Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G245800.2 | Wheat | nucleus | 98.0 | 97.74 |
| TraesCS3A01G245700.2 | Wheat | nucleus | 97.51 | 97.3 |
| HORVU3Hr1G061660.1 | Barley | nucleus | 95.19 | 95.5 |
| Zm00001d043915_P002 | Maize | nucleus | 52.38 | 76.24 |
| KXG33081 | Sorghum | nucleus | 75.24 | 75.57 |
| KXG33083 | Sorghum | nucleus | 73.89 | 74.99 |
| Zm00001d011560_P012 | Maize | nucleus | 73.57 | 73.13 |
| Zm00001d043914_P001 | Maize | nucleus | 21.3 | 69.98 |
| OQU75646 | Sorghum | cytosol | 21.73 | 69.67 |
| TraesCS1B01G424100.1 | Wheat | nucleus | 63.84 | 63.39 |
| GSMUA_Achr9P06610_001 | Banana | nucleus | 53.89 | 56.23 |
| GSMUA_Achr8P27210_001 | Banana | nucleus | 56.92 | 55.16 |
| VIT_10s0003g00290.t01 | Wine grape | nucleus | 19.84 | 51.4 |
| VIT_12s0028g03090.t01 | Wine grape | nucleus | 41.84 | 50.79 |
| Solyc07g053610.2.1 | Tomato | nucleus | 44.16 | 45.85 |
| GSMUA_Achr6P26980_001 | Banana | nucleus | 54.32 | 44.79 |
| KRH21359 | Soybean | nucleus | 41.95 | 44.22 |
| KRH55891 | Soybean | nucleus | 41.78 | 43.4 |
| AT5G44180.1 | Thale cress | nucleus | 39.3 | 42.92 |
| CDY22305 | Canola | nucleus | 38.0 | 42.89 |
| Bra033725.1-P | Field mustard | nucleus | 37.89 | 42.74 |
| CDY35748 | Canola | nucleus | 35.68 | 42.64 |
| KRH20389 | Soybean | nucleus | 41.3 | 42.54 |
| KRH50116 | Soybean | nucleus | 40.97 | 42.54 |
| Bra010869.1-P | Field mustard | nucleus | 36.0 | 42.42 |
| CDX90154 | Canola | nucleus | 36.0 | 42.34 |
| CDX94760 | Canola | nucleus | 38.0 | 42.2 |
| VIT_10s0003g00270.t01 | Wine grape | nucleus | 25.3 | 41.75 |
| AT1G28420.1 | Thale cress | nucleus | 38.11 | 41.35 |
| Bra032908.1-P | Field mustard | nucleus | 36.54 | 40.67 |
| Solyc02g077660.2.1 | Tomato | nucleus | 36.86 | 40.64 |
| CDY34099 | Canola | nucleus | 36.49 | 40.54 |
| CDY65661 | Canola | nucleus | 36.22 | 40.07 |
| TraesCS2B01G147300.4 | Wheat | nucleus | 14.11 | 23.9 |
| TraesCS3B01G131700.9 | Wheat | nucleus | 14.11 | 23.68 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.7 | ncoils:Coil | InterPro:DDT_dom | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:HB1/Asxl_HTH | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom |
| InterPro:IPR001356 | InterPro:IPR018501 | PFAM:PF00046 | PFAM:PF02791 | PFAM:PF05066 | PFAM:PF15612 |
| PFAM:PF15613 | PFscan:PS50071 | PFscan:PS50827 | PANTHER:PTHR36968 | SMART:SM00389 | SMART:SM00571 |
| SUPFAM:SSF46689 | EnsemblPlantsGene:TraesCS3B01G273900 | EnsemblPlants:TraesCS3B01G273900.1 | InterPro:WHIM1_dom | InterPro:WHIM2_dom | TIGR:cd00086 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr3B:+:440876730..440889414
Molecular Weight (calculated)
206567.0 Da
IEP (calculated)
5.085
GRAVY (calculated)
-0.830
Length
1850 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDAAGAGDGP PREAPEERTP QTPAPPAVAA PASASGGAAG PSGSGEKPVK RMMKTPYQLD VLEQTYLAEQ YPSEAMRAEL SVKIGLSDRQ LQMWFCHRRL
0101: KDRKPPAKRQ RRDEEGPATP VPVPPQVLPI QAMPLGSTDI MMSAGSPYDE PLLPPTHSRR GAGRSSAVPR ISAPDIGRRY YEPLSVMLPP PVAPMQFRQA
0201: ELRVITSVES QLGEPLREDG PVLGVDFDPL PPGAFGAPIV PEQQKQPVRS YDAKIFSRHD PNLLKVSSFL PSMEHPFVPN SFAGKRKSMV GNPPPQVHPH
0301: GGSRAVHEYQ FLPEQPSDTY ERASRSHYYD TPVEASNSRI PSLTPGPHLL HVSEEMTPGY AFEGQGLLPQ SGRPQVFSAV STDYEMNQSN SNINSVPVDG
0401: QFGSSHVAGF EDPLISSETR AYHDEDASRV DRKRKHNEEA KIAKEVEAHE KRIRKELEKQ DIMRRKREEQ MRKEMERHDR ERRKEEERLL RERQREEERF
0501: QREQRREHER MEKFLQKQSR RAEKQRQKEE LRKEKEMARQ KAANERATAR RIAREYMELV EDERLELMEL AAQSKGLPSM LCLDSDTLQQ LDSFRGMLSH
0601: FPPEMVRLKA PLSIKPWTGS EESVGKLLMV WKFLITFADV LELSSVTLDE FIQSLHDYDS RLLGELHVAL LKSIIKDIED VARTPSVALG VNPGGGHPQI
0701: VEGAYSWGFN IRNWQRHLNL LTWPEILRQF ALSAGFGPQL KKRNAEDVFY RDENEGQDGQ NVISALRNGS AAVRAAALMK ERGYTHRRSR HRLTPGTVKF
0801: AAFHVLSLED SSGLTILEVA EKIQKSGLRD LTTSKTPEAS IAAALSRDTK LFERTAPSTY CVKSPYRKDP ADSEAVLSAA REKIRAFQNV LSDSEAEKEV
0901: DDVDRDEESD CDDDPDGDDV NIEVGDEKGP LLAVKAQGVI PTATKVGDVK GDPDDLDAAL TQPISSTTSR KDIAMLSLGD SSAVGTSSVS PLRASSDHPE
1001: VITGDPEDTQ IDESNQGESW VQGLAEGDYC DLSVEERLNA LVALVGVATE GNSIRAVLEE RLEAANAIKK QMWAEAQLDK RRSKEEFASK VQYNSYTSLK
1101: ADVIPENNAT ETTPTPVRNL DIDNDENAGT SNNNEILNQQ NNAGIVSYER NGTGQETSAT PDNLSAQQYA YADKTRSQLK SYIGHRAEQL YVYRLLPLGQ
1201: DRRRNRYWQF STSTSPNDPG SGRIFFESRE GYWRVIDSEE VFDALVASLD TRGSREAQLH SMLQRVESTF KEGIKRKRDA AIEQSAGRYL KNGATDTMRA
1301: SYRSEFGSPS STHSSVSADS ATTYSDSFKI ELGRNDVEKI SISKRTDGFL KWMWSECCDR QLTCAMKYGK KRCSALMHSC NYCYQIYLAE ERHCSSCHKT
1401: FKSIYNYSEH TSQCDEKRRT DPNWKMQIAD YSVPIGMRLL KLQLATIEAS IPSEALQPFW SDGYRKSWGV KLHSTTSIEE IFQMLTLLEG AIRRDYLSSD
1501: FETSNELLNN SKTEDMPSQN PSSLPGTSVL PWVPDTTAAI TLRMLDLDYA VSYVQNQKKE RDGGDSMKLA SRYTVVKKAQ DLEPLEPTGF DLYDARGPPS
1601: SGRRGRGRGS RGGSRGGRGR SRGGRIPRGI SSSSRIEFMD EDAAYEKAPR KNARRGRGRG RGRGRGRRTV RPRQPSSEGR GRSIPKANLL GSFSMLSNVK
1701: PSAVEESPRS SGAEEWGLES RRPYIQGDGD ENSSESESDQ SEDNGENGQP MDEEYEEQVP DYSRAYSGGL RPHAHVMLDD ETEDDDEDAE GDGEGDEEEY
1801: DVNHASADVD DEMDEDDDDI GNDGDDGGDG VEVNADEDEG ATSYSSEYSE
0101: KDRKPPAKRQ RRDEEGPATP VPVPPQVLPI QAMPLGSTDI MMSAGSPYDE PLLPPTHSRR GAGRSSAVPR ISAPDIGRRY YEPLSVMLPP PVAPMQFRQA
0201: ELRVITSVES QLGEPLREDG PVLGVDFDPL PPGAFGAPIV PEQQKQPVRS YDAKIFSRHD PNLLKVSSFL PSMEHPFVPN SFAGKRKSMV GNPPPQVHPH
0301: GGSRAVHEYQ FLPEQPSDTY ERASRSHYYD TPVEASNSRI PSLTPGPHLL HVSEEMTPGY AFEGQGLLPQ SGRPQVFSAV STDYEMNQSN SNINSVPVDG
0401: QFGSSHVAGF EDPLISSETR AYHDEDASRV DRKRKHNEEA KIAKEVEAHE KRIRKELEKQ DIMRRKREEQ MRKEMERHDR ERRKEEERLL RERQREEERF
0501: QREQRREHER MEKFLQKQSR RAEKQRQKEE LRKEKEMARQ KAANERATAR RIAREYMELV EDERLELMEL AAQSKGLPSM LCLDSDTLQQ LDSFRGMLSH
0601: FPPEMVRLKA PLSIKPWTGS EESVGKLLMV WKFLITFADV LELSSVTLDE FIQSLHDYDS RLLGELHVAL LKSIIKDIED VARTPSVALG VNPGGGHPQI
0701: VEGAYSWGFN IRNWQRHLNL LTWPEILRQF ALSAGFGPQL KKRNAEDVFY RDENEGQDGQ NVISALRNGS AAVRAAALMK ERGYTHRRSR HRLTPGTVKF
0801: AAFHVLSLED SSGLTILEVA EKIQKSGLRD LTTSKTPEAS IAAALSRDTK LFERTAPSTY CVKSPYRKDP ADSEAVLSAA REKIRAFQNV LSDSEAEKEV
0901: DDVDRDEESD CDDDPDGDDV NIEVGDEKGP LLAVKAQGVI PTATKVGDVK GDPDDLDAAL TQPISSTTSR KDIAMLSLGD SSAVGTSSVS PLRASSDHPE
1001: VITGDPEDTQ IDESNQGESW VQGLAEGDYC DLSVEERLNA LVALVGVATE GNSIRAVLEE RLEAANAIKK QMWAEAQLDK RRSKEEFASK VQYNSYTSLK
1101: ADVIPENNAT ETTPTPVRNL DIDNDENAGT SNNNEILNQQ NNAGIVSYER NGTGQETSAT PDNLSAQQYA YADKTRSQLK SYIGHRAEQL YVYRLLPLGQ
1201: DRRRNRYWQF STSTSPNDPG SGRIFFESRE GYWRVIDSEE VFDALVASLD TRGSREAQLH SMLQRVESTF KEGIKRKRDA AIEQSAGRYL KNGATDTMRA
1301: SYRSEFGSPS STHSSVSADS ATTYSDSFKI ELGRNDVEKI SISKRTDGFL KWMWSECCDR QLTCAMKYGK KRCSALMHSC NYCYQIYLAE ERHCSSCHKT
1401: FKSIYNYSEH TSQCDEKRRT DPNWKMQIAD YSVPIGMRLL KLQLATIEAS IPSEALQPFW SDGYRKSWGV KLHSTTSIEE IFQMLTLLEG AIRRDYLSSD
1501: FETSNELLNN SKTEDMPSQN PSSLPGTSVL PWVPDTTAAI TLRMLDLDYA VSYVQNQKKE RDGGDSMKLA SRYTVVKKAQ DLEPLEPTGF DLYDARGPPS
1601: SGRRGRGRGS RGGSRGGRGR SRGGRIPRGI SSSSRIEFMD EDAAYEKAPR KNARRGRGRG RGRGRGRRTV RPRQPSSEGR GRSIPKANLL GSFSMLSNVK
1701: PSAVEESPRS SGAEEWGLES RRPYIQGDGD ENSSESESDQ SEDNGENGQP MDEEYEEQVP DYSRAYSGGL RPHAHVMLDD ETEDDDEDAE GDGEGDEEEY
1801: DVNHASADVD DEMDEDDDDI GNDGDDGGDG VEVNADEDEG ATSYSSEYSE
0001: MEMGSDGEDQ KIRSVVGDAN LNNKKKKIDN NSSSKDGRVK PKRQMKTPFQ LETLEKVYSE EKYPSEATRA ELSEKLDLSD RQLQMWFCHR RLKDKKDGQS
0101: NKPVKSSVAA VQSASVNELP AAAGSVPEQD SRSDSGSESG CSPYSNSRRN FASGSSSSRA ELDEYETMGK PSYESRLSTM VHRAIVCIEA QLGEPLRDDG
0201: PILGMEFDPL PPGAFGTPIA MQKHLLHPYE SDLYERHDPR PRRSHAAARS FHEQQSLDDP SSFTPNMYER YSENHARGMD YEVARSRISS FMHANGPVPR
0301: SYVTPGHASR NCSTSQQDMP SPIESAHHGD RFLLEKDSSV LGTEDPYLLP DGVRKSSDVH RKGKINDGRL GRGSETRENH GPKDLEKLEI QRKKNEERMR
0401: KEMERNERER RKEEERLMRE RIKEEERLQR EQRREVERRE KFLQRENERA EKKKQKDEIR REKDAIRRKL AIEKATARRI AKESMDLIED EQLELMELAA
0501: ISKGLPSVLQ LDHDTLQNLE VYRDSLSTFP PKSLQLKMPF AISPWKDSDE TVGNLLMVWR FLISFSDVLD LWPFTLDEFI QAFHDYDSRL LGEIHVTLLR
0601: SIIRDVEDVA RTPFSGIGNN QYTTANPEGG HPQIVEGAYA WGFDIRSWKK HLNPLTWPEI LRQLALSAGF GPKLKKKHSR LTNTGDKDEA KGCEDVISTI
0701: RNGTAAESAF ASMREKGLLA PRKSRHRLTP GTVKFAAFHV LSLEGSKGLT VLELADKIQK SGLRDLTTSK TPEASISVAL TRDVKLFERI APSTYCVRAP
0801: YVKDPKDGEA ILADARKKIR AFENGFTGPE DVNDLERDED FEIDIDEDPE VDDLATLASA SKSAVLGEAN VLSGKGVDTM FCDVKADVKS ELEKEFSSPP
0901: PSTMKSIVPQ HSERHKNTVV GGVDAVIDES NQGQSWIQGL TEGDYCHLSV EERLNALVAL VGIANEGNSI RTGLEDRMEA ANALKKQMWA EAQLDNSCMR
1001: DVLKLDLQNL ASSKTESTIG LPIIQSSTRE RDSFDRDPSQ LLDETKPLED LSNDLHKSSA ERALINQDAN ISQENYASKR SRSQLKSYIG HKAEEVYPYR
1101: SLPLGQDRRH NRYWHFAVSV SKSDPCSRLL FVELHDGKWL LIDSEEAFDI LVASLDMRGI RESHLRIMLQ KIEGSFKENA CKDIKLARNP FLTEKSVVNH
1201: SPTDSVSPSS SAISGSNSDS METSTSIRVD LGRNDTENKN LSKRFHDFQR WMWTETYSSL PSCARKYGKK RSELLATCDA CVASYLSEYT FCSSCHQRLD
1301: VVDSSEILDS GLAVSPLPFG VRLLKPLLVF LEASVPDEAL ESFWTEDQRK KWGFRLNTSS SPGELLQVLT SLESAIKKES LSSNFMSAKE LLGAANAEAD
1401: DQGSVDVLPW IPKTVSAVAL RLSELDASII YVKPEKPEVI PEDENEQISL FPRDSPFKGK GPREQEDQDE VAPNPGNRNK KRARVSLGSG SNRKVKRKKA
1501: QSGLNKFVVG RRNVAVNSNL MAVELNHQVP GKGKRTVRKR PERIDEDNSH LVNRMANIVR PKSEEVEEDE EEEEQTFRDI NEDWAAGETP REMEEDWANE
1601: TPNRMMTPMQ VDDESDNSVG VESEDEDGGG QFVDYSQRNK WGLDWNSNLN VAIEEDEEEE VVGVGRVEGE DDAEMSESSE DDDVPANNAA NNYDRESEGY
1701: SSSDS
0101: NKPVKSSVAA VQSASVNELP AAAGSVPEQD SRSDSGSESG CSPYSNSRRN FASGSSSSRA ELDEYETMGK PSYESRLSTM VHRAIVCIEA QLGEPLRDDG
0201: PILGMEFDPL PPGAFGTPIA MQKHLLHPYE SDLYERHDPR PRRSHAAARS FHEQQSLDDP SSFTPNMYER YSENHARGMD YEVARSRISS FMHANGPVPR
0301: SYVTPGHASR NCSTSQQDMP SPIESAHHGD RFLLEKDSSV LGTEDPYLLP DGVRKSSDVH RKGKINDGRL GRGSETRENH GPKDLEKLEI QRKKNEERMR
0401: KEMERNERER RKEEERLMRE RIKEEERLQR EQRREVERRE KFLQRENERA EKKKQKDEIR REKDAIRRKL AIEKATARRI AKESMDLIED EQLELMELAA
0501: ISKGLPSVLQ LDHDTLQNLE VYRDSLSTFP PKSLQLKMPF AISPWKDSDE TVGNLLMVWR FLISFSDVLD LWPFTLDEFI QAFHDYDSRL LGEIHVTLLR
0601: SIIRDVEDVA RTPFSGIGNN QYTTANPEGG HPQIVEGAYA WGFDIRSWKK HLNPLTWPEI LRQLALSAGF GPKLKKKHSR LTNTGDKDEA KGCEDVISTI
0701: RNGTAAESAF ASMREKGLLA PRKSRHRLTP GTVKFAAFHV LSLEGSKGLT VLELADKIQK SGLRDLTTSK TPEASISVAL TRDVKLFERI APSTYCVRAP
0801: YVKDPKDGEA ILADARKKIR AFENGFTGPE DVNDLERDED FEIDIDEDPE VDDLATLASA SKSAVLGEAN VLSGKGVDTM FCDVKADVKS ELEKEFSSPP
0901: PSTMKSIVPQ HSERHKNTVV GGVDAVIDES NQGQSWIQGL TEGDYCHLSV EERLNALVAL VGIANEGNSI RTGLEDRMEA ANALKKQMWA EAQLDNSCMR
1001: DVLKLDLQNL ASSKTESTIG LPIIQSSTRE RDSFDRDPSQ LLDETKPLED LSNDLHKSSA ERALINQDAN ISQENYASKR SRSQLKSYIG HKAEEVYPYR
1101: SLPLGQDRRH NRYWHFAVSV SKSDPCSRLL FVELHDGKWL LIDSEEAFDI LVASLDMRGI RESHLRIMLQ KIEGSFKENA CKDIKLARNP FLTEKSVVNH
1201: SPTDSVSPSS SAISGSNSDS METSTSIRVD LGRNDTENKN LSKRFHDFQR WMWTETYSSL PSCARKYGKK RSELLATCDA CVASYLSEYT FCSSCHQRLD
1301: VVDSSEILDS GLAVSPLPFG VRLLKPLLVF LEASVPDEAL ESFWTEDQRK KWGFRLNTSS SPGELLQVLT SLESAIKKES LSSNFMSAKE LLGAANAEAD
1401: DQGSVDVLPW IPKTVSAVAL RLSELDASII YVKPEKPEVI PEDENEQISL FPRDSPFKGK GPREQEDQDE VAPNPGNRNK KRARVSLGSG SNRKVKRKKA
1501: QSGLNKFVVG RRNVAVNSNL MAVELNHQVP GKGKRTVRKR PERIDEDNSH LVNRMANIVR PKSEEVEEDE EEEEQTFRDI NEDWAAGETP REMEEDWANE
1601: TPNRMMTPMQ VDDESDNSVG VESEDEDGGG QFVDYSQRNK WGLDWNSNLN VAIEEDEEEE VVGVGRVEGE DDAEMSESSE DDDVPANNAA NNYDRESEGY
1701: SSSDS
Arabidopsis Description
RLT1Homeobox-DDT domain protein RLT1 [Source:UniProtKB/Swiss-Prot;Acc:F4HY56]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.