Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY22305 | Canola | nucleus | 98.9 | 98.96 |
| AT5G44180.1 | Thale cress | nucleus | 81.28 | 78.69 |
| VIT_12s0028g03090.t01 | Wine grape | nucleus | 44.15 | 47.51 |
| Zm00001d043915_P002 | Maize | nucleus | 34.76 | 44.85 |
| Solyc07g053610.2.1 | Tomato | nucleus | 46.22 | 42.54 |
| KRH55891 | Soybean | nucleus | 44.57 | 41.04 |
| Os05t0562400-01 | Rice | nucleus | 34.7 | 40.73 |
| GSMUA_Achr9P06610_001 | Banana | nucleus | 43.48 | 40.21 |
| Bra010869.1-P | Field mustard | nucleus | 38.29 | 40.0 |
| KXG33081 | Sorghum | nucleus | 43.66 | 38.87 |
| Bra032908.1-P | Field mustard | nucleus | 39.33 | 38.81 |
| KXG33083 | Sorghum | nucleus | 43.11 | 38.78 |
| GSMUA_Achr8P27210_001 | Banana | nucleus | 45.12 | 38.76 |
| HORVU3Hr1G061660.1 | Barley | nucleus | 43.23 | 38.45 |
| TraesCS3A01G245700.2 | Wheat | nucleus | 43.23 | 38.24 |
| TraesCS3D01G245800.2 | Wheat | nucleus | 43.05 | 38.06 |
| Zm00001d039002_P019 | Maize | nucleus, plastid | 42.38 | 37.94 |
| Zm00001d011560_P012 | Maize | nucleus | 43.05 | 37.94 |
| TraesCS3B01G273900.1 | Wheat | nucleus | 42.74 | 37.89 |
| TraesCS1D01G403700.1 | Wheat | nucleus | 42.2 | 37.37 |
| TraesCS1A01G395600.1 | Wheat | nucleus | 42.2 | 37.22 |
| TraesCS1B01G424100.1 | Wheat | nucleus | 42.01 | 36.98 |
| HORVU1Hr1G087180.1 | Barley | nucleus | 41.83 | 36.94 |
| Zm00001d009562_P007 | Maize | nucleus, plastid | 41.28 | 36.07 |
| GSMUA_Achr6P26980_001 | Banana | nucleus | 44.21 | 32.31 |
| Zm00001d043914_P001 | Maize | nucleus | 8.11 | 23.62 |
| OQU75646 | Sorghum | cytosol | 7.99 | 22.7 |
| Bra014277.1-P | Field mustard | nucleus | 14.02 | 22.55 |
| Bra034196.1-P | Field mustard | nucleus | 5.3 | 18.24 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.7 | EnsemblPlantsGene:Bra033725 | EnsemblPlants:Bra033725.1 | EnsemblPlants:Bra033725.1-P | ncoils:Coil |
| InterPro:DDT_dom | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009791 |
| GO:GO:0009987 | GO:GO:0010228 | GO:GO:0043565 | GO:GO:0045892 | InterPro:HB1/Asxl_HTH | InterPro:Homeobox-like_sf |
| InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR018501 | UniProt:M4EY35 | PFAM:PF00046 | PFAM:PF02791 |
| PFAM:PF05066 | PFAM:PF15612 | PFAM:PF15613 | PFscan:PS50071 | PFscan:PS50827 | PANTHER:PTHR36968 |
| SMART:SM00389 | SMART:SM00571 | SUPFAM:SSF46689 | UniParc:UPI000253F6AE | InterPro:WHIM1_dom | InterPro:WHIM2_dom |
| SEG:seg | : | : | : | : | : |
Description
AT5G44180 (E=0.0) | homeobox transcription factor, putative
Coordinates
chrA06:-:25406273..25412649
Molecular Weight (calculated)
184061.0 Da
IEP (calculated)
5.081
GRAVY (calculated)
-0.719
Length
1640 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEDGSEADKN ITPEGAAAAT ESKSKRKMKT AAQLQVLENT YKAEPYPSEA LRADLSVQLN LSDRQLQMWF CHRRLKDRKS STPTKRQRKE STPSSAAESS
0101: KQAAAVNAAD LVAGNELNSF DSRRTARGGG GGGVTVVRRF NEPSPTEVRA IGYVEAQLGE RLREDGPILG MEFDPLPPGA FGTPIEMPTH RKAATRPAFE
0201: TNLYVRSDVK PVKESVRTIR EYQFLPEQPS SRTDHSERAS PASHHYGVPL DASVVMRASS VSGGHRDDYN VSPPIPNLNL SAHHVKPGHV LGEYDSPYQK
0301: SYVDPALHGN EDPFVKSERE LGNDDDEDDG DDDVLLQLER KRKSEEARIA REVEAHEKRI RKELERQDML RRKREEQIRK EVERQDRERR KEEERLLRER
0401: QREEERYLKE QMKEMQRREK FLKKETIRAE KMRQKEEMRR VKEVARLKAA NERAMARKIA KESMELIEDE RLELMEVAAL SLGLPSMVAL DFETLQNLDA
0501: YRDKQVTFPP TSVNLKKPFA VKPWNGSDEN IANLLMVWRF LINFADVLGL WPFTLDEFTQ AFHDHDPRLM GEIHIVLLKT IIKDIEGVAR TLSVGVGANQ
0601: NAAANPGGGH PHLVEGAYAW GFDIRSWRKN LNVFTWPEIL RQLALSAGFG PELKKQDIKT MSVHDENEAN NSENVIFNLR IGAAAENAFA KMQEKGLSNP
0701: RRSRHRLTPG TVKFAAFHVL SIEGEKGLTI LDVAEKIQKS GLRDLTTSRT PEASVAAALS RDTKLFERVA PSTYCVRPSY RKDAGDAETI FAEARERIRM
0801: FKSGVTDVED VDEAEREEDS ESDVGDEPEV DLNLKKEDPD ALEEIGKLTG GVEPSLENGK LKTEPEANPL TPSLPEESTK DEKIDDILPD QEDGDCFDVS
0901: KLGEQWVQGL VEGDYSSLSI EERLNALVAL IGIAIEGNTI RISLEERLEV ASALKKQMWS EVQLDKRWKE ESLIRANYLS YPTPKTQESP SASQDPLSLP
1001: QIDVAAGPSL QLQENVSGME NLQYHHQQSY TADRERPRAE LKAYVGYKAE ELYVYRSLPL GLDRRRNRYW RFSASASRND PGCGRIFVEL QDGRWRLIDS
1101: EEGFDCLVKS LDVRGVRESH LHFMLLKMEA SFKEAVRRNV ETSTDLDTDT AEISSTFKIE LGDGGRSGVL QRFQSFERWM WDNMVHPGAL SAFKYGAKKS
1201: TPLFHICRSC AELHFAVDVC CPGCGQMMMS GGLDVSEMCF ADQVAQLGEI SRRDAGFILR GSNLSPLRIR LLKIQLALVE ASLPPEGLQT HWTESLRKTW
1301: GLKLLSSSSP EELHQVLAML EVALKKDFLS SNFETTCELL DLSEEALLRD VKVVPWIPKT TGGVALRLFE LDSSIAYTPD QNKDPQKDKE SEDFVGLETS
1401: FLRNVQETDV IEATPVQVAY AQEDTEPGSG RGRPPRGRGR PRSQRGKKPS PASGKPPRSA ANSNGEPMLR PRAQPRGGRK KGRRSSGTRT RPTKGTLGIS
1501: NEVGVGGGGR RGKEVNVNAK TALHDWVVET PDDDGEASSS GRSFQYDDDV MAPVDDFGES SKLVGRGEFS LHSDDEYEEE DMDTKMNVDD EDEDYINEED
1601: SDGGREQATE MISMDDAAAS QRRFPFEDPD LTSSSSSDFQ
0101: KQAAAVNAAD LVAGNELNSF DSRRTARGGG GGGVTVVRRF NEPSPTEVRA IGYVEAQLGE RLREDGPILG MEFDPLPPGA FGTPIEMPTH RKAATRPAFE
0201: TNLYVRSDVK PVKESVRTIR EYQFLPEQPS SRTDHSERAS PASHHYGVPL DASVVMRASS VSGGHRDDYN VSPPIPNLNL SAHHVKPGHV LGEYDSPYQK
0301: SYVDPALHGN EDPFVKSERE LGNDDDEDDG DDDVLLQLER KRKSEEARIA REVEAHEKRI RKELERQDML RRKREEQIRK EVERQDRERR KEEERLLRER
0401: QREEERYLKE QMKEMQRREK FLKKETIRAE KMRQKEEMRR VKEVARLKAA NERAMARKIA KESMELIEDE RLELMEVAAL SLGLPSMVAL DFETLQNLDA
0501: YRDKQVTFPP TSVNLKKPFA VKPWNGSDEN IANLLMVWRF LINFADVLGL WPFTLDEFTQ AFHDHDPRLM GEIHIVLLKT IIKDIEGVAR TLSVGVGANQ
0601: NAAANPGGGH PHLVEGAYAW GFDIRSWRKN LNVFTWPEIL RQLALSAGFG PELKKQDIKT MSVHDENEAN NSENVIFNLR IGAAAENAFA KMQEKGLSNP
0701: RRSRHRLTPG TVKFAAFHVL SIEGEKGLTI LDVAEKIQKS GLRDLTTSRT PEASVAAALS RDTKLFERVA PSTYCVRPSY RKDAGDAETI FAEARERIRM
0801: FKSGVTDVED VDEAEREEDS ESDVGDEPEV DLNLKKEDPD ALEEIGKLTG GVEPSLENGK LKTEPEANPL TPSLPEESTK DEKIDDILPD QEDGDCFDVS
0901: KLGEQWVQGL VEGDYSSLSI EERLNALVAL IGIAIEGNTI RISLEERLEV ASALKKQMWS EVQLDKRWKE ESLIRANYLS YPTPKTQESP SASQDPLSLP
1001: QIDVAAGPSL QLQENVSGME NLQYHHQQSY TADRERPRAE LKAYVGYKAE ELYVYRSLPL GLDRRRNRYW RFSASASRND PGCGRIFVEL QDGRWRLIDS
1101: EEGFDCLVKS LDVRGVRESH LHFMLLKMEA SFKEAVRRNV ETSTDLDTDT AEISSTFKIE LGDGGRSGVL QRFQSFERWM WDNMVHPGAL SAFKYGAKKS
1201: TPLFHICRSC AELHFAVDVC CPGCGQMMMS GGLDVSEMCF ADQVAQLGEI SRRDAGFILR GSNLSPLRIR LLKIQLALVE ASLPPEGLQT HWTESLRKTW
1301: GLKLLSSSSP EELHQVLAML EVALKKDFLS SNFETTCELL DLSEEALLRD VKVVPWIPKT TGGVALRLFE LDSSIAYTPD QNKDPQKDKE SEDFVGLETS
1401: FLRNVQETDV IEATPVQVAY AQEDTEPGSG RGRPPRGRGR PRSQRGKKPS PASGKPPRSA ANSNGEPMLR PRAQPRGGRK KGRRSSGTRT RPTKGTLGIS
1501: NEVGVGGGGR RGKEVNVNAK TALHDWVVET PDDDGEASSS GRSFQYDDDV MAPVDDFGES SKLVGRGEFS LHSDDEYEEE DMDTKMNVDD EDEDYINEED
1601: SDGGREQATE MISMDDAAAS QRRFPFEDPD LTSSSSSDFQ
0001: MEGGSEKTTP EGCGGESKSK RKMKTAAQLE VLENTYSAEP YPSEAIRADL SVKLNLSDRQ LQMWFCHRRL KERKSTTPSK RQRKELVTPT AMESWEPPVN
0101: AGDLVAGNEL DSRRAARGSG GSGVTVVRRF NEPSSAEVRA IGYVEAQLGE RLRDNGPVLG MEFDPLPPGA FGMPIEMPSH RKATRQAFET NIYVRSDVKP
0201: IKDHVRPIRE YQFIPELPSS RTDHSERVSP SHHFGVPLDG SVMRVSAVSA GHRDDYKISP QIPNLNLATH QGKPGHVYSP NLVEYDSPYQ KSYMDTAAQV
0301: HDDPFVKSER EVGNEDEDDD ALQLERHRKN EEARIAREVE AHEKRIRREL EKQDMLRRKR EEQIRKEMER QDRERRKEEE RLLREKQREE ERYLKEQMRE
0401: LQRREKFLKK ETIRAEKMRQ KEEMRKEKEV ARLKAANERA IARKIAKESM ELIEDERLEL MEVAALTKGL PSMLALDFET LQNLDEYRDK QAIFPPTSVK
0501: LKKPFAVKPW NGSDENVANL LMVWRFLITF ADVLGLWPFT LDEFAQAFHD YDPRLMGEIH IVLLKTIIKD IEGVVRTLST GVGANQNVAA NPGGGHPHVV
0601: EGAYAWGFDI RSWRKNLNVF TWPEILRQLA LSAGLGPQLK KMNIRTVSVH DDNEANNSEN VIFNLRKGVA AENAFAKMQE RGLSNPRRSR HRLTPGTVKF
0701: AAFHVLSLEG EKGLNILEVA EKIQKSGLRD LTTSRTPEAS VAAALSRDTK LFERVAPSTY CVRASYRKDA GDAETIFAEA RERIRAFKSG ITDVEDVDDA
0801: ERDEDSESDV GEDPEVDVNL KKEDPNPLKV ENLIGVEPLL ENGKLDTVPM KTELGLPLTP SLPEEMKDEK RDDTLADQSL EDAVANGEDS ACFDESKLGE
0901: QWVQGLVEGD YSNLSSEERL NALVALIGIA TEGNTIRIAL EERLEVASAL KKQMWGEVQL DKRWKEESLI RANYLSYPTA KPGLNIATPA SGNQESSSAD
1001: VTPISSQDPV SLPQIDVNNV IAGPSLQLQE NVPGVENLQY QQQQGYTADR ERLRAQLKAY VGYKAEELYV YRSLPLGQDR RRNRYWRFSA SASRNDPGCG
1101: RIFVELQDGR WRLIDSEEAF DYLVKSLDVR GVRESHLHFM LLKIEASFKE ALRRNVAANP GVCSISSSLD SDTAEISTTF KIELGDSNAV ERCSVLQRFH
1201: SFEKWMWDNM LHPSALSAFK YGAKQSSPLF RICRICAELH FVGDICCPSC GQMHAGPDVG ELCFAEQVAQ LGDNLRRGDT GFILRSSILS PLRIRLLKVQ
1301: LALVEASLPP EGLEAFWTEN LRKSWGMKLL SSSSHEDLYQ VLTTLEAALK RDFLSSNFET TSELLGLQEG ALASDLTCGV NVLPWIPKTA GGVALRLFDF
1401: DSSIVYTPDQ NNDPLKDKES EDFVGLETNI LRNLHEKDVM ETPVQVAAYK QEENWTDPGL GGVSSSGRGG RPPRGRGRPR ARGNGKKPAV SVKPPRGAAN
1501: SNGETMLRPR AQPRGGRKNG RRSGTKGRKR PTQGTLGICN EVGGGRRVKE VAVTAKTSLP DNDDDWIETP ELQDDDGEAS SSGRSFQYED YDDDDVMAPI
1601: DDFDGGGESS KLVGRGEFSL HSDDEYEEEE EEEEDMNMKM DVNVVDDEDE DYINEDSYGR KQHGISISND AATRKRFNKF EDPDLTSSSS SDFQ
0101: AGDLVAGNEL DSRRAARGSG GSGVTVVRRF NEPSSAEVRA IGYVEAQLGE RLRDNGPVLG MEFDPLPPGA FGMPIEMPSH RKATRQAFET NIYVRSDVKP
0201: IKDHVRPIRE YQFIPELPSS RTDHSERVSP SHHFGVPLDG SVMRVSAVSA GHRDDYKISP QIPNLNLATH QGKPGHVYSP NLVEYDSPYQ KSYMDTAAQV
0301: HDDPFVKSER EVGNEDEDDD ALQLERHRKN EEARIAREVE AHEKRIRREL EKQDMLRRKR EEQIRKEMER QDRERRKEEE RLLREKQREE ERYLKEQMRE
0401: LQRREKFLKK ETIRAEKMRQ KEEMRKEKEV ARLKAANERA IARKIAKESM ELIEDERLEL MEVAALTKGL PSMLALDFET LQNLDEYRDK QAIFPPTSVK
0501: LKKPFAVKPW NGSDENVANL LMVWRFLITF ADVLGLWPFT LDEFAQAFHD YDPRLMGEIH IVLLKTIIKD IEGVVRTLST GVGANQNVAA NPGGGHPHVV
0601: EGAYAWGFDI RSWRKNLNVF TWPEILRQLA LSAGLGPQLK KMNIRTVSVH DDNEANNSEN VIFNLRKGVA AENAFAKMQE RGLSNPRRSR HRLTPGTVKF
0701: AAFHVLSLEG EKGLNILEVA EKIQKSGLRD LTTSRTPEAS VAAALSRDTK LFERVAPSTY CVRASYRKDA GDAETIFAEA RERIRAFKSG ITDVEDVDDA
0801: ERDEDSESDV GEDPEVDVNL KKEDPNPLKV ENLIGVEPLL ENGKLDTVPM KTELGLPLTP SLPEEMKDEK RDDTLADQSL EDAVANGEDS ACFDESKLGE
0901: QWVQGLVEGD YSNLSSEERL NALVALIGIA TEGNTIRIAL EERLEVASAL KKQMWGEVQL DKRWKEESLI RANYLSYPTA KPGLNIATPA SGNQESSSAD
1001: VTPISSQDPV SLPQIDVNNV IAGPSLQLQE NVPGVENLQY QQQQGYTADR ERLRAQLKAY VGYKAEELYV YRSLPLGQDR RRNRYWRFSA SASRNDPGCG
1101: RIFVELQDGR WRLIDSEEAF DYLVKSLDVR GVRESHLHFM LLKIEASFKE ALRRNVAANP GVCSISSSLD SDTAEISTTF KIELGDSNAV ERCSVLQRFH
1201: SFEKWMWDNM LHPSALSAFK YGAKQSSPLF RICRICAELH FVGDICCPSC GQMHAGPDVG ELCFAEQVAQ LGDNLRRGDT GFILRSSILS PLRIRLLKVQ
1301: LALVEASLPP EGLEAFWTEN LRKSWGMKLL SSSSHEDLYQ VLTTLEAALK RDFLSSNFET TSELLGLQEG ALASDLTCGV NVLPWIPKTA GGVALRLFDF
1401: DSSIVYTPDQ NNDPLKDKES EDFVGLETNI LRNLHEKDVM ETPVQVAAYK QEENWTDPGL GGVSSSGRGG RPPRGRGRPR ARGNGKKPAV SVKPPRGAAN
1501: SNGETMLRPR AQPRGGRKNG RRSGTKGRKR PTQGTLGICN EVGGGRRVKE VAVTAKTSLP DNDDDWIETP ELQDDDGEAS SSGRSFQYED YDDDDVMAPI
1601: DDFDGGGESS KLVGRGEFSL HSDDEYEEEE EEEEDMNMKM DVNVVDDEDE DYINEDSYGR KQHGISISND AATRKRFNKF EDPDLTSSSS SDFQ
Arabidopsis Description
RLT2Homeobox-DDT domain protein RLT2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFH1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.