Factsheet for HORVU1Hr1G045720.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU7Hr1G060360.1
HORVU7Hr1G060410.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G00570.1	HORVU7Hr1G060360.1	AT2G18876.1	21798944
AT4G00570.1	HORVU7Hr1G060410.1	AT2G18876.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G164800.4	Wheat	mitochondrion, unclear	84.18	99.19
TraesCS1B01G190400.5	Wheat	mitochondrion	81.84	96.91
KXG38219	Sorghum	mitochondrion	77.17	90.78
Os10t0503500-01	Rice	mitochondrion	77.3	90.65
Zm00001d013911_P001	Maize	mitochondrion	73.31	83.28
GSMUA_Achr1P00210_001	Banana	mitochondrion	65.47	78.81
VIT_15s0046g03670.t01	Wine grape	mitochondrion	64.92	78.02
Solyc01g094200.2.1	Tomato	plastid	63.41	76.71
Bra037347.1-P	Field mustard	mitochondrion	61.76	76.49
KRH48207	Soybean	mitochondrion	63.27	76.16
KRH00689	Soybean	mitochondrion	62.72	76.0
CDY51151	Canola	mitochondrion	63.41	75.95
KRH65116	Soybean	mitochondrion	63.0	75.83
CDY68746	Canola	mitochondrion	63.0	75.7
CDY07209	Canola	mitochondrion	63.41	75.7
CDX74340	Canola	mitochondrion	63.0	75.33
KRH40505	Soybean	mitochondrion	61.76	74.71
AT4G00570.1	Thale cress	mitochondrion	62.04	74.3
Bra000967.1-P	Field mustard	mitochondrion	63.0	73.87
PGSC0003DMT400000066	Potato	mitochondrion	63.55	73.68
HORVU2Hr1G050980.2	Barley	mitochondrion, plastid	55.16	61.03
HORVU5Hr1G053200.1	Barley	endoplasmic reticulum, extracellular	4.54	50.77
HORVU3Hr1G068570.1	Barley	cytosol	2.75	41.67
HORVU1Hr1G028030.16	Barley	mitochondrion	32.32	38.27
HORVU3Hr1G070850.1	Barley	mitochondrion	32.74	38.2
HORVU3Hr1G068600.2	Barley	mitochondrion, plastid	33.42	34.37
HORVU3Hr1G019790.9	Barley	plastid	33.15	33.06
HORVU5Hr1G018620.1	Barley	cytosol	4.81	30.17
HORVU3Hr1G102340.13	Barley	plastid	4.95	15.0

Protein Annotations

Gene3D:1.20.1370.30	MapMan:2.3.9	Gene3D:3.40.50.10380	Gene3D:3.40.50.720	UniProt:A0A287FDW4	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004470	GO:GO:0004471	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0051287	GO:GO:0055114
EnsemblPlantsGene:HORVU1Hr1G045720	EnsemblPlants:HORVU1Hr1G045720.1	InterPro:IPR037062	InterPro:Malic_NAD-bd	InterPro:Malic_N_dom	InterPro:Malic_N_dom_sf
InterPro:Malic_OxRdtase	InterPro:Malic_enzyme_CS	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00390	PFAM:PF03949	PIRSF:PIRSF000106
PRINTS:PR00072	ScanProsite:PS00331	PANTHER:PTHR23406	PANTHER:PTHR23406:SF32	SMART:SM00919	SMART:SM01274
SUPFAM:SSF51735	SUPFAM:SSF53223	UniParc:UPI000B47A1E8	SEG:seg	:	:

Description

Malic enzyme [Source:UniProtKB/TrEMBL;Acc:A0A287FDW4]

Coordinates

chrchr1H:-:332740737..332751389

Molecular Weight (calculated)

80122.3 Da

IEP (calculated)

7.610

GRAVY (calculated)

-0.164

Length

727 amino acids

Sequence
(BLAST)

001: PVLCPHRECP HHAATTHSTP LEISLSLSLF LASPPRSSVS PHAPPTQSSP RPDHRTDRRT ASGAAADPAY VMWRHAAARR SAQIRRLLST SAPSAGAGAA
101: VRGPCIVHKR GTDILHDPWY NKDTAFPLTE RDRLGLRGLL PPRVMSFEQQ YERFINSYHS LEHNTQGEPD SVVSLAKWRI LNRLHDRNET LYYRVNSHCH
201: TSHWLACACL FSHRKEVFDV CVCVWCYGLF LLQVLIDNIK DFAPIIYTPT VGLVCENYSG LFRRPRGMYF SAKDKGEMMS MIYNWPAEKV DMIVVTDGSR
301: ILGLGDLGVQ GIGIPIGKLD VYVAAAGINP QKVLPIMLDV GTNNEKLLED KLYLGLRQPR LEGEEYLAVV DEFMEAVHAR WPKAIVQFED FQMKWAFETL
401: QRYRSRFCMF NDDVQGTAGV ALAGLLGAVR AQGRPLADFT KQKIVVVGAG SAGIGVLNMA KHAMLRMPGT HKIGELGEGH NQFWVLDKDG LITKSRKDLD
501: PAVARFARGY GPEEVEDLHE GASLVEVVKK VRPHVLLGLS GVGGIFNEEV LKAMKESDSP CPAIFAMSNP TTKAECTPED VFKHVGENAV FASGSPFSNV
601: TLSNGRKGYA NQANNMYLFP GIGLGALLSG ARHISDGMLH AAAECLASYI TDDAIRKGIL FPSISSIRHI TARVGAAVAR AAVDEDLAEG CSDMDPRDLR
701: SMSESDTVDY VARKMWYPVY SPLVNDK

Best Arabidopsis Sequence Match ( AT4G00570.1 )
(BLAST)

001: MMWKNIAGLS KAAAAARTHG SRRCFSTAIP GPCIVHKRGA DILHDPWFNK DTGFPLTERD RLGIRGLLPP RVMTCVQQCD RFIESFRSLE NNTKGEPENV
101: VALAKWRMLN RLHDRNETLY YRVLIDNIKD FAPIIYTPTV GLVCQNYSGL YRRPRGMYFS AKDKGEMMSM IYNWPAPQVD MIVITDGSRI LGLGDLGVQG
201: IGIPIGKLDM YVAAAGINPQ RVLPIMLDVG TNNEKLLQND LYLGVRQPRL EGEEYLEIID EFMEAAFTRW PKAVVQFEDF QAKWAFGTLE RYRKKFCMFN
301: DDVQGTAGVA LAGLLGTVRA QGRPISDFVN QKIVVVGAGS AGLGVTKMAV QAVARMAGIS ESEATKNFYL IDKDGLVTTE RTKLDPGAVL FAKNPAEIRE
401: GASIVEVVKK VRPHVLLGLS GVGGIFNEEV LKAMRESDSC KPAIFAMSNP TLNAECTAAD AFKHAGGNIV FASGSPFENV ELENGKVGHV NQANNMYLFP
501: GIGLGTLLSG ARIVTDGMLQ AASECLASYM TDEEVQKGIL YPSINNIRHI TAEVGAAVLR AAVTDDIAEG HGDVGPKDLS HMSKEDTVNY ITRNMWFPVY
601: SPLVHEK

Arabidopsis Description

NAD-ME2NAD-dependent malic enzyme 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8L7K9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.