Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d039002_P019 | Maize | nucleus, plastid | 72.72 | 74.51 |
| Os05t0562400-01 | Rice | nucleus | 49.49 | 66.5 |
| TraesCS1D01G403700.1 | Wheat | nucleus | 60.74 | 61.56 |
| TraesCS1B01G424100.1 | Wheat | nucleus | 60.84 | 61.3 |
| TraesCS1A01G395600.1 | Wheat | nucleus | 60.63 | 61.22 |
| HORVU1Hr1G087180.1 | Barley | nucleus | 60.2 | 60.85 |
| Zm00001d043915_P002 | Maize | nucleus | 40.54 | 59.87 |
| Zm00001d011560_P012 | Maize | nucleus | 54.61 | 55.08 |
| Zm00001d025550_P001 | Maize | nucleus | 11.19 | 51.85 |
| GSMUA_Achr9P06610_001 | Banana | nucleus | 48.38 | 51.21 |
| VIT_10s0003g00290.t01 | Wine grape | nucleus | 19.07 | 50.14 |
| GSMUA_Achr8P27210_001 | Banana | nucleus | 50.88 | 50.03 |
| VIT_12s0028g03090.t01 | Wine grape | nucleus | 38.73 | 47.7 |
| Zm00001d043914_P001 | Maize | nucleus | 13.91 | 46.36 |
| KRH21359 | Soybean | nucleus | 41.02 | 43.87 |
| Solyc07g053610.2.1 | Tomato | nucleus | 40.76 | 42.93 |
| CDY35748 | Canola | nucleus | 35.32 | 42.83 |
| KRH55891 | Soybean | nucleus | 40.49 | 42.67 |
| Bra010869.1-P | Field mustard | nucleus | 35.48 | 42.42 |
| KRH50116 | Soybean | nucleus | 40.22 | 42.37 |
| CDX90154 | Canola | nucleus | 35.48 | 42.34 |
| KRH20389 | Soybean | nucleus | 40.38 | 42.2 |
| CDY22305 | Canola | nucleus | 36.17 | 41.43 |
| Bra033725.1-P | Field mustard | nucleus | 36.07 | 41.28 |
| AT5G44180.1 | Thale cress | nucleus | 37.08 | 41.09 |
| Solyc02g077660.2.1 | Tomato | nucleus | 36.6 | 40.94 |
| CDX94760 | Canola | nucleus | 36.23 | 40.82 |
| CDY34099 | Canola | nucleus | 36.17 | 40.78 |
| GSMUA_Achr6P26980_001 | Banana | nucleus | 48.75 | 40.78 |
| Bra032908.1-P | Field mustard | nucleus | 36.07 | 40.73 |
| CDY65661 | Canola | nucleus | 36.17 | 40.61 |
| VIT_10s0003g00270.t01 | Wine grape | nucleus | 24.13 | 40.41 |
| AT1G28420.1 | Thale cress | nucleus | 36.55 | 40.23 |
| Zm00001d034515_P002 | Maize | nucleus | 15.13 | 24.11 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:103635335 | MapMan:15.5.3.7 | UniProt:A0A1D6FK08 | ProteinID:AQK92110.1 | ncoils:Coil |
| InterPro:DDT_dom | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:HB1/Asxl_HTH | InterPro:Homeobox-like_sf |
| InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR018501 | PFAM:PF00046 | PFAM:PF02791 | PFAM:PF05066 |
| PFAM:PF15612 | PFAM:PF15613 | PFscan:PS50071 | PFscan:PS50827 | SMART:SM00389 | SMART:SM00571 |
| SUPFAM:SSF46689 | UniParc:UPI000843358D | InterPro:WHIM1_dom | InterPro:WHIM2_dom | EnsemblPlantsGene:Zm00001d009562 | EnsemblPlants:Zm00001d009562_P007 |
| EnsemblPlants:Zm00001d009562_T007 | SEG:seg | : | : | : | : |
Description
Homeobox-transcription factor 29Putative homeodomain-like transcription factor superfamily protein
Coordinates
chr8:+:70193617..70205810
Molecular Weight (calculated)
208898.0 Da
IEP (calculated)
5.166
GRAVY (calculated)
-0.744
Length
1877 amino acids
Sequence
(BLAST)
(BLAST)
0001: MESSDDGGSG PAAGSPGPPS APAAVGGASS APGASGSGGK PPVKRVMKTP YQLEVLERTY AEDSYPNETK RAELSVQLNL TDRQLQMWFC HRRLKDRKPP
0101: AKRQLRDEEV SVPVIGPPPP VLPPPLPPSE MMVGTVGTYG EQLLPYSRRG SGRLSAAPRL SVPEIGRRYY EPPQVMLPHM APVHLMQAEH RVIDSVEALI
0201: GEPLRDDGPV LGIEFDPLPP GAFGAPIVPE QPRQPFRSYE TKMFSGPKTM KASAILPTTD PLLQNTGKRK SFIGSSHLGS QAVHEYQFLP EQPSDTYERA
0301: SQSHFYDSSA EASNLRVAPL STGSRFLHGV EQAPSYTFHS QSSGSSHLTQ RGSGRSPIAS ALTDHEGALS NINASTTPIH GQLGIPQVAG FESPLASPER
0401: LGYHDEDTYH MDRKRKHNEE AKIAREVEAH EKRIRKELEK QDLLNRKREE QMRREMERHD RERRKEEERL MRERQREEEK FQREQRREHK RMEKFMQKQS
0501: IRAEKLRQRE ELRREKEAAR QKAANERATA RRIARESMEL MEDERLELLE LASRSKGLPS MVSLDSDTLQ QLDSFRGMLG KFPPETVRLK VPFSIKPWAA
0601: SEDIIGNLLM AWKFFVTFGD VLGLPSFTLD EFVQALHDYD SRLLGELHVS LLKSVIKDIE DVARTPSVAL GVNQSSSANP GGGHPQIVEG AYAWGINILN
0701: WQRHLNFLTW PEILRQFGLC AGFGPQLKKS DAEIVHHRDD NEGRNGVDVI SILRNGSAAV KAAALMKERG YTNRRRSRHR LTPGTVKFAA FHVLSLEGSK
0801: GLTILEVAEK IQKSGLRDLT TSKTPEASIS AALSRDTKLF ERTAPSTYCV KTPYRKDPDD SEAVLAAARE KIRAFQNALP ECEEVEKDVD EAERDDDSEC
0901: DDADDDADGD DVNIEDKDAK SPLVGAQYGA QITVVGDIKK ESNIVMNTSV PPSIQIKSSA SVPFHTLDSK ASSSTDPEVG DDAKDIEIDE SNQGESWVQG
1001: LAEGDYCDLS VDERLNALVA LIAVANEGNS IRAILEERLE AASALKKQLW AEAQLDKRRI RDDFTSKMQY DSYVSMKVDT DQENNAAEIT LTPVHDPIKN
1101: NNGNANLMNN GLLVDKQNQL TTGDVYHQRN GASRESSTNA ESLSVQQYAS SEKTRSQLKS FIGHKAEQLY VYRSLPLGQD RRRNRYWQFS ASSSSYDPGS
1201: GRIFFESRDG YWRVIDTSEA FEALVASLDT RGIRESHLHS ILQSIEPTFK EAVERKRCAN LEHPTGRTSE NGSNESPNCN NEFGSPCSTL SGVASDNLMA
1301: HSDIFKIEVG RNEAEKNSIS KRASVFLKWI WRECYSHQST YAMRYGKKRC PELIHSCDYC YQIYLAEERH CSCHKTFKHI HNFLEHSSQC EEKQRTDPNW
1401: KMQTVDLSVP VGLRLLRLLL ATIEALVPAE ALLPFWTDGY RKSWGAKLYS ASSAEEVLQV ALHAFCSFVY CIIPVADLCI NFVCVSKSYH VIYLQMLSVL
1501: ESAIKRDYLS SNFETTTELL NSSTQDFATQ NSAGGSGSAT ALPWVPDTTA AVALRLLDLD ASISYTLHPK LGSNKEQESG DFMKLPPRYP SMNKGKQEIE
1601: QFRPIGFDQQ DGTLLPNSNG RRGRGRGGRG GSRGGRSRGH GGRVPRGIGS SSRIQFRDDN SMLYGRAPRK NARGGRGRGR GRGRGLRTVR PRQPSELSAR
1701: SIPKANLLGS FSMLSKTNHT GTTHSPESSG AEEWAFERRE YVKDDENNLV SQSDESEENV EPMNEEYGEH ISGYPRDNSD SRPVQMMGDG SDDNDEDAEG
1801: DEGEEDGEDY EAEDPGDEDD DVEMDGDDDV EVDEDDDIEM DGDDDIEDDD DDDGGDGAAN GDEDGGGTSS YSSEYSE
0101: AKRQLRDEEV SVPVIGPPPP VLPPPLPPSE MMVGTVGTYG EQLLPYSRRG SGRLSAAPRL SVPEIGRRYY EPPQVMLPHM APVHLMQAEH RVIDSVEALI
0201: GEPLRDDGPV LGIEFDPLPP GAFGAPIVPE QPRQPFRSYE TKMFSGPKTM KASAILPTTD PLLQNTGKRK SFIGSSHLGS QAVHEYQFLP EQPSDTYERA
0301: SQSHFYDSSA EASNLRVAPL STGSRFLHGV EQAPSYTFHS QSSGSSHLTQ RGSGRSPIAS ALTDHEGALS NINASTTPIH GQLGIPQVAG FESPLASPER
0401: LGYHDEDTYH MDRKRKHNEE AKIAREVEAH EKRIRKELEK QDLLNRKREE QMRREMERHD RERRKEEERL MRERQREEEK FQREQRREHK RMEKFMQKQS
0501: IRAEKLRQRE ELRREKEAAR QKAANERATA RRIARESMEL MEDERLELLE LASRSKGLPS MVSLDSDTLQ QLDSFRGMLG KFPPETVRLK VPFSIKPWAA
0601: SEDIIGNLLM AWKFFVTFGD VLGLPSFTLD EFVQALHDYD SRLLGELHVS LLKSVIKDIE DVARTPSVAL GVNQSSSANP GGGHPQIVEG AYAWGINILN
0701: WQRHLNFLTW PEILRQFGLC AGFGPQLKKS DAEIVHHRDD NEGRNGVDVI SILRNGSAAV KAAALMKERG YTNRRRSRHR LTPGTVKFAA FHVLSLEGSK
0801: GLTILEVAEK IQKSGLRDLT TSKTPEASIS AALSRDTKLF ERTAPSTYCV KTPYRKDPDD SEAVLAAARE KIRAFQNALP ECEEVEKDVD EAERDDDSEC
0901: DDADDDADGD DVNIEDKDAK SPLVGAQYGA QITVVGDIKK ESNIVMNTSV PPSIQIKSSA SVPFHTLDSK ASSSTDPEVG DDAKDIEIDE SNQGESWVQG
1001: LAEGDYCDLS VDERLNALVA LIAVANEGNS IRAILEERLE AASALKKQLW AEAQLDKRRI RDDFTSKMQY DSYVSMKVDT DQENNAAEIT LTPVHDPIKN
1101: NNGNANLMNN GLLVDKQNQL TTGDVYHQRN GASRESSTNA ESLSVQQYAS SEKTRSQLKS FIGHKAEQLY VYRSLPLGQD RRRNRYWQFS ASSSSYDPGS
1201: GRIFFESRDG YWRVIDTSEA FEALVASLDT RGIRESHLHS ILQSIEPTFK EAVERKRCAN LEHPTGRTSE NGSNESPNCN NEFGSPCSTL SGVASDNLMA
1301: HSDIFKIEVG RNEAEKNSIS KRASVFLKWI WRECYSHQST YAMRYGKKRC PELIHSCDYC YQIYLAEERH CSCHKTFKHI HNFLEHSSQC EEKQRTDPNW
1401: KMQTVDLSVP VGLRLLRLLL ATIEALVPAE ALLPFWTDGY RKSWGAKLYS ASSAEEVLQV ALHAFCSFVY CIIPVADLCI NFVCVSKSYH VIYLQMLSVL
1501: ESAIKRDYLS SNFETTTELL NSSTQDFATQ NSAGGSGSAT ALPWVPDTTA AVALRLLDLD ASISYTLHPK LGSNKEQESG DFMKLPPRYP SMNKGKQEIE
1601: QFRPIGFDQQ DGTLLPNSNG RRGRGRGGRG GSRGGRSRGH GGRVPRGIGS SSRIQFRDDN SMLYGRAPRK NARGGRGRGR GRGRGLRTVR PRQPSELSAR
1701: SIPKANLLGS FSMLSKTNHT GTTHSPESSG AEEWAFERRE YVKDDENNLV SQSDESEENV EPMNEEYGEH ISGYPRDNSD SRPVQMMGDG SDDNDEDAEG
1801: DEGEEDGEDY EAEDPGDEDD DVEMDGDDDV EVDEDDDIEM DGDDDIEDDD DDDGGDGAAN GDEDGGGTSS YSSEYSE
0001: MEMGSDGEDQ KIRSVVGDAN LNNKKKKIDN NSSSKDGRVK PKRQMKTPFQ LETLEKVYSE EKYPSEATRA ELSEKLDLSD RQLQMWFCHR RLKDKKDGQS
0101: NKPVKSSVAA VQSASVNELP AAAGSVPEQD SRSDSGSESG CSPYSNSRRN FASGSSSSRA ELDEYETMGK PSYESRLSTM VHRAIVCIEA QLGEPLRDDG
0201: PILGMEFDPL PPGAFGTPIA MQKHLLHPYE SDLYERHDPR PRRSHAAARS FHEQQSLDDP SSFTPNMYER YSENHARGMD YEVARSRISS FMHANGPVPR
0301: SYVTPGHASR NCSTSQQDMP SPIESAHHGD RFLLEKDSSV LGTEDPYLLP DGVRKSSDVH RKGKINDGRL GRGSETRENH GPKDLEKLEI QRKKNEERMR
0401: KEMERNERER RKEEERLMRE RIKEEERLQR EQRREVERRE KFLQRENERA EKKKQKDEIR REKDAIRRKL AIEKATARRI AKESMDLIED EQLELMELAA
0501: ISKGLPSVLQ LDHDTLQNLE VYRDSLSTFP PKSLQLKMPF AISPWKDSDE TVGNLLMVWR FLISFSDVLD LWPFTLDEFI QAFHDYDSRL LGEIHVTLLR
0601: SIIRDVEDVA RTPFSGIGNN QYTTANPEGG HPQIVEGAYA WGFDIRSWKK HLNPLTWPEI LRQLALSAGF GPKLKKKHSR LTNTGDKDEA KGCEDVISTI
0701: RNGTAAESAF ASMREKGLLA PRKSRHRLTP GTVKFAAFHV LSLEGSKGLT VLELADKIQK SGLRDLTTSK TPEASISVAL TRDVKLFERI APSTYCVRAP
0801: YVKDPKDGEA ILADARKKIR AFENGFTGPE DVNDLERDED FEIDIDEDPE VDDLATLASA SKSAVLGEAN VLSGKGVDTM FCDVKADVKS ELEKEFSSPP
0901: PSTMKSIVPQ HSERHKNTVV GGVDAVIDES NQGQSWIQGL TEGDYCHLSV EERLNALVAL VGIANEGNSI RTGLEDRMEA ANALKKQMWA EAQLDNSCMR
1001: DVLKLDLQNL ASSKTESTIG LPIIQSSTRE RDSFDRDPSQ LLDETKPLED LSNDLHKSSA ERALINQDAN ISQENYASKR SRSQLKSYIG HKAEEVYPYR
1101: SLPLGQDRRH NRYWHFAVSV SKSDPCSRLL FVELHDGKWL LIDSEEAFDI LVASLDMRGI RESHLRIMLQ KIEGSFKENA CKDIKLARNP FLTEKSVVNH
1201: SPTDSVSPSS SAISGSNSDS METSTSIRVD LGRNDTENKN LSKRFHDFQR WMWTETYSSL PSCARKYGKK RSELLATCDA CVASYLSEYT FCSSCHQRLD
1301: VVDSSEILDS GLAVSPLPFG VRLLKPLLVF LEASVPDEAL ESFWTEDQRK KWGFRLNTSS SPGELLQVLT SLESAIKKES LSSNFMSAKE LLGAANAEAD
1401: DQGSVDVLPW IPKTVSAVAL RLSELDASII YVKPEKPEVI PEDENEQISL FPRDSPFKGK GPREQEDQDE VAPNPGNRNK KRARVSLGSG SNRKVKRKKA
1501: QSGLNKFVVG RRNVAVNSNL MAVELNHQVP GKGKRTVRKR PERIDEDNSH LVNRMANIVR PKSEEVEEDE EEEEQTFRDI NEDWAAGETP REMEEDWANE
1601: TPNRMMTPMQ VDDESDNSVG VESEDEDGGG QFVDYSQRNK WGLDWNSNLN VAIEEDEEEE VVGVGRVEGE DDAEMSESSE DDDVPANNAA NNYDRESEGY
1701: SSSDS
0101: NKPVKSSVAA VQSASVNELP AAAGSVPEQD SRSDSGSESG CSPYSNSRRN FASGSSSSRA ELDEYETMGK PSYESRLSTM VHRAIVCIEA QLGEPLRDDG
0201: PILGMEFDPL PPGAFGTPIA MQKHLLHPYE SDLYERHDPR PRRSHAAARS FHEQQSLDDP SSFTPNMYER YSENHARGMD YEVARSRISS FMHANGPVPR
0301: SYVTPGHASR NCSTSQQDMP SPIESAHHGD RFLLEKDSSV LGTEDPYLLP DGVRKSSDVH RKGKINDGRL GRGSETRENH GPKDLEKLEI QRKKNEERMR
0401: KEMERNERER RKEEERLMRE RIKEEERLQR EQRREVERRE KFLQRENERA EKKKQKDEIR REKDAIRRKL AIEKATARRI AKESMDLIED EQLELMELAA
0501: ISKGLPSVLQ LDHDTLQNLE VYRDSLSTFP PKSLQLKMPF AISPWKDSDE TVGNLLMVWR FLISFSDVLD LWPFTLDEFI QAFHDYDSRL LGEIHVTLLR
0601: SIIRDVEDVA RTPFSGIGNN QYTTANPEGG HPQIVEGAYA WGFDIRSWKK HLNPLTWPEI LRQLALSAGF GPKLKKKHSR LTNTGDKDEA KGCEDVISTI
0701: RNGTAAESAF ASMREKGLLA PRKSRHRLTP GTVKFAAFHV LSLEGSKGLT VLELADKIQK SGLRDLTTSK TPEASISVAL TRDVKLFERI APSTYCVRAP
0801: YVKDPKDGEA ILADARKKIR AFENGFTGPE DVNDLERDED FEIDIDEDPE VDDLATLASA SKSAVLGEAN VLSGKGVDTM FCDVKADVKS ELEKEFSSPP
0901: PSTMKSIVPQ HSERHKNTVV GGVDAVIDES NQGQSWIQGL TEGDYCHLSV EERLNALVAL VGIANEGNSI RTGLEDRMEA ANALKKQMWA EAQLDNSCMR
1001: DVLKLDLQNL ASSKTESTIG LPIIQSSTRE RDSFDRDPSQ LLDETKPLED LSNDLHKSSA ERALINQDAN ISQENYASKR SRSQLKSYIG HKAEEVYPYR
1101: SLPLGQDRRH NRYWHFAVSV SKSDPCSRLL FVELHDGKWL LIDSEEAFDI LVASLDMRGI RESHLRIMLQ KIEGSFKENA CKDIKLARNP FLTEKSVVNH
1201: SPTDSVSPSS SAISGSNSDS METSTSIRVD LGRNDTENKN LSKRFHDFQR WMWTETYSSL PSCARKYGKK RSELLATCDA CVASYLSEYT FCSSCHQRLD
1301: VVDSSEILDS GLAVSPLPFG VRLLKPLLVF LEASVPDEAL ESFWTEDQRK KWGFRLNTSS SPGELLQVLT SLESAIKKES LSSNFMSAKE LLGAANAEAD
1401: DQGSVDVLPW IPKTVSAVAL RLSELDASII YVKPEKPEVI PEDENEQISL FPRDSPFKGK GPREQEDQDE VAPNPGNRNK KRARVSLGSG SNRKVKRKKA
1501: QSGLNKFVVG RRNVAVNSNL MAVELNHQVP GKGKRTVRKR PERIDEDNSH LVNRMANIVR PKSEEVEEDE EEEEQTFRDI NEDWAAGETP REMEEDWANE
1601: TPNRMMTPMQ VDDESDNSVG VESEDEDGGG QFVDYSQRNK WGLDWNSNLN VAIEEDEEEE VVGVGRVEGE DDAEMSESSE DDDVPANNAA NNYDRESEGY
1701: SSSDS
Arabidopsis Description
RLT1Homeobox-DDT domain protein RLT1 [Source:UniProtKB/Swiss-Prot;Acc:F4HY56]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.