Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032908.1-P | Field mustard | nucleus | 99.7 | 99.88 |
| CDY65661 | Canola | nucleus | 95.26 | 94.86 |
| CDY35748 | Canola | nucleus | 76.1 | 81.85 |
| CDX90154 | Canola | nucleus | 77.24 | 81.75 |
| AT1G28420.1 | Thale cress | nucleus | 78.74 | 76.89 |
| KRH21359 | Soybean | nucleus | 47.69 | 45.24 |
| KRH50116 | Soybean | nucleus | 47.45 | 44.33 |
| KRH20389 | Soybean | nucleus | 47.39 | 43.93 |
| Solyc02g077660.2.1 | Tomato | nucleus | 43.12 | 42.79 |
| Os05t0562400-01 | Rice | nucleus | 34.71 | 41.37 |
| Zm00001d043915_P002 | Maize | nucleus | 31.53 | 41.31 |
| CDY22305 | Canola | nucleus | 38.86 | 39.48 |
| CDX94760 | Canola | nucleus | 38.74 | 38.72 |
| GSMUA_Achr9P06610_001 | Banana | nucleus | 41.02 | 38.52 |
| VIT_10s0003g00270.t01 | Wine grape | nucleus | 25.89 | 38.45 |
| Zm00001d039002_P019 | Maize | nucleus, plastid | 41.2 | 37.45 |
| GSMUA_Achr8P27210_001 | Banana | nucleus | 42.76 | 37.3 |
| KXG33081 | Sorghum | nucleus | 40.66 | 36.75 |
| KXG33083 | Sorghum | nucleus | 40.12 | 36.64 |
| HORVU1Hr1G087180.1 | Barley | nucleus | 40.84 | 36.62 |
| TraesCS1D01G403700.1 | Wheat | nucleus | 40.72 | 36.61 |
| HORVU3Hr1G061660.1 | Barley | nucleus | 40.48 | 36.55 |
| TraesCS3D01G245800.2 | Wheat | nucleus | 40.66 | 36.5 |
| TraesCS3B01G273900.1 | Wheat | nucleus | 40.54 | 36.49 |
| TraesCS3A01G245700.2 | Wheat | nucleus | 40.6 | 36.46 |
| TraesCS1B01G424100.1 | Wheat | nucleus | 40.72 | 36.39 |
| Zm00001d009562_P007 | Maize | nucleus, plastid | 40.78 | 36.17 |
| TraesCS1A01G395600.1 | Wheat | nucleus | 40.36 | 36.15 |
| Zm00001d011560_P012 | Maize | nucleus | 39.4 | 35.25 |
| GSMUA_Achr6P26980_001 | Banana | nucleus | 41.62 | 30.88 |
| CDX89461 | Canola | cytosol, endoplasmic reticulum | 7.45 | 25.73 |
| Zm00001d043914_P001 | Maize | nucleus | 8.17 | 24.16 |
| OQU75646 | Sorghum | cytosol | 8.23 | 23.74 |
| CDY60841 | Canola | nucleus | 14.47 | 23.13 |
| CDY51255 | Canola | nucleus | 14.47 | 23.08 |
| CDY22114 | Canola | nucleus | 6.19 | 21.68 |
| CDY21949 | Canola | nucleus | 5.95 | 20.67 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.7 | GO:A0A078H9E7 | UniProt:A0A078H9E7 | EnsemblPlants:CDY34099 | ProteinID:CDY34099 |
| ProteinID:CDY34099.1 | ncoils:Coil | InterPro:DDT_dom | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:GSBRNA2T00056030001 | InterPro:HB1/Asxl_HTH | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR018501 |
| PFAM:PF00046 | PFAM:PF02791 | PFAM:PF05066 | PFAM:PF15612 | PFAM:PF15613 | PFscan:PS50071 |
| PFscan:PS50827 | PANTHER:PTHR36968 | PANTHER:PTHR36968:SF6 | SMART:SM00389 | SMART:SM00571 | SUPFAM:SSF46689 |
| UniParc:UPI0004EE49A7 | InterPro:WHIM1_dom | InterPro:WHIM2_dom | SEG:seg | : | : |
Description
BnaA09g27250DBnaA09g27250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H9E7]
Coordinates
chrLK032328:-:316709..324222
Molecular Weight (calculated)
186662.0 Da
IEP (calculated)
5.066
GRAVY (calculated)
-0.803
Length
1665 amino acids
Sequence
(BLAST)
(BLAST)
0001: MESDGEENQM RSVADSNHKN KKMKKVVDAS NSKDSPSSKP KRQMKTPFQL QTLEQVYSAE ETYPSEATRA ELSEKLDLSD RQLQMWFCHR RLKDKKDGQV
0101: KKTPKPAPVQ PASAVPALSL PAAELDSGSD SGSGSGSGSG CSPYSEPRRE FASGSSNSRA EYETMGSAGY EQPPPRSSVM VRRAVACIEA QLGEPLRDDG
0201: PTLGMEFDPL PPGAFGTPIA MQTHQGHPYE SKMYEPLDVR PRRSQAATSA FHEQQSLNDP SSFTPDMYGR YSESHSRGVD YEISRPRSSS FMQGNGPLPK
0301: SYGNSSRNCS TSQQDMPSPI LPSARGDSFL LERDSSGLRA EDPYLLSDGV RMSNDVHRKG KINDGRLGRG SGQKDLEKLE LQRKRNEERM RKEMERYERE
0401: RRKEEERLMR ERIKEEERLQ REQRREMERR EKFLQRENER AEKNKQKEEI RREKEAIRRK IAVEKATARR IAKEAMDLIE DEQLELMDLA ASSKGLSSVI
0501: QLDHDTLQNL DLYRDSLSTF PPKALQLKMP FTISPWKDSK ENVGNLLMVW RFLISFSDVL DLWPFTLDEF IQALHEYDSR LLGEIHITLL RSIIRDIEDV
0601: ARTPYSGIGN NQYTTANPEG GHPQIVEGAY AWGFDIRSWK KHLNPLTWPE ILRQLGLSSG FGPRLKKSNS RVTHTGEKDE AKGCEDIIST LRSGSAAESA
0701: FASMLEKGLL APRKSRHRLT PGTVKFAAFH VLSLEGSKGL TVIELADKIQ KSGLRDLRTS KTPEASISVA LTRDVKLFER IAPSTYCVRA PYVKDPADGE
0801: AILAEARKKI KAFENGLAGP EDVNDLEKDE DFECDIDEDP EVDDLATLPS ASKSADLGDA NGLSEKGGEI MFSDVKADVK SEVEKGVSSP PTSSMKSIVP
0901: QCHSEQRKDN AVVEDSKQGK SWVLGLTEGE YCHLSVEERL EALVALVGIA NEGNSIRASL EDRLEAANSL KKQMWAEAQL DNSCMRDVLK FDIQNSTREI
1001: NSFNRDPSQL VDETKPPLEV VSNDVHKLST ERGSVNQEGN ISQENFSSKR SRSQLKSYIS HKAEEVYPYR SLPLGQDRRH NRYWHFAASA SKSDPCSGLI
1101: FVELHDSKWR LIDSAEAFDT LVASLDMRGV RESHLRIMLQ KIEGAFKENA SKNINLARNP SLKEDSVSPS SAILGLSSDS MGASTSIRVE LGRDDKEKEN
1201: FLKRFHAFQR WMWTETYSSV PSCARKDGKK RCELLATCEV CIASYLSEYT HCISCHQRLD MADGSERKIV DSGLTASPLP FGVRLLKALL VFLEASVPDE
1301: AFESFWTEEK RKNWGLKLNA SSSPEELSQV LTYLESAIKK ESLSSNFLSA KELLGAAGAD DQESMDVFPW IPKTVSAVAL RLSDLDASIV YVKPEKPEPV
1401: PEDENEQISL FPGNSLLKGK GPKEQEDQDE VVPNSGKKSN KRRVIFGSGS NKKAKKKKVQ GGNGRFVAGR SNVAASRNIM SVELNHQVPG RGKRTVRKRP
1501: ERNDEDNYRL VSRMADIVKP TSEEDEEEEE EQTFRGIDED WAGETPREMD EEWASETPNR VMTPMQVDGE SDDNSVGVQS EDDDDDEGQF VSYSQRNKWG
1601: FDWNSNPNEA MEDVEEEVAG VEQVQREYVA EMSESSEDDD VPAANNNAAA NNYDRESEDY SSSDS
0101: KKTPKPAPVQ PASAVPALSL PAAELDSGSD SGSGSGSGSG CSPYSEPRRE FASGSSNSRA EYETMGSAGY EQPPPRSSVM VRRAVACIEA QLGEPLRDDG
0201: PTLGMEFDPL PPGAFGTPIA MQTHQGHPYE SKMYEPLDVR PRRSQAATSA FHEQQSLNDP SSFTPDMYGR YSESHSRGVD YEISRPRSSS FMQGNGPLPK
0301: SYGNSSRNCS TSQQDMPSPI LPSARGDSFL LERDSSGLRA EDPYLLSDGV RMSNDVHRKG KINDGRLGRG SGQKDLEKLE LQRKRNEERM RKEMERYERE
0401: RRKEEERLMR ERIKEEERLQ REQRREMERR EKFLQRENER AEKNKQKEEI RREKEAIRRK IAVEKATARR IAKEAMDLIE DEQLELMDLA ASSKGLSSVI
0501: QLDHDTLQNL DLYRDSLSTF PPKALQLKMP FTISPWKDSK ENVGNLLMVW RFLISFSDVL DLWPFTLDEF IQALHEYDSR LLGEIHITLL RSIIRDIEDV
0601: ARTPYSGIGN NQYTTANPEG GHPQIVEGAY AWGFDIRSWK KHLNPLTWPE ILRQLGLSSG FGPRLKKSNS RVTHTGEKDE AKGCEDIIST LRSGSAAESA
0701: FASMLEKGLL APRKSRHRLT PGTVKFAAFH VLSLEGSKGL TVIELADKIQ KSGLRDLRTS KTPEASISVA LTRDVKLFER IAPSTYCVRA PYVKDPADGE
0801: AILAEARKKI KAFENGLAGP EDVNDLEKDE DFECDIDEDP EVDDLATLPS ASKSADLGDA NGLSEKGGEI MFSDVKADVK SEVEKGVSSP PTSSMKSIVP
0901: QCHSEQRKDN AVVEDSKQGK SWVLGLTEGE YCHLSVEERL EALVALVGIA NEGNSIRASL EDRLEAANSL KKQMWAEAQL DNSCMRDVLK FDIQNSTREI
1001: NSFNRDPSQL VDETKPPLEV VSNDVHKLST ERGSVNQEGN ISQENFSSKR SRSQLKSYIS HKAEEVYPYR SLPLGQDRRH NRYWHFAASA SKSDPCSGLI
1101: FVELHDSKWR LIDSAEAFDT LVASLDMRGV RESHLRIMLQ KIEGAFKENA SKNINLARNP SLKEDSVSPS SAILGLSSDS MGASTSIRVE LGRDDKEKEN
1201: FLKRFHAFQR WMWTETYSSV PSCARKDGKK RCELLATCEV CIASYLSEYT HCISCHQRLD MADGSERKIV DSGLTASPLP FGVRLLKALL VFLEASVPDE
1301: AFESFWTEEK RKNWGLKLNA SSSPEELSQV LTYLESAIKK ESLSSNFLSA KELLGAAGAD DQESMDVFPW IPKTVSAVAL RLSDLDASIV YVKPEKPEPV
1401: PEDENEQISL FPGNSLLKGK GPKEQEDQDE VVPNSGKKSN KRRVIFGSGS NKKAKKKKVQ GGNGRFVAGR SNVAASRNIM SVELNHQVPG RGKRTVRKRP
1501: ERNDEDNYRL VSRMADIVKP TSEEDEEEEE EQTFRGIDED WAGETPREMD EEWASETPNR VMTPMQVDGE SDDNSVGVQS EDDDDDEGQF VSYSQRNKWG
1601: FDWNSNPNEA MEDVEEEVAG VEQVQREYVA EMSESSEDDD VPAANNNAAA NNYDRESEDY SSSDS
0001: MEMGSDGEDQ KIRSVVGDAN LNNKKKKIDN NSSSKDGRVK PKRQMKTPFQ LETLEKVYSE EKYPSEATRA ELSEKLDLSD RQLQMWFCHR RLKDKKDGQS
0101: NKPVKSSVAA VQSASVNELP AAAGSVPEQD SRSDSGSESG CSPYSNSRRN FASGSSSSRA ELDEYETMGK PSYESRLSTM VHRAIVCIEA QLGEPLRDDG
0201: PILGMEFDPL PPGAFGTPIA MQKHLLHPYE SDLYERHDPR PRRSHAAARS FHEQQSLDDP SSFTPNMYER YSENHARGMD YEVARSRISS FMHANGPVPR
0301: SYVTPGHASR NCSTSQQDMP SPIESAHHGD RFLLEKDSSV LGTEDPYLLP DGVRKSSDVH RKGKINDGRL GRGSETRENH GPKDLEKLEI QRKKNEERMR
0401: KEMERNERER RKEEERLMRE RIKEEERLQR EQRREVERRE KFLQRENERA EKKKQKDEIR REKDAIRRKL AIEKATARRI AKESMDLIED EQLELMELAA
0501: ISKGLPSVLQ LDHDTLQNLE VYRDSLSTFP PKSLQLKMPF AISPWKDSDE TVGNLLMVWR FLISFSDVLD LWPFTLDEFI QAFHDYDSRL LGEIHVTLLR
0601: SIIRDVEDVA RTPFSGIGNN QYTTANPEGG HPQIVEGAYA WGFDIRSWKK HLNPLTWPEI LRQLALSAGF GPKLKKKHSR LTNTGDKDEA KGCEDVISTI
0701: RNGTAAESAF ASMREKGLLA PRKSRHRLTP GTVKFAAFHV LSLEGSKGLT VLELADKIQK SGLRDLTTSK TPEASISVAL TRDVKLFERI APSTYCVRAP
0801: YVKDPKDGEA ILADARKKIR AFENGFTGPE DVNDLERDED FEIDIDEDPE VDDLATLASA SKSAVLGEAN VLSGKGVDTM FCDVKADVKS ELEKEFSSPP
0901: PSTMKSIVPQ HSERHKNTVV GGVDAVIDES NQGQSWIQGL TEGDYCHLSV EERLNALVAL VGIANEGNSI RTGLEDRMEA ANALKKQMWA EAQLDNSCMR
1001: DVLKLDLQNL ASSKTESTIG LPIIQSSTRE RDSFDRDPSQ LLDETKPLED LSNDLHKSSA ERALINQDAN ISQENYASKR SRSQLKSYIG HKAEEVYPYR
1101: SLPLGQDRRH NRYWHFAVSV SKSDPCSRLL FVELHDGKWL LIDSEEAFDI LVASLDMRGI RESHLRIMLQ KIEGSFKENA CKDIKLARNP FLTEKSVVNH
1201: SPTDSVSPSS SAISGSNSDS METSTSIRVD LGRNDTENKN LSKRFHDFQR WMWTETYSSL PSCARKYGKK RSELLATCDA CVASYLSEYT FCSSCHQRLD
1301: VVDSSEILDS GLAVSPLPFG VRLLKPLLVF LEASVPDEAL ESFWTEDQRK KWGFRLNTSS SPGELLQVLT SLESAIKKES LSSNFMSAKE LLGAANAEAD
1401: DQGSVDVLPW IPKTVSAVAL RLSELDASII YVKPEKPEVI PEDENEQISL FPRDSPFKGK GPREQEDQDE VAPNPGNRNK KRARVSLGSG SNRKVKRKKA
1501: QSGLNKFVVG RRNVAVNSNL MAVELNHQVP GKGKRTVRKR PERIDEDNSH LVNRMANIVR PKSEEVEEDE EEEEQTFRDI NEDWAAGETP REMEEDWANE
1601: TPNRMMTPMQ VDDESDNSVG VESEDEDGGG QFVDYSQRNK WGLDWNSNLN VAIEEDEEEE VVGVGRVEGE DDAEMSESSE DDDVPANNAA NNYDRESEGY
1701: SSSDS
0101: NKPVKSSVAA VQSASVNELP AAAGSVPEQD SRSDSGSESG CSPYSNSRRN FASGSSSSRA ELDEYETMGK PSYESRLSTM VHRAIVCIEA QLGEPLRDDG
0201: PILGMEFDPL PPGAFGTPIA MQKHLLHPYE SDLYERHDPR PRRSHAAARS FHEQQSLDDP SSFTPNMYER YSENHARGMD YEVARSRISS FMHANGPVPR
0301: SYVTPGHASR NCSTSQQDMP SPIESAHHGD RFLLEKDSSV LGTEDPYLLP DGVRKSSDVH RKGKINDGRL GRGSETRENH GPKDLEKLEI QRKKNEERMR
0401: KEMERNERER RKEEERLMRE RIKEEERLQR EQRREVERRE KFLQRENERA EKKKQKDEIR REKDAIRRKL AIEKATARRI AKESMDLIED EQLELMELAA
0501: ISKGLPSVLQ LDHDTLQNLE VYRDSLSTFP PKSLQLKMPF AISPWKDSDE TVGNLLMVWR FLISFSDVLD LWPFTLDEFI QAFHDYDSRL LGEIHVTLLR
0601: SIIRDVEDVA RTPFSGIGNN QYTTANPEGG HPQIVEGAYA WGFDIRSWKK HLNPLTWPEI LRQLALSAGF GPKLKKKHSR LTNTGDKDEA KGCEDVISTI
0701: RNGTAAESAF ASMREKGLLA PRKSRHRLTP GTVKFAAFHV LSLEGSKGLT VLELADKIQK SGLRDLTTSK TPEASISVAL TRDVKLFERI APSTYCVRAP
0801: YVKDPKDGEA ILADARKKIR AFENGFTGPE DVNDLERDED FEIDIDEDPE VDDLATLASA SKSAVLGEAN VLSGKGVDTM FCDVKADVKS ELEKEFSSPP
0901: PSTMKSIVPQ HSERHKNTVV GGVDAVIDES NQGQSWIQGL TEGDYCHLSV EERLNALVAL VGIANEGNSI RTGLEDRMEA ANALKKQMWA EAQLDNSCMR
1001: DVLKLDLQNL ASSKTESTIG LPIIQSSTRE RDSFDRDPSQ LLDETKPLED LSNDLHKSSA ERALINQDAN ISQENYASKR SRSQLKSYIG HKAEEVYPYR
1101: SLPLGQDRRH NRYWHFAVSV SKSDPCSRLL FVELHDGKWL LIDSEEAFDI LVASLDMRGI RESHLRIMLQ KIEGSFKENA CKDIKLARNP FLTEKSVVNH
1201: SPTDSVSPSS SAISGSNSDS METSTSIRVD LGRNDTENKN LSKRFHDFQR WMWTETYSSL PSCARKYGKK RSELLATCDA CVASYLSEYT FCSSCHQRLD
1301: VVDSSEILDS GLAVSPLPFG VRLLKPLLVF LEASVPDEAL ESFWTEDQRK KWGFRLNTSS SPGELLQVLT SLESAIKKES LSSNFMSAKE LLGAANAEAD
1401: DQGSVDVLPW IPKTVSAVAL RLSELDASII YVKPEKPEVI PEDENEQISL FPRDSPFKGK GPREQEDQDE VAPNPGNRNK KRARVSLGSG SNRKVKRKKA
1501: QSGLNKFVVG RRNVAVNSNL MAVELNHQVP GKGKRTVRKR PERIDEDNSH LVNRMANIVR PKSEEVEEDE EEEEQTFRDI NEDWAAGETP REMEEDWANE
1601: TPNRMMTPMQ VDDESDNSVG VESEDEDGGG QFVDYSQRNK WGLDWNSNLN VAIEEDEEEE VVGVGRVEGE DDAEMSESSE DDDVPANNAA NNYDRESEGY
1701: SSSDS
Arabidopsis Description
RLT1Homeobox-DDT domain protein RLT1 [Source:UniProtKB/Swiss-Prot;Acc:F4HY56]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.