Factsheet for Zm00001d021546_P003

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

extracellular: 20408568
mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG36268	Sorghum	mitochondrion	98.71	98.23
Os07t0496200-01	Rice	mitochondrion	92.89	92.44
TraesCS2D01G234500.3	Wheat	mitochondrion	92.41	91.81
TraesCS2B01G256800.1	Wheat	mitochondrion, unclear	92.25	91.65
TraesCS2A01G237000.1	Wheat	mitochondrion	92.08	91.49
HORVU2Hr1G050980.2	Barley	mitochondrion, plastid	92.08	86.76
KRH66385	Soybean	mitochondrion	80.94	80.55
VIT_15s0021g00500.t01	Wine grape	mitochondrion	81.1	80.32
GSMUA_Achr7P06830_001	Banana	mitochondrion	81.1	79.94
Bra037210.1-P	Field mustard	mitochondrion	78.68	78.8
CDY37211	Canola	mitochondrion	78.68	78.8
Solyc08g013860.2.1	Tomato	plastid	79.64	78.75
CDX81448	Canola	mitochondrion	78.51	78.64
AT2G13560.1	Thale cress	mitochondrion	78.68	78.17
Zm00001d013911_P001	Maize	mitochondrion	60.74	58.75
Zm00001d037693_P003	Maize	extracellular	39.1	42.46
Zm00001d012764_P001	Maize	cytosol	33.93	42.25
Zm00001d010358_P001	Maize	cytosol	38.61	41.93
Zm00001d000316_P001	Maize	plastid	36.83	37.81
Zm00001d037962_P003	Maize	plastid	39.26	37.73
Zm00001d037961_P004	Maize	plastid	39.1	37.58
Zm00001d043601_P003	Maize	mitochondrion	38.61	35.99
Zm00001d036873_P001	Maize	cytosol	2.75	34.0
Zm00001d034292_P001	Maize	cytosol	14.54	32.85
Zm00001d042392_P001	Maize	plastid	10.34	24.81
Zm00001d003090_P001	Maize	mitochondrion	8.56	15.54
Zm00001d051182_P001	Maize	cytosol	4.2	11.76

Protein Annotations

EntrezGene:100191942	MapMan:2.3.9	Gene3D:3.40.50.10380	Gene3D:3.40.50.720	EMBL:BT064127	EMBL:BT064172
UniProt:C0P758	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004470	GO:GO:0004471
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0051287
GO:GO:0055114	InterPro:IPR037062	InterPro:Malic_NAD-bd	InterPro:Malic_N_dom	InterPro:Malic_N_dom_sf	InterPro:Malic_OxRdtase
InterPro:Malic_enzyme_CS	InterPro:NAD(P)-bd_dom_sf	ProteinID:ONM57458.1	PFAM:PF00390	PFAM:PF03949	PIRSF:PIRSF000106
PRINTS:PR00072	ScanProsite:PS00331	PANTHER:PTHR23406	PANTHER:PTHR23406:SF53	SMART:SM00919	SMART:SM01274
SUPFAM:SSF51735	SUPFAM:SSF53223	UniParc:UPI0001948C19	EnsemblPlantsGene:Zm00001d021546	EnsemblPlants:Zm00001d021546_P003	EnsemblPlants:Zm00001d021546_T003
SEG:seg	:	:	:	:	:

Description

Malic enzyme

Coordinates

chr7:-:155518832..155528949

Molecular Weight (calculated)

69138.0 Da

IEP (calculated)

6.460

GRAVY (calculated)

-0.251

Length

619 amino acids

Sequence
(BLAST)

001: MSSISRNLRR SLAPDRLRRL SQHPREYVTS ECHRPVVLHK RGPDILHDPW FNRGTAFSMT ERDRLGLRGL LPPNVVSSQQ QIDRFMLDLK RLQRYARDGP
101: SDTYPLAKWR ILNRLHDRNE TMYYKVLIDN IEEYAPIVYT PTVGLVCQNY SGLFRRPRGM YFSAEDRGEM MSMVYNWPAD QVDMIVVTDG SRILGLGDLG
201: VHGIGIAIGK LDLYVAAAGI NPQRVLPVMI DVGTNNEKLL KDPLYLGLQE HRLEGDEYVS VIDEFMEAVF TRWPNVIVQF EDFQSKWAFR LLQRYRKTYR
301: MFNDDVQGTA GVAIAGLLGA VRAQGRPMID FPKQRIVVAG AGSAGIGVVN AASRTMARML GNNDVAFESA RSQFWIVDAH GLITEDREDI DPDARPFARR
401: KSELGHQGLS EGASLVEVVK KVKPDVILGL SAVGGLFSKE VLEALKDSSS SRPAIFAMSN PTKNAECTPG EAFSILGEKV IFASGSPFHD VDLGDGKIGH
501: SNQGNNMYLF PGIGLGTLLS GARVISDGML QAAAERLASY MKEEEVLEGI IYPPISRIRD ITKEVAAAVV REAVAEDLAE GYRDMDAREL ARLSEEETNE
601: YVKTNMWSPV YPTIIYKKD

Best Arabidopsis Sequence Match ( AT2G13560.1 )
(BLAST)

001: MGIANKLRLS SSSLSRILHR RILYSSAVRS FTTSEGHRPT IVHKQGLDIL HDPWFNKGTA FTMTERNRLD LRGLLPPNVM DSEQQIFRFM TDLKRLEEQA
101: RDGPSDPNAL AKWRILNRLH DRNETMYYKV LINNIEEYAP IVYTPTVGLV CQNYSGLFRR PRGMYFSAED RGEMMSMVYN WPAEQVDMIV VTDGSRILGL
201: GDLGVHGIGI AVGKLDLYVA AAGINPQRVL PVMIDVGTNN EKLRNDPMYL GLQQRRLEDD DYIDVIDEFM EAVYTRWPHV IVQFEDFQSK WAFKLLQRYR
301: CTYRMFNDDV QGTAGVAIAG LLGAVRAQGR PMIDFPKMKI VVAGAGSAGI GVLNAARKTM ARMLGNTETA FDSAQSQFWV VDAQGLITEG RENIDPEAQP
401: FARKTKEMER QGLKEGATLV EVVREVKPDV LLGLSAVGGL FSKEVLEAMK GSTSTRPAIF AMSNPTKNAE CTPQDAFSIL GENMIFASGS PFKNVEFGNG
501: HVGHCNQGNN MYLFPGIGLG TLLSGAPIVS DGMLQAASEC LAAYMSEEEV LEGIIYPPIS RIRDITKRIA AAVIKEAIEE DLVEGYREMD AREIQKLDEE
601: GLMEYVENNM WNPEYPTLVY KDD

Arabidopsis Description

NAD-ME1NAD-dependent malic enzyme 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SIU0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.