Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g006200.1.1 | Tomato | nucleus | 90.8 | 72.22 |
| CDX89461 | Canola | cytosol, endoplasmic reticulum | 28.64 | 51.04 |
| VIT_07s0005g06050.t01 | Wine grape | extracellular | 15.13 | 49.06 |
| GSMUA_Achr9P24830_001 | Banana | cytosol, nucleus, plasma membrane | 40.98 | 43.35 |
| KRH41406 | Soybean | nucleus | 51.34 | 40.8 |
| HORVU3Hr1G020400.11 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 35.16 | 40.37 |
| KRH60120 | Soybean | nucleus | 50.64 | 40.2 |
| VIT_19s0085g00350.t01 | Wine grape | nucleus | 55.3 | 40.08 |
| Bra014277.1-P | Field mustard | nucleus | 46.1 | 38.82 |
| CDY60841 | Canola | nucleus | 46.22 | 38.1 |
| CDY51255 | Canola | nucleus | 46.22 | 38.03 |
| TraesCS3A01G112300.2 | Wheat | nucleus | 45.63 | 36.06 |
| TraesCS2A01G124800.1 | Wheat | nucleus | 45.75 | 36.05 |
| AT4G12750.1 | Thale cress | nucleus | 46.68 | 35.9 |
| TraesCS2B01G147300.4 | Wheat | nucleus | 45.29 | 35.62 |
| TraesCS3B01G131700.9 | Wheat | nucleus | 45.4 | 35.39 |
| TraesCS2D01G127700.1 | Wheat | vacuole | 45.63 | 35.32 |
| TraesCS3D01G114300.2 | Wheat | nucleus | 45.05 | 33.77 |
| EER90701 | Sorghum | nucleus | 44.35 | 33.22 |
| HORVU2Hr1G021950.4 | Barley | nucleus, plastid | 45.4 | 32.83 |
| Zm00001d034515_P002 | Maize | nucleus | 44.82 | 32.68 |
| GSMUA_Achr6P22010_001 | Banana | nucleus | 37.49 | 31.08 |
| PGSC0003DMT400012008 | Potato | nucleus | 4.19 | 7.09 |
| PGSC0003DMT400080267 | Potato | nucleus | 4.07 | 6.85 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400002603 | EnsemblPlantsGene:PGSC0003DMG400000999 | InterPro:DDT_dom | InterPro:IPR018501 | InterPro:WHIM1_dom | InterPro:WHIM2_dom |
| PANTHER:PTHR10390 | PANTHER:PTHR10390:SF44 | PFAM:PF02791 | PFAM:PF15612 | PFAM:PF15613 | PFscan:PS50827 |
| PGSC:PGSC0003DMG400000999 | SEG:seg | SMART:SM00571 | UniParc:UPI0002965552 | UniProt:M0ZKD0 | MapMan:35.1 |
Description
Sequence-specific DNA binding / transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400000999]
Coordinates
chr11:-:6446664..6456549
Molecular Weight (calculated)
96254.4 Da
IEP (calculated)
5.678
GRAVY (calculated)
-0.278
Length
859 amino acids
Sequence
(BLAST)
(BLAST)
001: MPRKEKCELA LEWSKCQEGL PIKKRKCQHE FTQLGSLVDD EELELMEMEA GPNSLTCCTH FASNGLRGCS LCKGLLPKFP PNSVIMKLPL YERPWDSSPE
101: LAKKLFKVFH FLCTYAARID ICSFTIDEFA QAFHEKDSLI LGQVHLAFLR LLLADVEIQL NKGFIHQASR SCNFLGLVHS IEHEEFSLEL WISSLNALTW
201: TEILRQVLVA AGFGSKRGRV PGEALCKERS LMAKYGLTRG TLKGELFSIL LIKGTDGMKV HELAKLQSIL ELNLAATTIQ LEDLISSTLS SDITLFEKIS
301: SSGYRLRINP SSQESEICFS DSEGDDAEVI SGYIRDNSEC ESRELVRAES ERSYHQFENR NSLSTVNTEI DESYSGEAWL LGLMEGEYSD LGIEEKLNAL
401: VALVDLLVAA SSITEKDPMP SAVECAPATI HHASGGKIKR SSAKSSYLTG HAQSHNGQLS NQDPTVSLEL QPVDSSSVLM SKLCEKNKSP RTAKNAKELK
501: AGDELHPMQS IFLGSDRRYN RYWIFLGPCN ELDPGHRRIY FESSEDGHWE VIDTEESLCS LSAALDRRGI REALLVASLE KRETFLCQAM SNVLNDSGDS
601: QSPRCGRSFS REDSSSSAIS DVDNLSLVEV HNGSIGPKVP VGRKGEHQQD KWNIAQAFDT WIWKSFYCNL AAVKRGKRSY LDSLARCEQC HDLYWRDEKH
701: CRICHTTFEL DFDLEEKYAI HTATCRQNLD LDKLSKHKIL PSELQSLKAA IHAIESVMPE DALIGAWRRS SHNLWIKRLR RASTLSEILQ VLADFVTAIN
801: EDWLCESGHT LGLNYDPEEI IASFSSMPRT SSAVAFWLVK LDALIAPHLE SVPISTLQV
101: LAKKLFKVFH FLCTYAARID ICSFTIDEFA QAFHEKDSLI LGQVHLAFLR LLLADVEIQL NKGFIHQASR SCNFLGLVHS IEHEEFSLEL WISSLNALTW
201: TEILRQVLVA AGFGSKRGRV PGEALCKERS LMAKYGLTRG TLKGELFSIL LIKGTDGMKV HELAKLQSIL ELNLAATTIQ LEDLISSTLS SDITLFEKIS
301: SSGYRLRINP SSQESEICFS DSEGDDAEVI SGYIRDNSEC ESRELVRAES ERSYHQFENR NSLSTVNTEI DESYSGEAWL LGLMEGEYSD LGIEEKLNAL
401: VALVDLLVAA SSITEKDPMP SAVECAPATI HHASGGKIKR SSAKSSYLTG HAQSHNGQLS NQDPTVSLEL QPVDSSSVLM SKLCEKNKSP RTAKNAKELK
501: AGDELHPMQS IFLGSDRRYN RYWIFLGPCN ELDPGHRRIY FESSEDGHWE VIDTEESLCS LSAALDRRGI REALLVASLE KRETFLCQAM SNVLNDSGDS
601: QSPRCGRSFS REDSSSSAIS DVDNLSLVEV HNGSIGPKVP VGRKGEHQQD KWNIAQAFDT WIWKSFYCNL AAVKRGKRSY LDSLARCEQC HDLYWRDEKH
701: CRICHTTFEL DFDLEEKYAI HTATCRQNLD LDKLSKHKIL PSELQSLKAA IHAIESVMPE DALIGAWRRS SHNLWIKRLR RASTLSEILQ VLADFVTAIN
801: EDWLCESGHT LGLNYDPEEI IASFSSMPRT SSAVAFWLVK LDALIAPHLE SVPISTLQV
0001: MKRKSPLQVQ ALEGFYLEQM YPTPKEMEDL GKSLGLTLKE VRGWFKRRRS RGKGVKSMAN DGLGAKNPQL YDRSLMRSST SSRCVGVAVE ERCIVGTRKA
0101: SCQNLLPSSH ILAKVFRKDG PSLGSEFDHL PSGARKASWL GTSSVGQQKQ KVARKRKISE LMDHTSQDCI QENATVMKHG IGKGLMTVWR VMNPNRRDVS
0201: PCVDLLDERA TLPQSSARNP PHQKKKQRQL ASILKQKLLQ KRSTEKKRRS IHREAELNKD ETQREFKENC ELAADGEVFK ETCQTISTLV DDEELEMRER
0301: HERGNPLTCS CHHPSSGSHG CFLCKDLLPK FPPNSVQMRM PFGLHPWNSS PESVKKLFKV VHFLYTYSVT LDIGPFTLDE FTRAFHDKDS LLLGKIHLSL
0401: LKLLLLDVET ELERGSFSNL SISCKFLALL QSVESQILIL DMWRNSLNSL TWTELLRQIL VAAGYGSLKC AVQSEELSKE RKLMKKYGLR LGTLKGELFR
0501: MLNGQGNNGL KISELADAPE VAVLNLATVP EERENSICST LASDITLFEK ISESTYRVRV NCFSEDPDKS QSDSDDSGSV DDESDDCSIS SGDEIEHVSE
0601: NPALRKVKCR KRRKHKSKMR EVCSEIDESH PGEPWLLGLM EGEYSDLSVE EKLDVFVALI DLLSSGSTIR MEDLPRAVAD CAPSIYSHGS GGKIKRSSSN
0701: QYSYPRGSWV HGGELYGIKA LSKSSDSHPV DSSSIVGAFA KLAGNRANNV HPMQSVYLGS DRRFNRYWLF LGTCNANDPG HRCVFFESSE DGHWEVINNK
0801: EALRALLSVL DDRGRREARL IESLEKRESF LCQAMLSRQV TQSETAHFTD IVREDSSSPV SDIDNNLCLN EIANDQFSSQ HAAIVFEIGS KREKSLLWSL
0901: IQEFDDWIWA NFNFNLNSVK HRRRSYLDSL TRCKSCHDLY WRDEKHCKIC HATFEVDIDL EERYAIHAAT CMRKEECDTF PDHKVLSSQL QSLKAAVYAI
1001: ESAMPEDALI GAWRKSAHRL WAKRLRRSSS VSEITQVIGD FVGAINEEWL WHCSDQGQTL MGEIINCFPS MPQTTSAIAL WLVKLDTLIA PYVEKAPPER
1101: DQPLCRTRNT SRRASKR
0101: SCQNLLPSSH ILAKVFRKDG PSLGSEFDHL PSGARKASWL GTSSVGQQKQ KVARKRKISE LMDHTSQDCI QENATVMKHG IGKGLMTVWR VMNPNRRDVS
0201: PCVDLLDERA TLPQSSARNP PHQKKKQRQL ASILKQKLLQ KRSTEKKRRS IHREAELNKD ETQREFKENC ELAADGEVFK ETCQTISTLV DDEELEMRER
0301: HERGNPLTCS CHHPSSGSHG CFLCKDLLPK FPPNSVQMRM PFGLHPWNSS PESVKKLFKV VHFLYTYSVT LDIGPFTLDE FTRAFHDKDS LLLGKIHLSL
0401: LKLLLLDVET ELERGSFSNL SISCKFLALL QSVESQILIL DMWRNSLNSL TWTELLRQIL VAAGYGSLKC AVQSEELSKE RKLMKKYGLR LGTLKGELFR
0501: MLNGQGNNGL KISELADAPE VAVLNLATVP EERENSICST LASDITLFEK ISESTYRVRV NCFSEDPDKS QSDSDDSGSV DDESDDCSIS SGDEIEHVSE
0601: NPALRKVKCR KRRKHKSKMR EVCSEIDESH PGEPWLLGLM EGEYSDLSVE EKLDVFVALI DLLSSGSTIR MEDLPRAVAD CAPSIYSHGS GGKIKRSSSN
0701: QYSYPRGSWV HGGELYGIKA LSKSSDSHPV DSSSIVGAFA KLAGNRANNV HPMQSVYLGS DRRFNRYWLF LGTCNANDPG HRCVFFESSE DGHWEVINNK
0801: EALRALLSVL DDRGRREARL IESLEKRESF LCQAMLSRQV TQSETAHFTD IVREDSSSPV SDIDNNLCLN EIANDQFSSQ HAAIVFEIGS KREKSLLWSL
0901: IQEFDDWIWA NFNFNLNSVK HRRRSYLDSL TRCKSCHDLY WRDEKHCKIC HATFEVDIDL EERYAIHAAT CMRKEECDTF PDHKVLSSQL QSLKAAVYAI
1001: ESAMPEDALI GAWRKSAHRL WAKRLRRSSS VSEITQVIGD FVGAINEEWL WHCSDQGQTL MGEIINCFPS MPQTTSAIAL WLVKLDTLIA PYVEKAPPER
1101: DQPLCRTRNT SRRASKR
Arabidopsis Description
Homeodomain-like transcriptional regulator [Source:TAIR;Acc:AT4G12750]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.