Factsheet for HORVU2Hr1G050980.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid, mitochondrion

Predictor Summary:

plastid 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G234500.3	Wheat	mitochondrion	93.76	98.88
TraesCS2B01G256800.1	Wheat	mitochondrion, unclear	93.61	98.72
TraesCS2A01G237000.1	Wheat	mitochondrion	93.3	98.39
Zm00001d021546_P003	Maize	mitochondrion	86.76	92.08
KXG36268	Sorghum	mitochondrion	86.91	91.8
Os07t0496200-01	Rice	mitochondrion	86.61	91.48
KRH66385	Soybean	mitochondrion	76.56	80.87
VIT_15s0021g00500.t01	Wine grape	mitochondrion	76.86	80.8
GSMUA_Achr7P06830_001	Banana	mitochondrion	77.02	80.57
CDY37211	Canola	mitochondrion	74.28	78.96
Bra037210.1-P	Field mustard	mitochondrion	74.12	78.8
CDX81448	Canola	mitochondrion	74.12	78.8
Solyc08g013860.2.1	Tomato	plastid	75.04	78.75
AT2G13560.1	Thale cress	mitochondrion	73.52	77.53
HORVU1Hr1G045720.1	Barley	plastid	61.03	55.16
HORVU5Hr1G053200.1	Barley	endoplasmic reticulum, extracellular	4.87	49.23
HORVU1Hr1G028030.16	Barley	mitochondrion	36.68	39.25
HORVU3Hr1G070850.1	Barley	mitochondrion	36.07	38.04
HORVU3Hr1G068570.1	Barley	cytosol	2.59	35.42
HORVU3Hr1G068600.2	Barley	mitochondrion, plastid	36.68	34.09
HORVU3Hr1G019790.9	Barley	plastid	37.14	33.47
HORVU5Hr1G018620.1	Barley	cytosol	5.78	32.76
HORVU3Hr1G102340.13	Barley	plastid	6.39	17.5

Protein Annotations

MapMan:2.3.9	Gene3D:3.40.50.10380	Gene3D:3.40.50.720	UniProt:A0A287I007	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004470	GO:GO:0004471	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0051287	GO:GO:0055114	EnsemblPlantsGene:HORVU2Hr1G050980
EnsemblPlants:HORVU2Hr1G050980.2	InterPro:IPR037062	InterPro:Malic_NAD-bd	InterPro:Malic_N_dom	InterPro:Malic_N_dom_sf	InterPro:Malic_OxRdtase
InterPro:Malic_enzyme_CS	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00390	PFAM:PF03949	PIRSF:PIRSF000106	PRINTS:PR00072
ScanProsite:PS00331	PANTHER:PTHR23406	PANTHER:PTHR23406:SF53	SMART:SM00919	SMART:SM01274	SUPFAM:SSF51735
SUPFAM:SSF53223	UniParc:UPI000B47E225	SEG:seg	:	:	:

Description

Malic enzyme [Source:UniProtKB/TrEMBL;Acc:A0A287I007]

Coordinates

chrchr2H:+:296726543..296742185

Molecular Weight (calculated)

72926.6 Da

IEP (calculated)

6.626

GRAVY (calculated)

-0.232

Length

657 amino acids

Sequence
(BLAST)

001: SHITQKRLRL RVPFPTGRKE PASTAAGPTG TRSGMANALS ISRSLRRSLA PDAIYRLLLQ RSRAFVTAEC HRPVVLHKRG PDILHDPWFN RGTAFSMTER
101: DRLGLRGLLP PSVVSSQQQI DRFMGDLKRL EQNARDGPSD TYQLAKWRIL NRLHDRNETM YYKVLIDNIE EYAPIVYTPT VGAVCQNYSG LFRRPRGMYF
201: SAEDRGEMMS MVYNWPADQV DMIVVTDGSR ILGLGDLGVQ GIGIAIGKLD LYVAAAGINP QRVLPVMIDV GTNNEKLLKD PLYLGLQEHR LEGEEYVEII
301: DEFMEAVFSR WPNVIVQFED FQSKWAFRLL QRYRKTYRMF NDDVQGTAGV AIAGLLGAVR AQGRPMIDFP KQKIVVAGAG SAGIGVVNAA SRTMARMLGN
401: NEVAFESARS QFWIVDAHGL ITEERVEIDP DALPFARRKS ELTHQGLNEG ASLIEVVKKV KPDVILGLSA VGGLFSKEVL EALKDSSSSR PAIFAMSNPT
501: KNAECTPEEA FSIIGEKVIF SSGSPFDDVD LGDGKIGHSN QGNNMYLFPG IGLGTLLSGA RIVSDGMLQA AAERLASYMK EEEVLQGIIY PPTSRIRDIT
601: KEVAAAVVRE AVAEDLAEGY RDMDARELAR LSEEETVDYV KNNMWNPVYP TVVYKKD

Best Arabidopsis Sequence Match ( AT2G13560.1 )
(BLAST)

001: MGIANKLRLS SSSLSRILHR RILYSSAVRS FTTSEGHRPT IVHKQGLDIL HDPWFNKGTA FTMTERNRLD LRGLLPPNVM DSEQQIFRFM TDLKRLEEQA
101: RDGPSDPNAL AKWRILNRLH DRNETMYYKV LINNIEEYAP IVYTPTVGLV CQNYSGLFRR PRGMYFSAED RGEMMSMVYN WPAEQVDMIV VTDGSRILGL
201: GDLGVHGIGI AVGKLDLYVA AAGINPQRVL PVMIDVGTNN EKLRNDPMYL GLQQRRLEDD DYIDVIDEFM EAVYTRWPHV IVQFEDFQSK WAFKLLQRYR
301: CTYRMFNDDV QGTAGVAIAG LLGAVRAQGR PMIDFPKMKI VVAGAGSAGI GVLNAARKTM ARMLGNTETA FDSAQSQFWV VDAQGLITEG RENIDPEAQP
401: FARKTKEMER QGLKEGATLV EVVREVKPDV LLGLSAVGGL FSKEVLEAMK GSTSTRPAIF AMSNPTKNAE CTPQDAFSIL GENMIFASGS PFKNVEFGNG
501: HVGHCNQGNN MYLFPGIGLG TLLSGAPIVS DGMLQAASEC LAAYMSEEEV LEGIIYPPIS RIRDITKRIA AAVIKEAIEE DLVEGYREMD AREIQKLDEE
601: GLMEYVENNM WNPEYPTLVY KDD

Arabidopsis Description

NAD-ME1NAD-dependent malic enzyme 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SIU0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.