLLQLE RKRKSEEARI AREVEAHEKR IRKELERQDM LRRKREEQIR KEVERQDRER RKEEERLLRE
0401: RQREEERYLK EQMKEMQRRE KFLKKETIRA EKMRQKEEMR RVKEVARLKA ANERAMARKI AKESMELIED ERLELMEVAA LSLGLPSMVA LDFETLQNLD
0501: AYRDKQVTFP PTSVNLKKPF AVKPWNGSDE NIANLLMVWR FLINFADVLG LWPFTLDEFT QAFHDHDPRL MGEIHIVLLK TIIKDIEGVA RTLSVGVGAN
0601: QNAAANPGGG HPHLVEGAYA WGFDIRSWRK NLNVFTWPEI LRQLALSAGF GPELKKQDIK TMSVHDENEA NNSENVIFNL RIGAAAENAF AKMQEKGLSN
0701: PRRSRHRLTP GTVKFAAFHV LSIEGEKGLT ILEVAEKIQK SGLRDLTTSR TPEASVAAAL SRDTKLFERV APSTYCVRPS YRKDAGDAET IFAEARERIR
0801: MFKSGVTDVE DVDEAEREED SDSDVGDEPE VDLNLKKEDP DALEEIGKLT GGVEPSLENG KLETEPEANP LTPSLPEEST KDEKIDDILP DQEDGDCFDV
0901: SKLGEQWVQG LVEGDYSSLS IEERLNALVA LIGIAIEGNT IRISLEERLE VASALKKQMW SEVQLDKRWK EESLIRANYL SYPTPKTQES PSASQDPLSL
1001: PQIDVAAGPS LQLQENVSGM ENLQYHHQQS YTADRERLRA ELKAYVGYKA EELYVYRSLP LGLDRRRNRY WRFSASASRN DPGCGRIFVE LQDGRWRLID
1101: SEEGFDCLVK SLDVRGVRES HLHFMLLKME ASFKEAVRRN VETSTGLDTD TAEISSTFKI ELGDGGRSGV LQRFQSFERW MWDNMVHPGA LSAFKYGAKK
1201: STPLFHICRS CAELHFAVDV CCPGCGQMMM SGGLDVSEMC FADQLGEISR RDAGFILRGS NLSPLRIRLL KIQLALVEAS LPPEGLQTHW TESLRKTWGL
1301: KLLSSSSPEE LHQVLAMLEV ALKKDFLSSN FETTCELLDL SEEALVRDVK VVPWIPKTTG GVALRLFELD SSIAYTPDQN KDPQKDKESE DFVGLETNFL
1401: RNVQEHDVIE ATPVQVAYAQ EDTEPGSGRG RPPRGRGRPR SQRGKKPSPA SGKPPRSAAN SNGEPMLRPR AQPRGGRKKG RRSSGTRTRP TKGTLGISNE
1501: VVGVGGGGRR GKEVNVNAKT ALHDWVVETP DDDGEASSSG RSFQYDDDVM APVDDFGESS KLVGRGEFSL HSDDEYEEED MDTKMNVDDE DEDYINEEDS
1601: DGGREQATEM ISMDDAAASQ RRFPFEDPDL TSSSSSDFQ
0001: MEGGSEKTTP EGCGGESKSK RKMKTAAQLE VLENTYSAEP YPSEAIRADL SVKLNLSDRQ LQMWFCHRRL KERKSTTPSK RQRKELVTPT AMESWEPPVN
0101: AGDLVAGNEL DSRRAARGSG GSGVTVVRRF NEPSSAEVRA IGYVEAQLGE RLRDNGPVLG MEFDPLPPGA FGMPIEMPSH RKATRQAFET NIYVRSDVKP
0201: IKDHVRPIRE YQFIPELPSS RTDHSERVSP SHHFGVPLDG SVMRVSAVSA GHRDDYKISP QIPNLNLATH QGKPGHVYSP NLVEYDSPYQ KSYMDTAAQV
0301: HDDPFVKSER EVGNEDEDDD ALQLERHRKN EEARIAREVE AHEKRIRREL EKQDMLRRKR EEQIRKEMER QDRERRKEEE RLLREKQREE ERYLKEQMRE
0401: LQRREKFLKK ETIRAEKMRQ KEEMRKEKEV ARLKAANERA IARKIAKESM ELIEDERLEL MEVAALTKGL PSMLALDFET LQNLDEYRDK QAIFPPTSVK
0501: LKKPFAVKPW NGSDENVANL LMVWRFLITF ADVLGLWPFT LDEFAQAFHD YDPRLMGEIH IVLLKTIIKD IEGVVRTLST GVGANQNVAA NPGGGHPHVV
0601: EGAYAWGFDI RSWRKNLNVF TWPEILRQLA LSAGLGPQLK KMNIRTVSVH DDNEANNSEN VIFNLRKGVA AENAFAKMQE RGLSNPRRSR HRLTPGTVKF
0701: AAFHVLSLEG EKGLNILEVA EKIQKSGLRD LTTSRTPEAS VAAALSRDTK LFERVAPSTY CVRASYRKDA GDAETIFAEA RERIRAFKSG ITDVEDVDDA
0801: ERDEDSESDV GEDPEVDVNL KKEDPNPLKV ENLIGVEPLL ENGKLDTVPM KTELGLPLTP SLPEEMKDEK RDDTLADQSL EDAVANGEDS ACFDESKLGE
0901: QWVQGLVEGD YSNLSSEERL NALVALIGIA TEGNTIRIAL EERLEVASAL KKQMWGEVQL DKRWKEESLI RANYLSYPTA KPGLNIATPA SGNQESSSAD
1001: VTPISSQDPV SLPQIDVNNV IAGPSLQLQE NVPGVENLQY QQQQGYTADR ERLRAQLKAY VGYKAEELYV YRSLPLGQDR RRNRYWRFSA SASRNDPGCG
1101: RIFVELQDGR WRLIDSEEAF DYLVKSLDVR GVRESHLHFM LLKIEASFKE ALRRNVAANP GVCSISSSLD SDTAEISTTF KIELGDSNAV ERCSVLQRFH
1201: SFEKWMWDNM LHPSALSAFK YGAKQSSPLF RICRICAELH FVGDICCPSC GQMHAGPDVG ELCFAEQVAQ LGDNLRRGDT GFILRSSILS PLRIRLLKVQ
1301: LALVEASLPP EGLEAFWTEN LRKSWGMKLL SSSSHEDLYQ VLTTLEAALK RDFLSSNFET TSELLGLQEG ALASDLTCGV NVLPWIPKTA GGVALRLFDF
1401: DSSIVYTPDQ NNDPLKDKES EDFVGLETNI LRNLHEKDVM ETPVQVAAYK QEENWTDPGL GGVSSSGRGG RPPRGRGRPR ARGNGKKPAV SVKPPRGAAN
1501: SNGETMLRPR AQPRGGRKNG RRSGTKGRKR PTQGTLGICN EVGGGRRVKE VAVTAKTSLP DNDDDWIETP ELQDDDGEAS SSGRSFQYED YDDDDVMAPI
1601: DDFDGGGESS KLVGRGEFSL HSDDEYEEEE EEEEDMNMKM DVNVVDDEDE DYINEDSYGR KQHGISISND AATRKRFNKF EDPDLTSSSS SDFQ
0101: AGDLVAGNEL DSRRAARGSG GSGVTVVRRF NEPSSAEVRA IGYVEAQLGE RLRDNGPVLG MEFDPLPPGA FGMPIEMPSH RKATRQAFET NIYVRSDVKP
0201: IKDHVRPIRE YQFIPELPSS RTDHSERVSP SHHFGVPLDG SVMRVSAVSA GHRDDYKISP QIPNLNLATH QGKPGHVYSP NLVEYDSPYQ KSYMDTAAQV
0301: HDDPFVKSER EVGNEDEDDD ALQLERHRKN EEARIAREVE AHEKRIRREL EKQDMLRRKR EEQIRKEMER QDRERRKEEE RLLREKQREE ERYLKEQMRE
0401: LQRREKFLKK ETIRAEKMRQ KEEMRKEKEV ARLKAANERA IARKIAKESM ELIEDERLEL MEVAALTKGL PSMLALDFET LQNLDEYRDK QAIFPPTSVK
0501: LKKPFAVKPW NGSDENVANL LMVWRFLITF ADVLGLWPFT LDEFAQAFHD YDPRLMGEIH IVLLKTIIKD IEGVVRTLST GVGANQNVAA NPGGGHPHVV
0601: EGAYAWGFDI RSWRKNLNVF TWPEILRQLA LSAGLGPQLK KMNIRTVSVH DDNEANNSEN VIFNLRKGVA AENAFAKMQE RGLSNPRRSR HRLTPGTVKF
0701: AAFHVLSLEG EKGLNILEVA EKIQKSGLRD LTTSRTPEAS VAAALSRDTK LFERVAPSTY CVRASYRKDA GDAETIFAEA RERIRAFKSG ITDVEDVDDA
0801: ERDEDSESDV GEDPEVDVNL KKEDPNPLKV ENLIGVEPLL ENGKLDTVPM KTELGLPLTP SLPEEMKDEK RDDTLADQSL EDAVANGEDS ACFDESKLGE
0901: QWVQGLVEGD YSNLSSEERL NALVALIGIA TEGNTIRIAL EERLEVASAL KKQMWGEVQL DKRWKEESLI RANYLSYPTA KPGLNIATPA SGNQESSSAD
1001: VTPISSQDPV SLPQIDVNNV IAGPSLQLQE NVPGVENLQY QQQQGYTADR ERLRAQLKAY VGYKAEELYV YRSLPLGQDR RRNRYWRFSA SASRNDPGCG
1101: RIFVELQDGR WRLIDSEEAF DYLVKSLDVR GVRESHLHFM LLKIEASFKE ALRRNVAANP GVCSISSSLD SDTAEISTTF KIELGDSNAV ERCSVLQRFH
1201: SFEKWMWDNM LHPSALSAFK YGAKQSSPLF RICRICAELH FVGDICCPSC GQMHAGPDVG ELCFAEQVAQ LGDNLRRGDT GFILRSSILS PLRIRLLKVQ
1301: LALVEASLPP EGLEAFWTEN LRKSWGMKLL SSSSHEDLYQ VLTTLEAALK RDFLSSNFET TSELLGLQEG ALASDLTCGV NVLPWIPKTA GGVALRLFDF
1401: DSSIVYTPDQ NNDPLKDKES EDFVGLETNI LRNLHEKDVM ETPVQVAAYK QEENWTDPGL GGVSSSGRGG RPPRGRGRPR ARGNGKKPAV SVKPPRGAAN
1501: SNGETMLRPR AQPRGGRKNG RRSGTKGRKR PTQGTLGICN EVGGGRRVKE VAVTAKTSLP DNDDDWIETP ELQDDDGEAS SSGRSFQYED YDDDDVMAPI
1601: DDFDGGGESS KLVGRGEFSL HSDDEYEEEE EEEEDMNMKM DVNVVDDEDE DYINEDSYGR KQHGISISND AATRKRFNKF EDPDLTSSSS SDFQ
Arabidopsis Description
RLT2Homeobox-DDT domain protein RLT2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFH1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.