Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G124800.1 | Wheat | nucleus | 97.34 | 97.52 |
| TraesCS2D01G127700.1 | Wheat | vacuole | 96.98 | 95.41 |
| TraesCS3B01G131700.9 | Wheat | nucleus | 93.68 | 92.83 |
| HORVU2Hr1G021950.4 | Barley | nucleus, plastid | 95.88 | 88.13 |
| EER90701 | Sorghum | nucleus | 66.76 | 63.56 |
| Zm00001d034515_P002 | Maize | nucleus | 65.66 | 60.87 |
| GSMUA_Achr9P24830_001 | Banana | cytosol, nucleus, plasma membrane | 39.74 | 53.45 |
| VIT_07s0005g06050.t01 | Wine grape | extracellular | 11.26 | 46.42 |
| CDX89461 | Canola | cytosol, endoplasmic reticulum | 20.05 | 45.44 |
| PGSC0003DMT400002603 | Potato | cytosol | 35.62 | 45.29 |
| VIT_19s0085g00350.t01 | Wine grape | nucleus | 44.69 | 41.18 |
| KRH41406 | Soybean | nucleus | 40.2 | 40.61 |
| KRH60120 | Soybean | nucleus | 40.2 | 40.57 |
| GSMUA_Achr6P22010_001 | Banana | nucleus | 37.91 | 39.96 |
| AT4G12750.1 | Thale cress | nucleus | 40.75 | 39.84 |
| Solyc11g006200.1.1 | Tomato | nucleus | 38.46 | 38.89 |
| Bra014277.1-P | Field mustard | nucleus | 35.53 | 38.04 |
| CDY60841 | Canola | nucleus | 34.8 | 36.47 |
| CDY51255 | Canola | nucleus | 34.71 | 36.3 |
| TraesCS3B01G273900.1 | Wheat | nucleus | 23.9 | 14.11 |
| TraesCS1B01G424100.1 | Wheat | nucleus | 23.44 | 13.74 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:35.1 | InterPro:DDT_dom | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR018501 | PFAM:PF00046 |
| PFAM:PF02791 | PFAM:PF15612 | PFAM:PF15613 | PFscan:PS50071 | PFscan:PS50827 | PANTHER:PTHR10390 |
| PANTHER:PTHR10390:SF44 | SMART:SM00389 | SMART:SM00571 | SUPFAM:SSF46689 | EnsemblPlantsGene:TraesCS2B01G147300 | EnsemblPlants:TraesCS2B01G147300.4 |
| InterPro:WHIM1_dom | InterPro:WHIM2_dom | TIGR:cd00086 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr2B:-:113274591..113285193
Molecular Weight (calculated)
122284.0 Da
IEP (calculated)
7.246
GRAVY (calculated)
-0.525
Length
1092 amino acids
Sequence
(BLAST)
(BLAST)
0001: MMAKGFLAKS DNAGTKKSPL QIQMLESFYS EVQYPKPEDV TEYAASVGLT YNQVRIWFKE RRRKEKRHME AAEVHMETQA SARSNWPRCS SSRSSNSSQS
0101: PTQDTTGHHS YQDQSVLKKR KIMSPTAQRS TLPFENNDPV RKHGKGKGLM TVWHAMYSQT AEIQDCSSFI DESGCLRSLR PFEDCGRKLA QVQRQTSPQK
0201: KVNKKSRPPP SKRKVPCGRV TDLTEHPPVE CHLSVDESES SELRTEQATL VDDEELELSE LQAGPNPLRC SAHLSSTGRH GCPLCKDLLA RFPPPSVRMK
0301: QLFPTKPWES SPEMVKKLFQ VVRFVYTHFG SLDVHPFTFD EFAQAFHDKD SSLLGKVHVS LLKLLMLNTE RGSGSVFVPR SSKDSRFLSF LNFVREQEFD
0401: VNFWIKSLNS LTWVEILRQV LVASGFGSDH HMLNRNFFNK EKNQMVKYGL RPRTLKGELF ALLSKKGSSG LKVAELAKSP QIIGINLSGA SEVEQLIFST
0501: LSSDITLFEK IAPSAYRLRV DPRIKGKEDP ISDTEDSGTV DDDGDASSSG DESDGPQESY PEHESRIVRW RQKNVNKNMN KCSEIDESYS GERWLLGLME
0601: GEYSDLSIDE KLDCLVALID VVSGAGSVPR LEEPQSVLSN IQRAQSHASG GKIKKCTRTI YQSSDEYLNR PGSSHSFDSS MQGQSGSLRS QDYIADSGAN
0701: ESPTGFAHQP QIVLLGSDRR YNNYWLFLGL CRADDPGHRR VYFESSEDGH WEVIDSPQDL LSLLSVLDIR GTREAHLLAS MKKRQSCLFE GMKKHLEDGC
0801: VVALTASSDS SRSETSSGNR YSPKPSSGDG ASPLSDIDSA SVPTYLAGNL QNASSAIGIE VGKRSDEKMS KWERLQALDK WIWTSFYSSL TAVKCGKRSF
0901: KESLVHCESC HDLYWRDEKH CRICHSTFEV GFDLEERHAI HVATCREPED LYDVPNHKVL PSQLQALKAA IHAIEALMPT AAFAGLWMKS SHNLWVKRLR
1001: RTSSLPELLQ VLVDFVGAID EDWLYQSSSA VSFSSYLDDI TVYFQTMPQT TSAVALWVVK LDALIAPHLA QADSGRGLGK GSIQTRAQAC LR
0101: PTQDTTGHHS YQDQSVLKKR KIMSPTAQRS TLPFENNDPV RKHGKGKGLM TVWHAMYSQT AEIQDCSSFI DESGCLRSLR PFEDCGRKLA QVQRQTSPQK
0201: KVNKKSRPPP SKRKVPCGRV TDLTEHPPVE CHLSVDESES SELRTEQATL VDDEELELSE LQAGPNPLRC SAHLSSTGRH GCPLCKDLLA RFPPPSVRMK
0301: QLFPTKPWES SPEMVKKLFQ VVRFVYTHFG SLDVHPFTFD EFAQAFHDKD SSLLGKVHVS LLKLLMLNTE RGSGSVFVPR SSKDSRFLSF LNFVREQEFD
0401: VNFWIKSLNS LTWVEILRQV LVASGFGSDH HMLNRNFFNK EKNQMVKYGL RPRTLKGELF ALLSKKGSSG LKVAELAKSP QIIGINLSGA SEVEQLIFST
0501: LSSDITLFEK IAPSAYRLRV DPRIKGKEDP ISDTEDSGTV DDDGDASSSG DESDGPQESY PEHESRIVRW RQKNVNKNMN KCSEIDESYS GERWLLGLME
0601: GEYSDLSIDE KLDCLVALID VVSGAGSVPR LEEPQSVLSN IQRAQSHASG GKIKKCTRTI YQSSDEYLNR PGSSHSFDSS MQGQSGSLRS QDYIADSGAN
0701: ESPTGFAHQP QIVLLGSDRR YNNYWLFLGL CRADDPGHRR VYFESSEDGH WEVIDSPQDL LSLLSVLDIR GTREAHLLAS MKKRQSCLFE GMKKHLEDGC
0801: VVALTASSDS SRSETSSGNR YSPKPSSGDG ASPLSDIDSA SVPTYLAGNL QNASSAIGIE VGKRSDEKMS KWERLQALDK WIWTSFYSSL TAVKCGKRSF
0901: KESLVHCESC HDLYWRDEKH CRICHSTFEV GFDLEERHAI HVATCREPED LYDVPNHKVL PSQLQALKAA IHAIEALMPT AAFAGLWMKS SHNLWVKRLR
1001: RTSSLPELLQ VLVDFVGAID EDWLYQSSSA VSFSSYLDDI TVYFQTMPQT TSAVALWVVK LDALIAPHLA QADSGRGLGK GSIQTRAQAC LR
0001: MKRKSPLQVQ ALEGFYLEQM YPTPKEMEDL GKSLGLTLKE VRGWFKRRRS RGKGVKSMAN DGLGAKNPQL YDRSLMRSST SSRCVGVAVE ERCIVGTRKA
0101: SCQNLLPSSH ILAKVFRKDG PSLGSEFDHL PSGARKASWL GTSSVGQQKQ KVARKRKISE LMDHTSQDCI QENATVMKHG IGKGLMTVWR VMNPNRRDVS
0201: PCVDLLDERA TLPQSSARNP PHQKKKQRQL ASILKQKLLQ KRSTEKKRRS IHREAELNKD ETQREFKENC ELAADGEVFK ETCQTISTLV DDEELEMRER
0301: HERGNPLTCS CHHPSSGSHG CFLCKDLLPK FPPNSVQMRM PFGLHPWNSS PESVKKLFKV VHFLYTYSVT LDIGPFTLDE FTRAFHDKDS LLLGKIHLSL
0401: LKLLLLDVET ELERGSFSNL SISCKFLALL QSVESQILIL DMWRNSLNSL TWTELLRQIL VAAGYGSLKC AVQSEELSKE RKLMKKYGLR LGTLKGELFR
0501: MLNGQGNNGL KISELADAPE VAVLNLATVP EERENSICST LASDITLFEK ISESTYRVRV NCFSEDPDKS QSDSDDSGSV DDESDDCSIS SGDEIEHVSE
0601: NPALRKVKCR KRRKHKSKMR EVCSEIDESH PGEPWLLGLM EGEYSDLSVE EKLDVFVALI DLLSSGSTIR MEDLPRAVAD CAPSIYSHGS GGKIKRSSSN
0701: QYSYPRGSWV HGGELYGIKA LSKSSDSHPV DSSSIVGAFA KLAGNRANNV HPMQSVYLGS DRRFNRYWLF LGTCNANDPG HRCVFFESSE DGHWEVINNK
0801: EALRALLSVL DDRGRREARL IESLEKRESF LCQAMLSRQV TQSETAHFTD IVREDSSSPV SDIDNNLCLN EIANDQFSSQ HAAIVFEIGS KREKSLLWSL
0901: IQEFDDWIWA NFNFNLNSVK HRRRSYLDSL TRCKSCHDLY WRDEKHCKIC HATFEVDIDL EERYAIHAAT CMRKEECDTF PDHKVLSSQL QSLKAAVYAI
1001: ESAMPEDALI GAWRKSAHRL WAKRLRRSSS VSEITQVIGD FVGAINEEWL WHCSDQGQTL MGEIINCFPS MPQTTSAIAL WLVKLDTLIA PYVEKAPPER
1101: DQPLCRTRNT SRRASKR
0101: SCQNLLPSSH ILAKVFRKDG PSLGSEFDHL PSGARKASWL GTSSVGQQKQ KVARKRKISE LMDHTSQDCI QENATVMKHG IGKGLMTVWR VMNPNRRDVS
0201: PCVDLLDERA TLPQSSARNP PHQKKKQRQL ASILKQKLLQ KRSTEKKRRS IHREAELNKD ETQREFKENC ELAADGEVFK ETCQTISTLV DDEELEMRER
0301: HERGNPLTCS CHHPSSGSHG CFLCKDLLPK FPPNSVQMRM PFGLHPWNSS PESVKKLFKV VHFLYTYSVT LDIGPFTLDE FTRAFHDKDS LLLGKIHLSL
0401: LKLLLLDVET ELERGSFSNL SISCKFLALL QSVESQILIL DMWRNSLNSL TWTELLRQIL VAAGYGSLKC AVQSEELSKE RKLMKKYGLR LGTLKGELFR
0501: MLNGQGNNGL KISELADAPE VAVLNLATVP EERENSICST LASDITLFEK ISESTYRVRV NCFSEDPDKS QSDSDDSGSV DDESDDCSIS SGDEIEHVSE
0601: NPALRKVKCR KRRKHKSKMR EVCSEIDESH PGEPWLLGLM EGEYSDLSVE EKLDVFVALI DLLSSGSTIR MEDLPRAVAD CAPSIYSHGS GGKIKRSSSN
0701: QYSYPRGSWV HGGELYGIKA LSKSSDSHPV DSSSIVGAFA KLAGNRANNV HPMQSVYLGS DRRFNRYWLF LGTCNANDPG HRCVFFESSE DGHWEVINNK
0801: EALRALLSVL DDRGRREARL IESLEKRESF LCQAMLSRQV TQSETAHFTD IVREDSSSPV SDIDNNLCLN EIANDQFSSQ HAAIVFEIGS KREKSLLWSL
0901: IQEFDDWIWA NFNFNLNSVK HRRRSYLDSL TRCKSCHDLY WRDEKHCKIC HATFEVDIDL EERYAIHAAT CMRKEECDTF PDHKVLSSQL QSLKAAVYAI
1001: ESAMPEDALI GAWRKSAHRL WAKRLRRSSS VSEITQVIGD FVGAINEEWL WHCSDQGQTL MGEIINCFPS MPQTTSAIAL WLVKLDTLIA PYVEKAPPER
1101: DQPLCRTRNT SRRASKR
Arabidopsis Description
Homeodomain-like transcriptional regulator [Source:TAIR;Acc:AT4G12750]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.