Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_07s0005g06050.t01 | Wine grape | extracellular | 19.07 | 85.28 |
| PGSC0003DMT400002603 | Potato | cytosol | 40.08 | 55.3 |
| CDX89461 | Canola | cytosol, endoplasmic reticulum | 22.45 | 55.19 |
| KRH41406 | Soybean | nucleus | 48.61 | 53.28 |
| KRH60120 | Soybean | nucleus | 48.44 | 53.05 |
| GSMUA_Achr9P24830_001 | Banana | cytosol, nucleus, plasma membrane | 35.78 | 52.22 |
| Solyc11g006200.1.1 | Tomato | nucleus | 44.89 | 49.26 |
| AT4G12750.1 | Thale cress | nucleus | 44.73 | 47.45 |
| Bra014277.1-P | Field mustard | nucleus | 40.17 | 46.67 |
| TraesCS3A01G112300.2 | Wheat | nucleus | 41.1 | 44.8 |
| CDY51255 | Canola | nucleus | 39.41 | 44.73 |
| TraesCS2B01G147300.4 | Wheat | nucleus | 41.18 | 44.69 |
| TraesCS2A01G124800.1 | Wheat | nucleus | 40.93 | 44.5 |
| CDY60841 | Canola | nucleus | 38.9 | 44.24 |
| HORVU3Hr1G020400.11 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 27.85 | 44.12 |
| TraesCS3B01G131700.9 | Wheat | nucleus | 40.84 | 43.92 |
| TraesCS3D01G114300.2 | Wheat | nucleus | 42.19 | 43.63 |
| TraesCS2D01G127700.1 | Wheat | vacuole | 40.84 | 43.6 |
| EER90701 | Sorghum | nucleus | 42.19 | 43.59 |
| Zm00001d034515_P002 | Maize | nucleus | 42.36 | 42.61 |
| GSMUA_Achr6P22010_001 | Banana | nucleus | 36.12 | 41.31 |
| HORVU2Hr1G021950.4 | Barley | nucleus, plastid | 41.01 | 40.91 |
| VIT_12s0028g03080.t01 | Wine grape | nucleus | 3.8 | 19.31 |
| VIT_10s0003g00290.t01 | Wine grape | nucleus | 10.89 | 18.07 |
| VIT_10s0003g00270.t01 | Wine grape | nucleus | 15.53 | 16.41 |
| VIT_12s0028g03090.t01 | Wine grape | nucleus | 20.25 | 15.75 |
| VIT_06s0009g03530.t01 | Wine grape | nucleus | 5.06 | 11.36 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100241125 | wikigene:100241125 | MapMan:35.1 | ProteinID:CCB49009 | ProteinID:CCB49009.1 |
| InterPro:DDT_dom | UniProt:F6H9W6 | EMBL:FN595503 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:Homeobox-like_sf |
| InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR018501 | EntrezGene:LOC100241125 | wikigene:LOC100241125 | PFAM:PF00046 |
| PFAM:PF02791 | PFAM:PF15612 | PFAM:PF15613 | PFscan:PS50071 | PFscan:PS50827 | PANTHER:PTHR10390 |
| PANTHER:PTHR10390:SF44 | SMART:SM00389 | SMART:SM00571 | SUPFAM:SSF46689 | UniParc:UPI0002109046 | ArrayExpress:VIT_19s0085g00350 |
| EnsemblPlantsGene:VIT_19s0085g00350 | EnsemblPlants:VIT_19s0085g00350.t01 | unigene:Vvi.8656 | InterPro:WHIM1_dom | InterPro:WHIM2_dom | RefSeq:XP_002263797 |
| RefSeq:XP_002263797.2 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr19:+:22688699..22720160
Molecular Weight (calculated)
133192.0 Da
IEP (calculated)
8.304
GRAVY (calculated)
-0.501
Length
1185 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGTNEVAIIE DHGTINTNTN SIRRKTPLQL KTLESLYSED NYPTQRVMKD YAAALGLTYK QVRGWFFERR RKEKNENGMG VSSSKKLVRA KNGIGVVAAK
0101: KIIRRVGLAA HCRGNMSSSS TYNRACLGAH HWHCFRNHDS RAVERGKILN EDLSTTDYIL KKVFRKDGPP LGVEFDSLPS SSFCHCTDSR NSHRTCQENQ
0201: TSSKRRKVVV SKPAVLHQQF CNNKSAPAKI HGIGKGLMTV WRATNPGAGD FPTGIDFADG QVAAVSPTST SILRKSLIKK KKPRKQSSVT KWKSVGGKLN
0301: DKKKPSRKRG KVECNKDVNQ KKPNKEKCEL ALEEGKSQEH LDQFAMLMDD EELELQESQA GPNPVTCSAH FATNGLHGCS LCKDLLAKFP PNAVKMKQPF
0401: CMQPWDSSPE LVKKMFKVLH FLYTYSVVVD VCPFTLDEFA QAFHDEDSLL LGKVHLALLN LLLSDVETEL SSGFLPHVIK NCKFLGLLQS VGQNEFVLKF
0501: WKRSLNPLTW TEILRQVLVA AGFGSRKGTL RREALDKELN PMVKYGLRPG TLKGELFSIL SNQGNNGMKV PDLARCVQIS ELNLAGTTDE LELLIYSTLS
0601: SDITLYEKIS SSSYRLRITS HTNEAENFQS DTDDSGSIDD DSKDSRKYSS SDDSDSDSGT SNLGKLNYMN HHKQRNGMLT IYTEIDESNP GEVWLLGLME
0701: GEYSDLSIEE KLNALMALVD LVSGGSSIRM EDLTKAVVEY VPNIHHYGSG AKIKRSYTKQ HNLPTPARGH FGQMLGGKEI NPSSELCPVD SSTSISKFHG
0801: KEKFSSKRKE TREAEVGLDL HPMQSVFLGP DRRYNRYWLF LGPCNANDPG HKRVYFESSE DGHWEVIDTE EAFCALLSVL DGRGKREAFL LASLEKRKAS
0901: LCQEMSSRIA IHSGSTSLTQ YDRSDLYMIR EDSSSPVSDI VDNPCATDIT NDFLASSGAI VLGVGKKGEE QKQRWRRLQE FDAWIWSSFY SDLNAVKHGK
1001: RTYLDSLARC ESCHDLYWRD EKHCKTCHTT FELDFDLEEK YAIHIATCRE KEDNDMFPKH KVLSSQLQSL KAAIHAIESV MPEDALVEAW SKSAHKLWVR
1101: RLRRTSYLTE LLQVLADFVG AIKEDWLCQS DVVLGSNNLL EEIVVSFSTM PQTSSAVALW LVKLDALIAP HLERVQLHSK KRTRN
0101: KIIRRVGLAA HCRGNMSSSS TYNRACLGAH HWHCFRNHDS RAVERGKILN EDLSTTDYIL KKVFRKDGPP LGVEFDSLPS SSFCHCTDSR NSHRTCQENQ
0201: TSSKRRKVVV SKPAVLHQQF CNNKSAPAKI HGIGKGLMTV WRATNPGAGD FPTGIDFADG QVAAVSPTST SILRKSLIKK KKPRKQSSVT KWKSVGGKLN
0301: DKKKPSRKRG KVECNKDVNQ KKPNKEKCEL ALEEGKSQEH LDQFAMLMDD EELELQESQA GPNPVTCSAH FATNGLHGCS LCKDLLAKFP PNAVKMKQPF
0401: CMQPWDSSPE LVKKMFKVLH FLYTYSVVVD VCPFTLDEFA QAFHDEDSLL LGKVHLALLN LLLSDVETEL SSGFLPHVIK NCKFLGLLQS VGQNEFVLKF
0501: WKRSLNPLTW TEILRQVLVA AGFGSRKGTL RREALDKELN PMVKYGLRPG TLKGELFSIL SNQGNNGMKV PDLARCVQIS ELNLAGTTDE LELLIYSTLS
0601: SDITLYEKIS SSSYRLRITS HTNEAENFQS DTDDSGSIDD DSKDSRKYSS SDDSDSDSGT SNLGKLNYMN HHKQRNGMLT IYTEIDESNP GEVWLLGLME
0701: GEYSDLSIEE KLNALMALVD LVSGGSSIRM EDLTKAVVEY VPNIHHYGSG AKIKRSYTKQ HNLPTPARGH FGQMLGGKEI NPSSELCPVD SSTSISKFHG
0801: KEKFSSKRKE TREAEVGLDL HPMQSVFLGP DRRYNRYWLF LGPCNANDPG HKRVYFESSE DGHWEVIDTE EAFCALLSVL DGRGKREAFL LASLEKRKAS
0901: LCQEMSSRIA IHSGSTSLTQ YDRSDLYMIR EDSSSPVSDI VDNPCATDIT NDFLASSGAI VLGVGKKGEE QKQRWRRLQE FDAWIWSSFY SDLNAVKHGK
1001: RTYLDSLARC ESCHDLYWRD EKHCKTCHTT FELDFDLEEK YAIHIATCRE KEDNDMFPKH KVLSSQLQSL KAAIHAIESV MPEDALVEAW SKSAHKLWVR
1101: RLRRTSYLTE LLQVLADFVG AIKEDWLCQS DVVLGSNNLL EEIVVSFSTM PQTSSAVALW LVKLDALIAP HLERVQLHSK KRTRN
0001: MKRKSPLQVQ ALEGFYLEQM YPTPKEMEDL GKSLGLTLKE VRGWFKRRRS RGKGVKSMAN DGLGAKNPQL YDRSLMRSST SSRCVGVAVE ERCIVGTRKA
0101: SCQNLLPSSH ILAKVFRKDG PSLGSEFDHL PSGARKASWL GTSSVGQQKQ KVARKRKISE LMDHTSQDCI QENATVMKHG IGKGLMTVWR VMNPNRRDVS
0201: PCVDLLDERA TLPQSSARNP PHQKKKQRQL ASILKQKLLQ KRSTEKKRRS IHREAELNKD ETQREFKENC ELAADGEVFK ETCQTISTLV DDEELEMRER
0301: HERGNPLTCS CHHPSSGSHG CFLCKDLLPK FPPNSVQMRM PFGLHPWNSS PESVKKLFKV VHFLYTYSVT LDIGPFTLDE FTRAFHDKDS LLLGKIHLSL
0401: LKLLLLDVET ELERGSFSNL SISCKFLALL QSVESQILIL DMWRNSLNSL TWTELLRQIL VAAGYGSLKC AVQSEELSKE RKLMKKYGLR LGTLKGELFR
0501: MLNGQGNNGL KISELADAPE VAVLNLATVP EERENSICST LASDITLFEK ISESTYRVRV NCFSEDPDKS QSDSDDSGSV DDESDDCSIS SGDEIEHVSE
0601: NPALRKVKCR KRRKHKSKMR EVCSEIDESH PGEPWLLGLM EGEYSDLSVE EKLDVFVALI DLLSSGSTIR MEDLPRAVAD CAPSIYSHGS GGKIKRSSSN
0701: QYSYPRGSWV HGGELYGIKA LSKSSDSHPV DSSSIVGAFA KLAGNRANNV HPMQSVYLGS DRRFNRYWLF LGTCNANDPG HRCVFFESSE DGHWEVINNK
0801: EALRALLSVL DDRGRREARL IESLEKRESF LCQAMLSRQV TQSETAHFTD IVREDSSSPV SDIDNNLCLN EIANDQFSSQ HAAIVFEIGS KREKSLLWSL
0901: IQEFDDWIWA NFNFNLNSVK HRRRSYLDSL TRCKSCHDLY WRDEKHCKIC HATFEVDIDL EERYAIHAAT CMRKEECDTF PDHKVLSSQL QSLKAAVYAI
1001: ESAMPEDALI GAWRKSAHRL WAKRLRRSSS VSEITQVIGD FVGAINEEWL WHCSDQGQTL MGEIINCFPS MPQTTSAIAL WLVKLDTLIA PYVEKAPPER
1101: DQPLCRTRNT SRRASKR
0101: SCQNLLPSSH ILAKVFRKDG PSLGSEFDHL PSGARKASWL GTSSVGQQKQ KVARKRKISE LMDHTSQDCI QENATVMKHG IGKGLMTVWR VMNPNRRDVS
0201: PCVDLLDERA TLPQSSARNP PHQKKKQRQL ASILKQKLLQ KRSTEKKRRS IHREAELNKD ETQREFKENC ELAADGEVFK ETCQTISTLV DDEELEMRER
0301: HERGNPLTCS CHHPSSGSHG CFLCKDLLPK FPPNSVQMRM PFGLHPWNSS PESVKKLFKV VHFLYTYSVT LDIGPFTLDE FTRAFHDKDS LLLGKIHLSL
0401: LKLLLLDVET ELERGSFSNL SISCKFLALL QSVESQILIL DMWRNSLNSL TWTELLRQIL VAAGYGSLKC AVQSEELSKE RKLMKKYGLR LGTLKGELFR
0501: MLNGQGNNGL KISELADAPE VAVLNLATVP EERENSICST LASDITLFEK ISESTYRVRV NCFSEDPDKS QSDSDDSGSV DDESDDCSIS SGDEIEHVSE
0601: NPALRKVKCR KRRKHKSKMR EVCSEIDESH PGEPWLLGLM EGEYSDLSVE EKLDVFVALI DLLSSGSTIR MEDLPRAVAD CAPSIYSHGS GGKIKRSSSN
0701: QYSYPRGSWV HGGELYGIKA LSKSSDSHPV DSSSIVGAFA KLAGNRANNV HPMQSVYLGS DRRFNRYWLF LGTCNANDPG HRCVFFESSE DGHWEVINNK
0801: EALRALLSVL DDRGRREARL IESLEKRESF LCQAMLSRQV TQSETAHFTD IVREDSSSPV SDIDNNLCLN EIANDQFSSQ HAAIVFEIGS KREKSLLWSL
0901: IQEFDDWIWA NFNFNLNSVK HRRRSYLDSL TRCKSCHDLY WRDEKHCKIC HATFEVDIDL EERYAIHAAT CMRKEECDTF PDHKVLSSQL QSLKAAVYAI
1001: ESAMPEDALI GAWRKSAHRL WAKRLRRSSS VSEITQVIGD FVGAINEEWL WHCSDQGQTL MGEIINCFPS MPQTTSAIAL WLVKLDTLIA PYVEKAPPER
1101: DQPLCRTRNT SRRASKR
Arabidopsis Description
Homeodomain-like transcriptional regulator [Source:TAIR;Acc:AT4G12750]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.