Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G147300.4 | Wheat | nucleus | 97.52 | 97.34 |
| TraesCS2D01G127700.1 | Wheat | vacuole | 98.53 | 96.76 |
| TraesCS3A01G112300.2 | Wheat | nucleus | 94.13 | 94.39 |
| TraesCS3B01G131700.9 | Wheat | nucleus | 94.13 | 93.1 |
| HORVU2Hr1G021950.4 | Barley | nucleus, plastid | 95.78 | 87.88 |
| EER90701 | Sorghum | nucleus | 66.7 | 63.38 |
| Zm00001d034515_P002 | Maize | nucleus | 65.69 | 60.78 |
| GSMUA_Achr9P24830_001 | Banana | cytosol, nucleus, plasma membrane | 40.0 | 53.69 |
| VIT_07s0005g06050.t01 | Wine grape | extracellular | 11.28 | 46.42 |
| CDX89461 | Canola | cytosol, endoplasmic reticulum | 20.28 | 45.85 |
| PGSC0003DMT400002603 | Potato | cytosol | 36.05 | 45.75 |
| VIT_19s0085g00350.t01 | Wine grape | nucleus | 44.5 | 40.93 |
| KRH41406 | Soybean | nucleus | 40.28 | 40.61 |
| KRH60120 | Soybean | nucleus | 40.28 | 40.57 |
| GSMUA_Achr6P22010_001 | Banana | nucleus | 38.26 | 40.25 |
| AT4G12750.1 | Thale cress | nucleus | 40.92 | 39.93 |
| Solyc11g006200.1.1 | Tomato | nucleus | 38.9 | 39.26 |
| Bra014277.1-P | Field mustard | nucleus | 35.69 | 38.14 |
| CDY60841 | Canola | nucleus | 35.05 | 36.66 |
| CDY51255 | Canola | nucleus | 34.86 | 36.4 |
| TraesCS3A01G245700.2 | Wheat | nucleus | 24.04 | 14.13 |
| TraesCS1A01G395600.1 | Wheat | nucleus | 23.67 | 13.88 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:35.1 | InterPro:DDT_dom | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR018501 | PFAM:PF00046 |
| PFAM:PF02791 | PFAM:PF15612 | PFAM:PF15613 | PFscan:PS50071 | PFscan:PS50827 | PANTHER:PTHR10390 |
| PANTHER:PTHR10390:SF44 | SMART:SM00389 | SMART:SM00571 | SUPFAM:SSF46689 | EnsemblPlantsGene:TraesCS2A01G124800 | EnsemblPlants:TraesCS2A01G124800.1 |
| InterPro:WHIM1_dom | InterPro:WHIM2_dom | TIGR:cd00086 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr2A:-:73540341..73550142
Molecular Weight (calculated)
122215.0 Da
IEP (calculated)
7.409
GRAVY (calculated)
-0.532
Length
1090 amino acids
Sequence
(BLAST)
(BLAST)
0001: MMAKGFLAKS DNAGTKKSPL QIQMLESFYS EVQYPKPEDV TEYAASVGLT YNQVRIWFKE RRRKERRHME AAEVHMETQA SARSNWPRCS SSRSSNSSQS
0101: PMQDTTGHQS YQDQSVLKKR KIMSPTAQRS TLPFENNDPV RKHGKGKGLM TVWHAMYSQT AEIQDCSSFI DESGCLRSLR PFEDCGGKLA QRQTLPRKKV
0201: NKKSRPPPSK RKVPCGRATD LTEHPSVECH LSVDESESSE LRTEQATLVD DEELELSELQ AGPNPLRCSA HLSSTGRHGC PLCKDLLARF PPPSVRMKQP
0301: FPTKPWESSP EMVKKLFQVV RFVYTHFGSM DVHPFTFDEF AQAFHEKDSS LLGKVHVSLL KLLMLNTERS SGSVFVPRSS KDSRFLSFLN FVREQEFNVN
0401: FWIKSLNSLT WVEILRQVLV ASGFGSDHHM LNRNFFNKEK NQMVKYGLRP RTLKGELFAL LSKKGSGGLK VAELAKSPQI IGLNLSGASE VEQLIFSTLS
0501: SDITLFEKIA PSAYRLRVDP RIKGKEDPRS DTEDSGTVDD DRDASSSGDE SDGPQESYAE HESRIVRWRQ KNVHKNMNKC SEIDESYSGE RWLLGLMEGE
0601: YSDLSIDEKL DCLVALIDVV SGAGSVPRLE EPQSVLSSIQ RAQSHASGGK IKKCTRTIYQ SSDEYLNRPG SSHSFDSSMQ GQSGSLRSQD YIADSGANES
0701: PTGFAHQPQI VLLGSDRRYN NYWLFLGPCR ADDPGHRRVY FESSEDGHWE VIDSPQDLLS LLSVLDIRGT REAHLLASMK KRQSCLFEGM KKHLEDGCVV
0801: ALTASSDSSH SETSSGNRYS PKPSSGDGAS PLSDIDSASV PTYLAGNLQN ASSAIGIEVG RRSDEKMSKW ERLQALDKWI WTSFYSSLTA VKCGKRSFKE
0901: SLVHCDSCHD LYWRDEKHCR ICHSTFEVGF DLEERYAIHV ATCREPEDLY DVPNHKVLPS QLQALKAAIH AIEALMPTAA FAGLWMKSSH NLWVKRLRRT
1001: SSLPELLQVL VDFVGAIDED WLYQSSSAVS FSSYLDDITV YFQTMPQTTS AVALWVVKLD ALIAPHLAQA DSGRGLGKGF IQTRAQACLR
0101: PMQDTTGHQS YQDQSVLKKR KIMSPTAQRS TLPFENNDPV RKHGKGKGLM TVWHAMYSQT AEIQDCSSFI DESGCLRSLR PFEDCGGKLA QRQTLPRKKV
0201: NKKSRPPPSK RKVPCGRATD LTEHPSVECH LSVDESESSE LRTEQATLVD DEELELSELQ AGPNPLRCSA HLSSTGRHGC PLCKDLLARF PPPSVRMKQP
0301: FPTKPWESSP EMVKKLFQVV RFVYTHFGSM DVHPFTFDEF AQAFHEKDSS LLGKVHVSLL KLLMLNTERS SGSVFVPRSS KDSRFLSFLN FVREQEFNVN
0401: FWIKSLNSLT WVEILRQVLV ASGFGSDHHM LNRNFFNKEK NQMVKYGLRP RTLKGELFAL LSKKGSGGLK VAELAKSPQI IGLNLSGASE VEQLIFSTLS
0501: SDITLFEKIA PSAYRLRVDP RIKGKEDPRS DTEDSGTVDD DRDASSSGDE SDGPQESYAE HESRIVRWRQ KNVHKNMNKC SEIDESYSGE RWLLGLMEGE
0601: YSDLSIDEKL DCLVALIDVV SGAGSVPRLE EPQSVLSSIQ RAQSHASGGK IKKCTRTIYQ SSDEYLNRPG SSHSFDSSMQ GQSGSLRSQD YIADSGANES
0701: PTGFAHQPQI VLLGSDRRYN NYWLFLGPCR ADDPGHRRVY FESSEDGHWE VIDSPQDLLS LLSVLDIRGT REAHLLASMK KRQSCLFEGM KKHLEDGCVV
0801: ALTASSDSSH SETSSGNRYS PKPSSGDGAS PLSDIDSASV PTYLAGNLQN ASSAIGIEVG RRSDEKMSKW ERLQALDKWI WTSFYSSLTA VKCGKRSFKE
0901: SLVHCDSCHD LYWRDEKHCR ICHSTFEVGF DLEERYAIHV ATCREPEDLY DVPNHKVLPS QLQALKAAIH AIEALMPTAA FAGLWMKSSH NLWVKRLRRT
1001: SSLPELLQVL VDFVGAIDED WLYQSSSAVS FSSYLDDITV YFQTMPQTTS AVALWVVKLD ALIAPHLAQA DSGRGLGKGF IQTRAQACLR
0001: MKRKSPLQVQ ALEGFYLEQM YPTPKEMEDL GKSLGLTLKE VRGWFKRRRS RGKGVKSMAN DGLGAKNPQL YDRSLMRSST SSRCVGVAVE ERCIVGTRKA
0101: SCQNLLPSSH ILAKVFRKDG PSLGSEFDHL PSGARKASWL GTSSVGQQKQ KVARKRKISE LMDHTSQDCI QENATVMKHG IGKGLMTVWR VMNPNRRDVS
0201: PCVDLLDERA TLPQSSARNP PHQKKKQRQL ASILKQKLLQ KRSTEKKRRS IHREAELNKD ETQREFKENC ELAADGEVFK ETCQTISTLV DDEELEMRER
0301: HERGNPLTCS CHHPSSGSHG CFLCKDLLPK FPPNSVQMRM PFGLHPWNSS PESVKKLFKV VHFLYTYSVT LDIGPFTLDE FTRAFHDKDS LLLGKIHLSL
0401: LKLLLLDVET ELERGSFSNL SISCKFLALL QSVESQILIL DMWRNSLNSL TWTELLRQIL VAAGYGSLKC AVQSEELSKE RKLMKKYGLR LGTLKGELFR
0501: MLNGQGNNGL KISELADAPE VAVLNLATVP EERENSICST LASDITLFEK ISESTYRVRV NCFSEDPDKS QSDSDDSGSV DDESDDCSIS SGDEIEHVSE
0601: NPALRKVKCR KRRKHKSKMR EVCSEIDESH PGEPWLLGLM EGEYSDLSVE EKLDVFVALI DLLSSGSTIR MEDLPRAVAD CAPSIYSHGS GGKIKRSSSN
0701: QYSYPRGSWV HGGELYGIKA LSKSSDSHPV DSSSIVGAFA KLAGNRANNV HPMQSVYLGS DRRFNRYWLF LGTCNANDPG HRCVFFESSE DGHWEVINNK
0801: EALRALLSVL DDRGRREARL IESLEKRESF LCQAMLSRQV TQSETAHFTD IVREDSSSPV SDIDNNLCLN EIANDQFSSQ HAAIVFEIGS KREKSLLWSL
0901: IQEFDDWIWA NFNFNLNSVK HRRRSYLDSL TRCKSCHDLY WRDEKHCKIC HATFEVDIDL EERYAIHAAT CMRKEECDTF PDHKVLSSQL QSLKAAVYAI
1001: ESAMPEDALI GAWRKSAHRL WAKRLRRSSS VSEITQVIGD FVGAINEEWL WHCSDQGQTL MGEIINCFPS MPQTTSAIAL WLVKLDTLIA PYVEKAPPER
1101: DQPLCRTRNT SRRASKR
0101: SCQNLLPSSH ILAKVFRKDG PSLGSEFDHL PSGARKASWL GTSSVGQQKQ KVARKRKISE LMDHTSQDCI QENATVMKHG IGKGLMTVWR VMNPNRRDVS
0201: PCVDLLDERA TLPQSSARNP PHQKKKQRQL ASILKQKLLQ KRSTEKKRRS IHREAELNKD ETQREFKENC ELAADGEVFK ETCQTISTLV DDEELEMRER
0301: HERGNPLTCS CHHPSSGSHG CFLCKDLLPK FPPNSVQMRM PFGLHPWNSS PESVKKLFKV VHFLYTYSVT LDIGPFTLDE FTRAFHDKDS LLLGKIHLSL
0401: LKLLLLDVET ELERGSFSNL SISCKFLALL QSVESQILIL DMWRNSLNSL TWTELLRQIL VAAGYGSLKC AVQSEELSKE RKLMKKYGLR LGTLKGELFR
0501: MLNGQGNNGL KISELADAPE VAVLNLATVP EERENSICST LASDITLFEK ISESTYRVRV NCFSEDPDKS QSDSDDSGSV DDESDDCSIS SGDEIEHVSE
0601: NPALRKVKCR KRRKHKSKMR EVCSEIDESH PGEPWLLGLM EGEYSDLSVE EKLDVFVALI DLLSSGSTIR MEDLPRAVAD CAPSIYSHGS GGKIKRSSSN
0701: QYSYPRGSWV HGGELYGIKA LSKSSDSHPV DSSSIVGAFA KLAGNRANNV HPMQSVYLGS DRRFNRYWLF LGTCNANDPG HRCVFFESSE DGHWEVINNK
0801: EALRALLSVL DDRGRREARL IESLEKRESF LCQAMLSRQV TQSETAHFTD IVREDSSSPV SDIDNNLCLN EIANDQFSSQ HAAIVFEIGS KREKSLLWSL
0901: IQEFDDWIWA NFNFNLNSVK HRRRSYLDSL TRCKSCHDLY WRDEKHCKIC HATFEVDIDL EERYAIHAAT CMRKEECDTF PDHKVLSSQL QSLKAAVYAI
1001: ESAMPEDALI GAWRKSAHRL WAKRLRRSSS VSEITQVIGD FVGAINEEWL WHCSDQGQTL MGEIINCFPS MPQTTSAIAL WLVKLDTLIA PYVEKAPPER
1101: DQPLCRTRNT SRRASKR
Arabidopsis Description
Homeodomain-like transcriptional regulator [Source:TAIR;Acc:AT4G12750]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.