Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G124800.1 | Wheat | nucleus | 93.1 | 94.13 |
| TraesCS2B01G147300.4 | Wheat | nucleus | 92.83 | 93.68 |
| TraesCS2D01G127700.1 | Wheat | vacuole | 92.83 | 92.16 |
| HORVU2Hr1G021950.4 | Barley | nucleus, plastid | 91.92 | 85.27 |
| EER90701 | Sorghum | nucleus | 65.61 | 63.03 |
| Zm00001d034515_P002 | Maize | nucleus | 65.34 | 61.12 |
| GSMUA_Achr9P24830_001 | Banana | cytosol, nucleus, plasma membrane | 39.47 | 53.57 |
| VIT_07s0005g06050.t01 | Wine grape | extracellular | 11.07 | 46.04 |
| CDX89461 | Canola | cytosol, endoplasmic reticulum | 19.87 | 45.44 |
| PGSC0003DMT400002603 | Potato | cytosol | 35.39 | 45.4 |
| VIT_19s0085g00350.t01 | Wine grape | nucleus | 43.92 | 40.84 |
| KRH41406 | Soybean | nucleus | 39.56 | 40.33 |
| KRH60120 | Soybean | nucleus | 39.56 | 40.3 |
| GSMUA_Achr6P22010_001 | Banana | nucleus | 37.48 | 39.86 |
| AT4G12750.1 | Thale cress | nucleus | 40.02 | 39.48 |
| Solyc11g006200.1.1 | Tomato | nucleus | 38.02 | 38.8 |
| Bra014277.1-P | Field mustard | nucleus | 34.94 | 37.75 |
| CDY60841 | Canola | nucleus | 34.39 | 36.37 |
| CDY51255 | Canola | nucleus | 34.3 | 36.21 |
| TraesCS3B01G273900.1 | Wheat | nucleus | 23.68 | 14.11 |
| TraesCS1B01G424100.1 | Wheat | nucleus | 23.32 | 13.79 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:35.1 | InterPro:DDT_dom | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR018501 | PFAM:PF00046 |
| PFAM:PF02791 | PFAM:PF15612 | PFAM:PF15613 | PFscan:PS50071 | PFscan:PS50827 | PANTHER:PTHR10390 |
| PANTHER:PTHR10390:SF44 | SMART:SM00389 | SMART:SM00571 | SUPFAM:SSF46689 | EnsemblPlantsGene:TraesCS3B01G131700 | EnsemblPlants:TraesCS3B01G131700.9 |
| InterPro:WHIM1_dom | InterPro:WHIM2_dom | TIGR:cd00086 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr3B:-:114096330..114105899
Molecular Weight (calculated)
123772.0 Da
IEP (calculated)
7.405
GRAVY (calculated)
-0.519
Length
1102 amino acids
Sequence
(BLAST)
(BLAST)
0001: MMAKGFLAKS DNAGTKKSPL QIQMLESFYS EVQYPKPEDL TEYAASVGLT YNQVRIWFKE RRRKERRHME AAEVYMETQA TARSNWPRCS SSRSSNSSQS
0101: PMQVVADTTG HHSYQDQSVL KKRKIMSPTA QRFTLPFENN DPVRKHGKGK GLMTVWHAMY SQTAEIQDCS SFIDETGCLR SLRPFEDFGG KLAQKQTLPR
0201: KKVNKKSRSS PSKRKVPCGR VTDLKEHPPV ECHLSVDESE SSELRTEQAT LVDDEELELS ELQAGPNPLR CSAHISSTGR HGCPLCKDLL ARFPPPSVRM
0301: KQPFPTKPWE SSPEMVKKLF QVVRFVYTHF GSMDVHPFTF DEFAQAFHDK DSSLLGKVHV SLLKLLMLNT ERGSGSVFVP RSSKDSRFSS FLNFVREQEF
0401: DVNFWIKSLN SLTWVEILRQ VLVASGFGSD HHMLNRNFFN KEKNQMVKYG LRPRTLKGEL FTLLSKKGSG GLKVAELAKS PQIIGLNLSG ASEVEQLIFS
0501: TLSSDITLFE KIAPCAYRLR VDPRIKGKED PRSDTEDSGT VDNDGDASSS GDESDGPQES YPEHESRIVR WRQKNVHKNM NKCSEIDESY SGERWLLGLM
0601: EGEYSDLSID EKLDCLVALI DVVSGAGSVP RLEEPQSVLS NIQRAQSHAS GGKIKKCTRT IYQSSDEYLN RPGSSHSFDS SMQGQSGSLR SQDYIADSGA
0701: NESPTGFAHQ PQIVLLGSDR RYNNYWLFLG PCRADDPGHR RVYFESSEDG HWEVIDSPQD LLSLLSVLDI RGTREAHLLA SMKKRQSCLF EGMKKHLEDG
0801: CVVALTASSD SSRSETSSGN RYSPKPSSGD GASPLSDIDS ASVPIYLAGN LQNASSAIGI EVGRRSDEKM LKWERLQALD KWIWTSFYSS LTAVKCGKRS
0901: FKESLVHCES CHDLYWRDEK HCRICHSTFE VGFDLEERYA IHVATCREPE DLYDVPNHKV LPSQLQALKA AIHAIEARMP TAAFAGLWMK SSHNLWVKRL
1001: RRTSSLPELL QVLVDFVGAF DEDWLYQSSS AVSFSSYLDD ITVYFQTMPQ TTSAVALWVV KLDALIAPHL AQADSGRGLG KGSIQTSMYL ADSQSYLLPP
1101: FR
0101: PMQVVADTTG HHSYQDQSVL KKRKIMSPTA QRFTLPFENN DPVRKHGKGK GLMTVWHAMY SQTAEIQDCS SFIDETGCLR SLRPFEDFGG KLAQKQTLPR
0201: KKVNKKSRSS PSKRKVPCGR VTDLKEHPPV ECHLSVDESE SSELRTEQAT LVDDEELELS ELQAGPNPLR CSAHISSTGR HGCPLCKDLL ARFPPPSVRM
0301: KQPFPTKPWE SSPEMVKKLF QVVRFVYTHF GSMDVHPFTF DEFAQAFHDK DSSLLGKVHV SLLKLLMLNT ERGSGSVFVP RSSKDSRFSS FLNFVREQEF
0401: DVNFWIKSLN SLTWVEILRQ VLVASGFGSD HHMLNRNFFN KEKNQMVKYG LRPRTLKGEL FTLLSKKGSG GLKVAELAKS PQIIGLNLSG ASEVEQLIFS
0501: TLSSDITLFE KIAPCAYRLR VDPRIKGKED PRSDTEDSGT VDNDGDASSS GDESDGPQES YPEHESRIVR WRQKNVHKNM NKCSEIDESY SGERWLLGLM
0601: EGEYSDLSID EKLDCLVALI DVVSGAGSVP RLEEPQSVLS NIQRAQSHAS GGKIKKCTRT IYQSSDEYLN RPGSSHSFDS SMQGQSGSLR SQDYIADSGA
0701: NESPTGFAHQ PQIVLLGSDR RYNNYWLFLG PCRADDPGHR RVYFESSEDG HWEVIDSPQD LLSLLSVLDI RGTREAHLLA SMKKRQSCLF EGMKKHLEDG
0801: CVVALTASSD SSRSETSSGN RYSPKPSSGD GASPLSDIDS ASVPIYLAGN LQNASSAIGI EVGRRSDEKM LKWERLQALD KWIWTSFYSS LTAVKCGKRS
0901: FKESLVHCES CHDLYWRDEK HCRICHSTFE VGFDLEERYA IHVATCREPE DLYDVPNHKV LPSQLQALKA AIHAIEARMP TAAFAGLWMK SSHNLWVKRL
1001: RRTSSLPELL QVLVDFVGAF DEDWLYQSSS AVSFSSYLDD ITVYFQTMPQ TTSAVALWVV KLDALIAPHL AQADSGRGLG KGSIQTSMYL ADSQSYLLPP
1101: FR
0001: MKRKSPLQVQ ALEGFYLEQM YPTPKEMEDL GKSLGLTLKE VRGWFKRRRS RGKGVKSMAN DGLGAKNPQL YDRSLMRSST SSRCVGVAVE ERCIVGTRKA
0101: SCQNLLPSSH ILAKVFRKDG PSLGSEFDHL PSGARKASWL GTSSVGQQKQ KVARKRKISE LMDHTSQDCI QENATVMKHG IGKGLMTVWR VMNPNRRDVS
0201: PCVDLLDERA TLPQSSARNP PHQKKKQRQL ASILKQKLLQ KRSTEKKRRS IHREAELNKD ETQREFKENC ELAADGEVFK ETCQTISTLV DDEELEMRER
0301: HERGNPLTCS CHHPSSGSHG CFLCKDLLPK FPPNSVQMRM PFGLHPWNSS PESVKKLFKV VHFLYTYSVT LDIGPFTLDE FTRAFHDKDS LLLGKIHLSL
0401: LKLLLLDVET ELERGSFSNL SISCKFLALL QSVESQILIL DMWRNSLNSL TWTELLRQIL VAAGYGSLKC AVQSEELSKE RKLMKKYGLR LGTLKGELFR
0501: MLNGQGNNGL KISELADAPE VAVLNLATVP EERENSICST LASDITLFEK ISESTYRVRV NCFSEDPDKS QSDSDDSGSV DDESDDCSIS SGDEIEHVSE
0601: NPALRKVKCR KRRKHKSKMR EVCSEIDESH PGEPWLLGLM EGEYSDLSVE EKLDVFVALI DLLSSGSTIR MEDLPRAVAD CAPSIYSHGS GGKIKRSSSN
0701: QYSYPRGSWV HGGELYGIKA LSKSSDSHPV DSSSIVGAFA KLAGNRANNV HPMQSVYLGS DRRFNRYWLF LGTCNANDPG HRCVFFESSE DGHWEVINNK
0801: EALRALLSVL DDRGRREARL IESLEKRESF LCQAMLSRQV TQSETAHFTD IVREDSSSPV SDIDNNLCLN EIANDQFSSQ HAAIVFEIGS KREKSLLWSL
0901: IQEFDDWIWA NFNFNLNSVK HRRRSYLDSL TRCKSCHDLY WRDEKHCKIC HATFEVDIDL EERYAIHAAT CMRKEECDTF PDHKVLSSQL QSLKAAVYAI
1001: ESAMPEDALI GAWRKSAHRL WAKRLRRSSS VSEITQVIGD FVGAINEEWL WHCSDQGQTL MGEIINCFPS MPQTTSAIAL WLVKLDTLIA PYVEKAPPER
1101: DQPLCRTRNT SRRASKR
0101: SCQNLLPSSH ILAKVFRKDG PSLGSEFDHL PSGARKASWL GTSSVGQQKQ KVARKRKISE LMDHTSQDCI QENATVMKHG IGKGLMTVWR VMNPNRRDVS
0201: PCVDLLDERA TLPQSSARNP PHQKKKQRQL ASILKQKLLQ KRSTEKKRRS IHREAELNKD ETQREFKENC ELAADGEVFK ETCQTISTLV DDEELEMRER
0301: HERGNPLTCS CHHPSSGSHG CFLCKDLLPK FPPNSVQMRM PFGLHPWNSS PESVKKLFKV VHFLYTYSVT LDIGPFTLDE FTRAFHDKDS LLLGKIHLSL
0401: LKLLLLDVET ELERGSFSNL SISCKFLALL QSVESQILIL DMWRNSLNSL TWTELLRQIL VAAGYGSLKC AVQSEELSKE RKLMKKYGLR LGTLKGELFR
0501: MLNGQGNNGL KISELADAPE VAVLNLATVP EERENSICST LASDITLFEK ISESTYRVRV NCFSEDPDKS QSDSDDSGSV DDESDDCSIS SGDEIEHVSE
0601: NPALRKVKCR KRRKHKSKMR EVCSEIDESH PGEPWLLGLM EGEYSDLSVE EKLDVFVALI DLLSSGSTIR MEDLPRAVAD CAPSIYSHGS GGKIKRSSSN
0701: QYSYPRGSWV HGGELYGIKA LSKSSDSHPV DSSSIVGAFA KLAGNRANNV HPMQSVYLGS DRRFNRYWLF LGTCNANDPG HRCVFFESSE DGHWEVINNK
0801: EALRALLSVL DDRGRREARL IESLEKRESF LCQAMLSRQV TQSETAHFTD IVREDSSSPV SDIDNNLCLN EIANDQFSSQ HAAIVFEIGS KREKSLLWSL
0901: IQEFDDWIWA NFNFNLNSVK HRRRSYLDSL TRCKSCHDLY WRDEKHCKIC HATFEVDIDL EERYAIHAAT CMRKEECDTF PDHKVLSSQL QSLKAAVYAI
1001: ESAMPEDALI GAWRKSAHRL WAKRLRRSSS VSEITQVIGD FVGAINEEWL WHCSDQGQTL MGEIINCFPS MPQTTSAIAL WLVKLDTLIA PYVEKAPPER
1101: DQPLCRTRNT SRRASKR
Arabidopsis Description
Homeodomain-like transcriptional regulator [Source:TAIR;Acc:AT4G12750]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.