Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_12s0028g03090.t01 | Wine grape | nucleus | 49.35 | 57.68 |
| Zm00001d043915_P002 | Maize | nucleus | 34.19 | 47.91 |
| Solyc07g053610.2.1 | Tomato | nucleus | 47.28 | 47.25 |
| KRH21359 | Soybean | nucleus | 45.42 | 46.1 |
| Os05t0562400-01 | Rice | nucleus | 35.65 | 45.45 |
| GSMUA_Achr9P06610_001 | Banana | nucleus | 45.2 | 45.4 |
| AT5G44180.1 | Thale cress | nucleus | 43.12 | 45.34 |
| KRH50116 | Soybean | nucleus | 44.92 | 44.89 |
| CDY22305 | Canola | nucleus | 41.04 | 44.6 |
| Bra033725.1-P | Field mustard | nucleus | 41.04 | 44.57 |
| KRH20389 | Soybean | nucleus | 44.69 | 44.32 |
| CDX94760 | Canola | nucleus | 41.21 | 44.06 |
| GSMUA_Achr8P27210_001 | Banana | nucleus | 46.1 | 43.01 |
| KXG33083 | Sorghum | nucleus | 43.35 | 42.35 |
| KXG33081 | Sorghum | nucleus | 43.8 | 42.35 |
| HORVU3Hr1G061660.1 | Barley | nucleus | 43.4 | 41.92 |
| TraesCS3D01G245800.2 | Wheat | nucleus | 43.63 | 41.89 |
| TraesCS3A01G245700.2 | Wheat | nucleus | 43.57 | 41.86 |
| TraesCS3B01G273900.1 | Wheat | nucleus | 43.4 | 41.78 |
| Zm00001d011560_P012 | Maize | nucleus | 42.95 | 41.11 |
| Zm00001d039002_P019 | Maize | nucleus, plastid | 41.94 | 40.78 |
| Zm00001d009562_P007 | Maize | nucleus, plastid | 42.67 | 40.49 |
| TraesCS1D01G403700.1 | Wheat | nucleus | 41.61 | 40.01 |
| TraesCS1B01G424100.1 | Wheat | nucleus | 41.66 | 39.83 |
| TraesCS1A01G395600.1 | Wheat | nucleus | 41.55 | 39.81 |
| HORVU1Hr1G087180.1 | Barley | nucleus | 41.38 | 39.69 |
| GSMUA_Achr6P26980_001 | Banana | nucleus | 45.26 | 35.92 |
| Zm00001d043914_P001 | Maize | nucleus | 8.7 | 27.53 |
| OQU75646 | Sorghum | cytosol | 8.7 | 26.86 |
| KRH41406 | Soybean | nucleus | 15.05 | 24.79 |
| KRH60120 | Soybean | nucleus | 14.82 | 24.4 |
| KRH62715 | Soybean | nucleus | 3.2 | 21.19 |
| KRG99068 | Soybean | nucleus | 5.56 | 18.79 |
| KRH45931 | Soybean | nucleus | 5.33 | 17.72 |
| KRH73554 | Soybean | nucleus | 5.22 | 17.68 |
| KRH14573 | Soybean | nucleus | 5.22 | 17.65 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100797480 | MapMan:15.5.3.7 | EMBL:ACUP02004065 | ncoils:Coil | InterPro:DDT_dom |
| EnsemblPlantsGene:GLYMA_06G288900 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009791 |
| GO:GO:0009987 | GO:GO:0010228 | GO:GO:0043565 | GO:GO:0045892 | InterPro:HB1/Asxl_HTH | InterPro:Homeobox-like_sf |
| InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR018501 | UniProt:K7KY04 | EnsemblPlants:KRH55891 | ProteinID:KRH55891 |
| ProteinID:KRH55891.1 | PFAM:PF00046 | PFAM:PF02791 | PFAM:PF05066 | PFAM:PF15612 | PFAM:PF15613 |
| PFscan:PS50071 | PFscan:PS50827 | SMART:SM00389 | SMART:SM00571 | SUPFAM:SSF46689 | UniParc:UPI000296DA63 |
| InterPro:WHIM1_dom | InterPro:WHIM2_dom | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr6:+:47747273..47762003
Molecular Weight (calculated)
200255.0 Da
IEP (calculated)
5.734
GRAVY (calculated)
-0.691
Length
1781 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEGVSEGEKK KEPVEGENKS KRKMKTASQL EVLEKAYAAE AYPSEALRAE LSVKLSLSDR QLQMWFCHRR LKDRNAKKLQ NDSSLAGAPA VGEEGVEQVT
0101: GADVGRDCGL ASGPFDHLDS RKIVPRPGMT AFPSMGAGLP AVVGSSYYEP PQNMDVLQVV AFVERQLGEP IREDGPILGM EFDSLPPDAF GAPIGIVTMG
0201: QHRQCGGPFE AKIYEQLDKD VSRTLHEYQF IPEKPSVRNE TYERVAPSIH YSSLDGIPHS RTLLSSGRSF LNGNESAPYG YGIQGHLPGL NLLSRQGRQN
0301: HLLPSASGEN DGIPRKNPFV DVTADIHNGA HPITLIDSPL MPSDGRVIHV EELSRLQRKR KNDDTKMQQE LEAQERKNRK ELEKQDILRQ KREEQTKKEM
0401: ERHERERQKE EERLLRERQK EEERLLRERQ REEERYQREQ RREQERRQKF LQKESIRAEK LRQKEELRRE KEAARIKAAN ERAIARRIAK ESIELIEDER
0501: LELMELAASK KELSSILALD YETIQNLEFY RDGRASFPPK SVQLKRIFSI KPWSDSDENV GNLLMVWRFL ITFADVLGIW PFTVDELIQA FHDHDPRLLG
0601: EIHIALLKSI IKDIEDVART PSTGLGCNQH SVTNSGGGHP QVVEGAYLWG FDIRNWQRHL NPLTWPEILR QFALSAGFGP QLKKLSIEQV HPCNNNEGND
0701: GRDIISNLRS GAAVENAVAI MQEKGLSNPR RSRHCLTPGT VKFAAFHVLS LEGSKGLNIL EVADKIQKSG LRDLTTSKTP EASISAALSR DTKLFERTAP
0801: STYCVRPAYR KDPADSEAIY SGARERIRMF KSGFVEAEAA DNGERDEDSE SDMEEDPEID DLGTETNAKK ESSNYEGFNA DSEMRNRKDS VEVLQTHDTS
0901: LEKVGEDLAS IVAKDFNEHK DVSTSSGIAV CNNDVVDPNV KGIAVDESIP GEPWIQGLTE GEYSDLSVVE RLHALVALIG VATEGNSIRV VLEERLEAAN
1001: ALKKQMWAEA QLDKRRIKED YFAKMQSVSY LDKTNELTVV FPSADSKHSP VLIADDKNSK ALLNSHDLHE QSIELQENQN HLQSSPLKVN KQMQDCSTGP
1101: DNYSFQHSGY VVEKSRSNLK SYIGHLAEQT YMYRSLPLGL DRRRNRYWQF TTSAQNDPGC GRIFVELNDG RWKLIDSEEG FDALLASLDV RGIRESHLHM
1201: MLQRIETYFK EFVRKNAQNV NMRMQNGDPV ERLKTESVEM ASNQDCSANI HGSSSVCIDN LDASETSTSF VVQLGRNEAD NKDACMRYWD FEKWMRKECL
1301: NFSVLSAMKF GKKWCHQLQS ICDLCLHAYF SGGAPCSSCC RTFSACKSNP SSSKHIVHSE GKVKIDIDCF HASSSLSLRI RLLKILLSIV EVTLPLEALQ
1401: PLWRDSCRKS WSTKLDASSS SEDLLQILTA LEGAIKREYL DSNYETTFEL LGLFSASGCH TKDSIDGERM SVLPWVPYTS AAVALRLLQL DACIFYTSQQ
1501: KLESEKDKKI GIVMKLPSKH ASARKSYNAG AIETSHQAER AVENWVDLGA GLTSCSRGQR TQQGRGRSHG GRTSSKRRVV SSRSGSKKRS TTSRSRKMGK
1601: LLEWKGRPCR QGGNARGPRS IRSWQKSEAK VDVITGERDT PKDVMEEAAG IFVQEEINEG EMEAAALNAS SSERSGYEDD VYQEIGDEYD YLVDNNDGYQ
1701: GVFSGKSENL LHGSHYNVVG KEDMDIDDNV DDDDDDNGKI DLDVEGYIIG GNSDARDRKE ENAEQNMDLD GVGSTSSDYS D
0101: GADVGRDCGL ASGPFDHLDS RKIVPRPGMT AFPSMGAGLP AVVGSSYYEP PQNMDVLQVV AFVERQLGEP IREDGPILGM EFDSLPPDAF GAPIGIVTMG
0201: QHRQCGGPFE AKIYEQLDKD VSRTLHEYQF IPEKPSVRNE TYERVAPSIH YSSLDGIPHS RTLLSSGRSF LNGNESAPYG YGIQGHLPGL NLLSRQGRQN
0301: HLLPSASGEN DGIPRKNPFV DVTADIHNGA HPITLIDSPL MPSDGRVIHV EELSRLQRKR KNDDTKMQQE LEAQERKNRK ELEKQDILRQ KREEQTKKEM
0401: ERHERERQKE EERLLRERQK EEERLLRERQ REEERYQREQ RREQERRQKF LQKESIRAEK LRQKEELRRE KEAARIKAAN ERAIARRIAK ESIELIEDER
0501: LELMELAASK KELSSILALD YETIQNLEFY RDGRASFPPK SVQLKRIFSI KPWSDSDENV GNLLMVWRFL ITFADVLGIW PFTVDELIQA FHDHDPRLLG
0601: EIHIALLKSI IKDIEDVART PSTGLGCNQH SVTNSGGGHP QVVEGAYLWG FDIRNWQRHL NPLTWPEILR QFALSAGFGP QLKKLSIEQV HPCNNNEGND
0701: GRDIISNLRS GAAVENAVAI MQEKGLSNPR RSRHCLTPGT VKFAAFHVLS LEGSKGLNIL EVADKIQKSG LRDLTTSKTP EASISAALSR DTKLFERTAP
0801: STYCVRPAYR KDPADSEAIY SGARERIRMF KSGFVEAEAA DNGERDEDSE SDMEEDPEID DLGTETNAKK ESSNYEGFNA DSEMRNRKDS VEVLQTHDTS
0901: LEKVGEDLAS IVAKDFNEHK DVSTSSGIAV CNNDVVDPNV KGIAVDESIP GEPWIQGLTE GEYSDLSVVE RLHALVALIG VATEGNSIRV VLEERLEAAN
1001: ALKKQMWAEA QLDKRRIKED YFAKMQSVSY LDKTNELTVV FPSADSKHSP VLIADDKNSK ALLNSHDLHE QSIELQENQN HLQSSPLKVN KQMQDCSTGP
1101: DNYSFQHSGY VVEKSRSNLK SYIGHLAEQT YMYRSLPLGL DRRRNRYWQF TTSAQNDPGC GRIFVELNDG RWKLIDSEEG FDALLASLDV RGIRESHLHM
1201: MLQRIETYFK EFVRKNAQNV NMRMQNGDPV ERLKTESVEM ASNQDCSANI HGSSSVCIDN LDASETSTSF VVQLGRNEAD NKDACMRYWD FEKWMRKECL
1301: NFSVLSAMKF GKKWCHQLQS ICDLCLHAYF SGGAPCSSCC RTFSACKSNP SSSKHIVHSE GKVKIDIDCF HASSSLSLRI RLLKILLSIV EVTLPLEALQ
1401: PLWRDSCRKS WSTKLDASSS SEDLLQILTA LEGAIKREYL DSNYETTFEL LGLFSASGCH TKDSIDGERM SVLPWVPYTS AAVALRLLQL DACIFYTSQQ
1501: KLESEKDKKI GIVMKLPSKH ASARKSYNAG AIETSHQAER AVENWVDLGA GLTSCSRGQR TQQGRGRSHG GRTSSKRRVV SSRSGSKKRS TTSRSRKMGK
1601: LLEWKGRPCR QGGNARGPRS IRSWQKSEAK VDVITGERDT PKDVMEEAAG IFVQEEINEG EMEAAALNAS SSERSGYEDD VYQEIGDEYD YLVDNNDGYQ
1701: GVFSGKSENL LHGSHYNVVG KEDMDIDDNV DDDDDDNGKI DLDVEGYIIG GNSDARDRKE ENAEQNMDLD GVGSTSSDYS D
0001: MEGGSEKTTP EGCGGESKSK RKMKTAAQLE VLENTYSAEP YPSEAIRADL SVKLNLSDRQ LQMWFCHRRL KERKSTTPSK RQRKELVTPT AMESWEPPVN
0101: AGDLVAGNEL DSRRAARGSG GSGVTVVRRF NEPSSAEVRA IGYVEAQLGE RLRDNGPVLG MEFDPLPPGA FGMPIEMPSH RKATRQAFET NIYVRSDVKP
0201: IKDHVRPIRE YQFIPELPSS RTDHSERVSP SHHFGVPLDG SVMRVSAVSA GHRDDYKISP QIPNLNLATH QGKPGHVYSP NLVEYDSPYQ KSYMDTAAQV
0301: HDDPFVKSER EVGNEDEDDD ALQLERHRKN EEARIAREVE AHEKRIRREL EKQDMLRRKR EEQIRKEMER QDRERRKEEE RLLREKQREE ERYLKEQMRE
0401: LQRREKFLKK ETIRAEKMRQ KEEMRKEKEV ARLKAANERA IARKIAKESM ELIEDERLEL MEVAALTKGL PSMLALDFET LQNLDEYRDK QAIFPPTSVK
0501: LKKPFAVKPW NGSDENVANL LMVWRFLITF ADVLGLWPFT LDEFAQAFHD YDPRLMGEIH IVLLKTIIKD IEGVVRTLST GVGANQNVAA NPGGGHPHVV
0601: EGAYAWGFDI RSWRKNLNVF TWPEILRQLA LSAGLGPQLK KMNIRTVSVH DDNEANNSEN VIFNLRKGVA AENAFAKMQE RGLSNPRRSR HRLTPGTVKF
0701: AAFHVLSLEG EKGLNILEVA EKIQKSGLRD LTTSRTPEAS VAAALSRDTK LFERVAPSTY CVRASYRKDA GDAETIFAEA RERIRAFKSG ITDVEDVDDA
0801: ERDEDSESDV GEDPEVDVNL KKEDPNPLKV ENLIGVEPLL ENGKLDTVPM KTELGLPLTP SLPEEMKDEK RDDTLADQSL EDAVANGEDS ACFDESKLGE
0901: QWVQGLVEGD YSNLSSEERL NALVALIGIA TEGNTIRIAL EERLEVASAL KKQMWGEVQL DKRWKEESLI RANYLSYPTA KPGLNIATPA SGNQESSSAD
1001: VTPISSQDPV SLPQIDVNNV IAGPSLQLQE NVPGVENLQY QQQQGYTADR ERLRAQLKAY VGYKAEELYV YRSLPLGQDR RRNRYWRFSA SASRNDPGCG
1101: RIFVELQDGR WRLIDSEEAF DYLVKSLDVR GVRESHLHFM LLKIEASFKE ALRRNVAANP GVCSISSSLD SDTAEISTTF KIELGDSNAV ERCSVLQRFH
1201: SFEKWMWDNM LHPSALSAFK YGAKQSSPLF RICRICAELH FVGDICCPSC GQMHAGPDVG ELCFAEQVAQ LGDNLRRGDT GFILRSSILS PLRIRLLKVQ
1301: LALVEASLPP EGLEAFWTEN LRKSWGMKLL SSSSHEDLYQ VLTTLEAALK RDFLSSNFET TSELLGLQEG ALASDLTCGV NVLPWIPKTA GGVALRLFDF
1401: DSSIVYTPDQ NNDPLKDKES EDFVGLETNI LRNLHEKDVM ETPVQVAAYK QEENWTDPGL GGVSSSGRGG RPPRGRGRPR ARGNGKKPAV SVKPPRGAAN
1501: SNGETMLRPR AQPRGGRKNG RRSGTKGRKR PTQGTLGICN EVGGGRRVKE VAVTAKTSLP DNDDDWIETP ELQDDDGEAS SSGRSFQYED YDDDDVMAPI
1601: DDFDGGGESS KLVGRGEFSL HSDDEYEEEE EEEEDMNMKM DVNVVDDEDE DYINEDSYGR KQHGISISND AATRKRFNKF EDPDLTSSSS SDFQ
0101: AGDLVAGNEL DSRRAARGSG GSGVTVVRRF NEPSSAEVRA IGYVEAQLGE RLRDNGPVLG MEFDPLPPGA FGMPIEMPSH RKATRQAFET NIYVRSDVKP
0201: IKDHVRPIRE YQFIPELPSS RTDHSERVSP SHHFGVPLDG SVMRVSAVSA GHRDDYKISP QIPNLNLATH QGKPGHVYSP NLVEYDSPYQ KSYMDTAAQV
0301: HDDPFVKSER EVGNEDEDDD ALQLERHRKN EEARIAREVE AHEKRIRREL EKQDMLRRKR EEQIRKEMER QDRERRKEEE RLLREKQREE ERYLKEQMRE
0401: LQRREKFLKK ETIRAEKMRQ KEEMRKEKEV ARLKAANERA IARKIAKESM ELIEDERLEL MEVAALTKGL PSMLALDFET LQNLDEYRDK QAIFPPTSVK
0501: LKKPFAVKPW NGSDENVANL LMVWRFLITF ADVLGLWPFT LDEFAQAFHD YDPRLMGEIH IVLLKTIIKD IEGVVRTLST GVGANQNVAA NPGGGHPHVV
0601: EGAYAWGFDI RSWRKNLNVF TWPEILRQLA LSAGLGPQLK KMNIRTVSVH DDNEANNSEN VIFNLRKGVA AENAFAKMQE RGLSNPRRSR HRLTPGTVKF
0701: AAFHVLSLEG EKGLNILEVA EKIQKSGLRD LTTSRTPEAS VAAALSRDTK LFERVAPSTY CVRASYRKDA GDAETIFAEA RERIRAFKSG ITDVEDVDDA
0801: ERDEDSESDV GEDPEVDVNL KKEDPNPLKV ENLIGVEPLL ENGKLDTVPM KTELGLPLTP SLPEEMKDEK RDDTLADQSL EDAVANGEDS ACFDESKLGE
0901: QWVQGLVEGD YSNLSSEERL NALVALIGIA TEGNTIRIAL EERLEVASAL KKQMWGEVQL DKRWKEESLI RANYLSYPTA KPGLNIATPA SGNQESSSAD
1001: VTPISSQDPV SLPQIDVNNV IAGPSLQLQE NVPGVENLQY QQQQGYTADR ERLRAQLKAY VGYKAEELYV YRSLPLGQDR RRNRYWRFSA SASRNDPGCG
1101: RIFVELQDGR WRLIDSEEAF DYLVKSLDVR GVRESHLHFM LLKIEASFKE ALRRNVAANP GVCSISSSLD SDTAEISTTF KIELGDSNAV ERCSVLQRFH
1201: SFEKWMWDNM LHPSALSAFK YGAKQSSPLF RICRICAELH FVGDICCPSC GQMHAGPDVG ELCFAEQVAQ LGDNLRRGDT GFILRSSILS PLRIRLLKVQ
1301: LALVEASLPP EGLEAFWTEN LRKSWGMKLL SSSSHEDLYQ VLTTLEAALK RDFLSSNFET TSELLGLQEG ALASDLTCGV NVLPWIPKTA GGVALRLFDF
1401: DSSIVYTPDQ NNDPLKDKES EDFVGLETNI LRNLHEKDVM ETPVQVAAYK QEENWTDPGL GGVSSSGRGG RPPRGRGRPR ARGNGKKPAV SVKPPRGAAN
1501: SNGETMLRPR AQPRGGRKNG RRSGTKGRKR PTQGTLGICN EVGGGRRVKE VAVTAKTSLP DNDDDWIETP ELQDDDGEAS SSGRSFQYED YDDDDVMAPI
1601: DDFDGGGESS KLVGRGEFSL HSDDEYEEEE EEEEDMNMKM DVNVVDDEDE DYINEDSYGR KQHGISISND AATRKRFNKF EDPDLTSSSS SDFQ
Arabidopsis Description
RLT2Homeobox-DDT domain protein RLT2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFH1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.