Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH50116 | Soybean | nucleus | 74.47 | 73.34 |
| KRH20389 | Soybean | nucleus | 74.64 | 72.94 |
| VIT_10s0003g00270.t01 | Wine grape | nucleus | 31.17 | 48.8 |
| CDY35748 | Canola | nucleus | 43.02 | 48.77 |
| Bra010869.1-P | Field mustard | nucleus | 43.53 | 48.66 |
| Solyc02g077660.2.1 | Tomato | nucleus | 46.5 | 48.63 |
| CDX90154 | Canola | nucleus | 43.48 | 48.51 |
| Bra032908.1-P | Field mustard | nucleus | 45.24 | 47.77 |
| CDY34099 | Canola | nucleus | 45.24 | 47.69 |
| Zm00001d043915_P002 | Maize | nucleus | 34.13 | 47.13 |
| CDY65661 | Canola | nucleus | 44.79 | 47.01 |
| AT1G28420.1 | Thale cress | nucleus | 45.41 | 46.74 |
| Os05t0562400-01 | Rice | nucleus | 36.18 | 45.45 |
| KRH55891 | Soybean | nucleus | 46.1 | 45.42 |
| GSMUA_Achr9P06610_001 | Banana | nucleus | 44.67 | 44.22 |
| GSMUA_Achr8P27210_001 | Banana | nucleus | 47.58 | 43.74 |
| HORVU3Hr1G061660.1 | Barley | nucleus | 44.33 | 42.19 |
| KXG33083 | Sorghum | nucleus | 43.82 | 42.18 |
| TraesCS3D01G245800.2 | Wheat | nucleus | 44.5 | 42.1 |
| TraesCS3A01G245700.2 | Wheat | nucleus | 44.44 | 42.07 |
| TraesCS3B01G273900.1 | Wheat | nucleus | 44.22 | 41.95 |
| KXG33081 | Sorghum | nucleus | 43.93 | 41.86 |
| Zm00001d039002_P019 | Maize | nucleus, plastid | 43.25 | 41.43 |
| TraesCS1B01G424100.1 | Wheat | nucleus | 43.7 | 41.17 |
| Zm00001d009562_P007 | Maize | nucleus, plastid | 43.87 | 41.02 |
| TraesCS1D01G403700.1 | Wheat | nucleus | 43.25 | 40.98 |
| HORVU1Hr1G087180.1 | Barley | nucleus | 43.13 | 40.76 |
| TraesCS1A01G395600.1 | Wheat | nucleus | 43.08 | 40.67 |
| Zm00001d011560_P012 | Maize | nucleus | 43.08 | 40.62 |
| GSMUA_Achr6P26980_001 | Banana | nucleus | 46.27 | 36.19 |
| Zm00001d043914_P001 | Maize | nucleus | 9.17 | 28.6 |
| OQU75646 | Sorghum | cytosol | 9.06 | 27.56 |
| KRH41406 | Soybean | nucleus | 15.73 | 25.53 |
| KRH60120 | Soybean | nucleus | 15.56 | 25.23 |
| KRH62715 | Soybean | nucleus | 3.36 | 21.93 |
| KRH14573 | Soybean | nucleus | 5.58 | 18.6 |
| KRH73554 | Soybean | nucleus | 5.53 | 18.44 |
| KRG99068 | Soybean | nucleus | 5.47 | 18.22 |
| KRH45931 | Soybean | nucleus | 5.41 | 17.72 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100777465 | MapMan:15.5.3.7 | EMBL:ACUP02008354 | ncoils:Coil | InterPro:DDT_dom |
| EnsemblPlantsGene:GLYMA_13G235300 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:HB1/Asxl_HTH | InterPro:Homeobox-like_sf |
| InterPro:Homeobox_dom | UniProt:I1M1Z5 | InterPro:IPR001356 | InterPro:IPR018501 | EnsemblPlants:KRH21359 | ProteinID:KRH21359 |
| ProteinID:KRH21359.1 | PFAM:PF00046 | PFAM:PF02791 | PFAM:PF05066 | PFAM:PF15612 | PFAM:PF15613 |
| PFscan:PS50071 | PFscan:PS50827 | PANTHER:PTHR36968 | PANTHER:PTHR36968:SF6 | SMART:SM00389 | SMART:SM00571 |
| SUPFAM:SSF46689 | UniParc:UPI000233B367 | InterPro:WHIM1_dom | InterPro:WHIM2_dom | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr13:+:34590673..34601384
Molecular Weight (calculated)
198177.0 Da
IEP (calculated)
5.352
GRAVY (calculated)
-0.787
Length
1755 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEAEAENNDV KKEENSNDNN NNNNNNESNS KIGNSSEGLS KPKRQMKTPF QLETLEKAYA VENYPSETMR VELSEKLGLS DRQLQMWFCH RRLKDKKELP
0101: SKKPRKAAAL PDSPVEEPKL GPEVGVEYGS GSGSGSSPFA RSELRNVVPR GYYESPQTIM ELRAIACVEA QLGEPLREDG PILGVEFDPL PPDAFGAPLA
0201: VTEQQKRPSL AYDSKIYERH DARANKAIAR TFHEYPFLPN QSGIRSDVYG QLNLPHLHDP MDGPTRTPFP LGNEQQPRVH APQSHSSHVR LLSQQQDKLV
0301: ITYPSPPRDN DVAPKREPHT NITSTGMNSH LTDHPIVGQD NPYALAGGQV SHNDAVLRME RKRKSDETKV AKEVEAYEMR MRKELEKQDN LRRKSEERMR
0401: KEMERQDRER RKEEERLMRE KQREEERSRR EQRREMERRE KFLLKEHLRA EKRRQKEEIR KEKEEERRKA ALEKANARRI AKESMELIED EQLELMELAA
0501: ASKGLSSIIH IDLDTLQNLE SFRDSLCIFP PKSVKLRKPF AIQPWIDSEQ NIGNLLMVWR FLITFADVLD LWPFTLDEFV QAFHDYDSRL LGEIHVVLLK
0601: VIIKDIEDVA RTPSTGLGMN QNGAANPGGG HPEIVEGAYA WGFDIRNWQK NLNQLTWPEV FRQLALSAGL GPQLKKRNIT WSYAIDKDEG KSCKDIISTL
0701: RNGSAAESAV AKMQERGLLA PRRSRHRLTP GTVKFAAFHV LSLEGSKGLT VLELAEKIQK SGLRDLTTSK TPEASISVAL TRDTKLFERI APSTYCVRDA
0801: FRKNPADADS ILSEARKKIQ IFENGFLAGE DADDVEREEE SESDEVDEDP EDDDLVNPSS ANQNSEQYED TNICSSNGKE NLGHNVDLIQ KEFDTDLPCF
0901: PKNGSKDADC PISVTRQPVA CEDLNASNLD QDNMEIDESK SGESWILGLT EGEYSDLSVE ERLNALVALV GVANEGNSIR VVLEDRLESA NALKKQMWAE
1001: AQIDKVRLKD DNISKLDFPS LTGNKVETPY TYPAMEGNLS PMLDININNI NNEASPSTAE NQKGDPVAQS MPMEKCSSIQ DFGSGTGADI SQTQVSAQYS
1101: KRSRSQLKSY IAHIAEEMYV YRSLPLGQDR RRNRYWQFVA SASSNDPGSG RIFVEYHDGK WRLIDSEEAF DALLTSLDSR GIRESHLRLM LLKIENSFKE
1201: NVRKRNACCA KNGSRGEFSI KIEANEACSI PEHNAGSGSP SSTLHDLNAD PSETSSSFKI ELGKTESEKK AALRRYQDFQ KWLWKECYNS SVLCAMKYGI
1301: ERCKPQMDIC DICLNLYFVE DSHCNSCHQT FPSNNGFNFS KHAFQCRDKL SKDNCILEYS LPLRTRLLKV LLACMEVSVL SEAFETNWIN DVRKHWGIKL
1401: SKSSSVEELL QILTLFERSL RRDFLSLNFS TTDELLGSSS MSERSVQAST DPESVAVLPW VPLTTAALSL RLFEIDSSIS YVKLERLEPC EEKEAREYIK
1501: LPSRYTHMKS NREVEPAEFV HDEFTKDKSV PKKIVRNGNK RGRGTNEQGR GKKLAKRVCN SKRDGGRKNA KVTDNLSHRL KQQARGTQGQ GAGRGRRTIR
1601: KRRMGKRAVE DLLLGHTTAS HSYKIDREPV RNLDEEWDGE KASPMTPVHI GVAADNSNSA EEVESDDDNA QAVEYDQGNW EVGFNGVPPN RWSRGLVGMS
1701: DEDVDAFEEL NDNGIEENEE EDSEADVMSE GSDGIPNTVV NVGGSDSALS EDSSD
0101: SKKPRKAAAL PDSPVEEPKL GPEVGVEYGS GSGSGSSPFA RSELRNVVPR GYYESPQTIM ELRAIACVEA QLGEPLREDG PILGVEFDPL PPDAFGAPLA
0201: VTEQQKRPSL AYDSKIYERH DARANKAIAR TFHEYPFLPN QSGIRSDVYG QLNLPHLHDP MDGPTRTPFP LGNEQQPRVH APQSHSSHVR LLSQQQDKLV
0301: ITYPSPPRDN DVAPKREPHT NITSTGMNSH LTDHPIVGQD NPYALAGGQV SHNDAVLRME RKRKSDETKV AKEVEAYEMR MRKELEKQDN LRRKSEERMR
0401: KEMERQDRER RKEEERLMRE KQREEERSRR EQRREMERRE KFLLKEHLRA EKRRQKEEIR KEKEEERRKA ALEKANARRI AKESMELIED EQLELMELAA
0501: ASKGLSSIIH IDLDTLQNLE SFRDSLCIFP PKSVKLRKPF AIQPWIDSEQ NIGNLLMVWR FLITFADVLD LWPFTLDEFV QAFHDYDSRL LGEIHVVLLK
0601: VIIKDIEDVA RTPSTGLGMN QNGAANPGGG HPEIVEGAYA WGFDIRNWQK NLNQLTWPEV FRQLALSAGL GPQLKKRNIT WSYAIDKDEG KSCKDIISTL
0701: RNGSAAESAV AKMQERGLLA PRRSRHRLTP GTVKFAAFHV LSLEGSKGLT VLELAEKIQK SGLRDLTTSK TPEASISVAL TRDTKLFERI APSTYCVRDA
0801: FRKNPADADS ILSEARKKIQ IFENGFLAGE DADDVEREEE SESDEVDEDP EDDDLVNPSS ANQNSEQYED TNICSSNGKE NLGHNVDLIQ KEFDTDLPCF
0901: PKNGSKDADC PISVTRQPVA CEDLNASNLD QDNMEIDESK SGESWILGLT EGEYSDLSVE ERLNALVALV GVANEGNSIR VVLEDRLESA NALKKQMWAE
1001: AQIDKVRLKD DNISKLDFPS LTGNKVETPY TYPAMEGNLS PMLDININNI NNEASPSTAE NQKGDPVAQS MPMEKCSSIQ DFGSGTGADI SQTQVSAQYS
1101: KRSRSQLKSY IAHIAEEMYV YRSLPLGQDR RRNRYWQFVA SASSNDPGSG RIFVEYHDGK WRLIDSEEAF DALLTSLDSR GIRESHLRLM LLKIENSFKE
1201: NVRKRNACCA KNGSRGEFSI KIEANEACSI PEHNAGSGSP SSTLHDLNAD PSETSSSFKI ELGKTESEKK AALRRYQDFQ KWLWKECYNS SVLCAMKYGI
1301: ERCKPQMDIC DICLNLYFVE DSHCNSCHQT FPSNNGFNFS KHAFQCRDKL SKDNCILEYS LPLRTRLLKV LLACMEVSVL SEAFETNWIN DVRKHWGIKL
1401: SKSSSVEELL QILTLFERSL RRDFLSLNFS TTDELLGSSS MSERSVQAST DPESVAVLPW VPLTTAALSL RLFEIDSSIS YVKLERLEPC EEKEAREYIK
1501: LPSRYTHMKS NREVEPAEFV HDEFTKDKSV PKKIVRNGNK RGRGTNEQGR GKKLAKRVCN SKRDGGRKNA KVTDNLSHRL KQQARGTQGQ GAGRGRRTIR
1601: KRRMGKRAVE DLLLGHTTAS HSYKIDREPV RNLDEEWDGE KASPMTPVHI GVAADNSNSA EEVESDDDNA QAVEYDQGNW EVGFNGVPPN RWSRGLVGMS
1701: DEDVDAFEEL NDNGIEENEE EDSEADVMSE GSDGIPNTVV NVGGSDSALS EDSSD
0001: MEMGSDGEDQ KIRSVVGDAN LNNKKKKIDN NSSSKDGRVK PKRQMKTPFQ LETLEKVYSE EKYPSEATRA ELSEKLDLSD RQLQMWFCHR RLKDKKDGQS
0101: NKPVKSSVAA VQSASVNELP AAAGSVPEQD SRSDSGSESG CSPYSNSRRN FASGSSSSRA ELDEYETMGK PSYESRLSTM VHRAIVCIEA QLGEPLRDDG
0201: PILGMEFDPL PPGAFGTPIA MQKHLLHPYE SDLYERHDPR PRRSHAAARS FHEQQSLDDP SSFTPNMYER YSENHARGMD YEVARSRISS FMHANGPVPR
0301: SYVTPGHASR NCSTSQQDMP SPIESAHHGD RFLLEKDSSV LGTEDPYLLP DGVRKSSDVH RKGKINDGRL GRGSETRENH GPKDLEKLEI QRKKNEERMR
0401: KEMERNERER RKEEERLMRE RIKEEERLQR EQRREVERRE KFLQRENERA EKKKQKDEIR REKDAIRRKL AIEKATARRI AKESMDLIED EQLELMELAA
0501: ISKGLPSVLQ LDHDTLQNLE VYRDSLSTFP PKSLQLKMPF AISPWKDSDE TVGNLLMVWR FLISFSDVLD LWPFTLDEFI QAFHDYDSRL LGEIHVTLLR
0601: SIIRDVEDVA RTPFSGIGNN QYTTANPEGG HPQIVEGAYA WGFDIRSWKK HLNPLTWPEI LRQLALSAGF GPKLKKKHSR LTNTGDKDEA KGCEDVISTI
0701: RNGTAAESAF ASMREKGLLA PRKSRHRLTP GTVKFAAFHV LSLEGSKGLT VLELADKIQK SGLRDLTTSK TPEASISVAL TRDVKLFERI APSTYCVRAP
0801: YVKDPKDGEA ILADARKKIR AFENGFTGPE DVNDLERDED FEIDIDEDPE VDDLATLASA SKSAVLGEAN VLSGKGVDTM FCDVKADVKS ELEKEFSSPP
0901: PSTMKSIVPQ HSERHKNTVV GGVDAVIDES NQGQSWIQGL TEGDYCHLSV EERLNALVAL VGIANEGNSI RTGLEDRMEA ANALKKQMWA EAQLDNSCMR
1001: DVLKLDLQNL ASSKTESTIG LPIIQSSTRE RDSFDRDPSQ LLDETKPLED LSNDLHKSSA ERALINQDAN ISQENYASKR SRSQLKSYIG HKAEEVYPYR
1101: SLPLGQDRRH NRYWHFAVSV SKSDPCSRLL FVELHDGKWL LIDSEEAFDI LVASLDMRGI RESHLRIMLQ KIEGSFKENA CKDIKLARNP FLTEKSVVNH
1201: SPTDSVSPSS SAISGSNSDS METSTSIRVD LGRNDTENKN LSKRFHDFQR WMWTETYSSL PSCARKYGKK RSELLATCDA CVASYLSEYT FCSSCHQRLD
1301: VVDSSEILDS GLAVSPLPFG VRLLKPLLVF LEASVPDEAL ESFWTEDQRK KWGFRLNTSS SPGELLQVLT SLESAIKKES LSSNFMSAKE LLGAANAEAD
1401: DQGSVDVLPW IPKTVSAVAL RLSELDASII YVKPEKPEVI PEDENEQISL FPRDSPFKGK GPREQEDQDE VAPNPGNRNK KRARVSLGSG SNRKVKRKKA
1501: QSGLNKFVVG RRNVAVNSNL MAVELNHQVP GKGKRTVRKR PERIDEDNSH LVNRMANIVR PKSEEVEEDE EEEEQTFRDI NEDWAAGETP REMEEDWANE
1601: TPNRMMTPMQ VDDESDNSVG VESEDEDGGG QFVDYSQRNK WGLDWNSNLN VAIEEDEEEE VVGVGRVEGE DDAEMSESSE DDDVPANNAA NNYDRESEGY
1701: SSSDS
0101: NKPVKSSVAA VQSASVNELP AAAGSVPEQD SRSDSGSESG CSPYSNSRRN FASGSSSSRA ELDEYETMGK PSYESRLSTM VHRAIVCIEA QLGEPLRDDG
0201: PILGMEFDPL PPGAFGTPIA MQKHLLHPYE SDLYERHDPR PRRSHAAARS FHEQQSLDDP SSFTPNMYER YSENHARGMD YEVARSRISS FMHANGPVPR
0301: SYVTPGHASR NCSTSQQDMP SPIESAHHGD RFLLEKDSSV LGTEDPYLLP DGVRKSSDVH RKGKINDGRL GRGSETRENH GPKDLEKLEI QRKKNEERMR
0401: KEMERNERER RKEEERLMRE RIKEEERLQR EQRREVERRE KFLQRENERA EKKKQKDEIR REKDAIRRKL AIEKATARRI AKESMDLIED EQLELMELAA
0501: ISKGLPSVLQ LDHDTLQNLE VYRDSLSTFP PKSLQLKMPF AISPWKDSDE TVGNLLMVWR FLISFSDVLD LWPFTLDEFI QAFHDYDSRL LGEIHVTLLR
0601: SIIRDVEDVA RTPFSGIGNN QYTTANPEGG HPQIVEGAYA WGFDIRSWKK HLNPLTWPEI LRQLALSAGF GPKLKKKHSR LTNTGDKDEA KGCEDVISTI
0701: RNGTAAESAF ASMREKGLLA PRKSRHRLTP GTVKFAAFHV LSLEGSKGLT VLELADKIQK SGLRDLTTSK TPEASISVAL TRDVKLFERI APSTYCVRAP
0801: YVKDPKDGEA ILADARKKIR AFENGFTGPE DVNDLERDED FEIDIDEDPE VDDLATLASA SKSAVLGEAN VLSGKGVDTM FCDVKADVKS ELEKEFSSPP
0901: PSTMKSIVPQ HSERHKNTVV GGVDAVIDES NQGQSWIQGL TEGDYCHLSV EERLNALVAL VGIANEGNSI RTGLEDRMEA ANALKKQMWA EAQLDNSCMR
1001: DVLKLDLQNL ASSKTESTIG LPIIQSSTRE RDSFDRDPSQ LLDETKPLED LSNDLHKSSA ERALINQDAN ISQENYASKR SRSQLKSYIG HKAEEVYPYR
1101: SLPLGQDRRH NRYWHFAVSV SKSDPCSRLL FVELHDGKWL LIDSEEAFDI LVASLDMRGI RESHLRIMLQ KIEGSFKENA CKDIKLARNP FLTEKSVVNH
1201: SPTDSVSPSS SAISGSNSDS METSTSIRVD LGRNDTENKN LSKRFHDFQR WMWTETYSSL PSCARKYGKK RSELLATCDA CVASYLSEYT FCSSCHQRLD
1301: VVDSSEILDS GLAVSPLPFG VRLLKPLLVF LEASVPDEAL ESFWTEDQRK KWGFRLNTSS SPGELLQVLT SLESAIKKES LSSNFMSAKE LLGAANAEAD
1401: DQGSVDVLPW IPKTVSAVAL RLSELDASII YVKPEKPEVI PEDENEQISL FPRDSPFKGK GPREQEDQDE VAPNPGNRNK KRARVSLGSG SNRKVKRKKA
1501: QSGLNKFVVG RRNVAVNSNL MAVELNHQVP GKGKRTVRKR PERIDEDNSH LVNRMANIVR PKSEEVEEDE EEEEQTFRDI NEDWAAGETP REMEEDWANE
1601: TPNRMMTPMQ VDDESDNSVG VESEDEDGGG QFVDYSQRNK WGLDWNSNLN VAIEEDEEEE VVGVGRVEGE DDAEMSESSE DDDVPANNAA NNYDRESEGY
1701: SSSDS
Arabidopsis Description
RLT1Homeobox-DDT domain protein RLT1 [Source:UniProtKB/Swiss-Prot;Acc:F4HY56]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.