Factsheet for HORVU3Hr1G019790.9

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G093390.2
HORVU3Hr1G027650.2
HORVU3Hr1G054240.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G11670.1	HORVU1Hr1G093390.2	AT2G42580.1	19000166
AT5G11670.1	HORVU3Hr1G027650.2	AT2G42580.1	19000166
AT5G11670.1	HORVU3Hr1G054240.2	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G110700.1	Wheat	plastid	84.36	95.79
TraesCS3B01G128000.1	Wheat	cytosol	77.23	95.26
TraesCS3A01G108900.1	Wheat	golgi	84.5	95.06
Os01t0188400-01	Rice	plastid	79.01	90.14
Zm00001d037961_P004	Maize	plastid	74.76	84.63
Zm00001d037962_P003	Maize	plastid	74.35	84.16
KXG21798	Sorghum	plastid	75.17	84.05
VIT_04s0008g00180.t01	Wine grape	cytosol	64.47	80.34
Zm00001d000316_P001	Maize	plastid	65.57	79.27
EES00150	Sorghum	plastid	69.0	79.09
HORVU5Hr1G053200.1	Barley	endoplasmic reticulum, extracellular	7.0	78.46
HORVU1Hr1G028030.16	Barley	mitochondrion	65.16	77.36
Solyc08g066360.2.1	Tomato	nucleus, plastid, unclear	62.0	76.48
CDX91199	Canola	cytosol	60.77	75.34
CDY61446	Canola	cytosol	60.63	75.17
CDX88203	Canola	cytosol	60.63	75.17
Bra023336.1-P	Field mustard	cytosol	60.63	75.17
Bra009866.1-P	Field mustard	cytosol	60.63	75.17
CDX80544	Canola	cytosol	60.49	75.0
Bra006107.1-P	Field mustard	cytosol	60.36	74.83
CDX78432	Canola	cytosol	60.08	74.49
CDX70409	Canola	cytosol	60.08	74.49
KRH52781	Soybean	mitochondrion	62.96	74.15
AT5G11670.1	Thale cress	cytosol	59.81	74.15
AT5G25880.1	Thale cress	cytosol	59.53	73.81
KRH62099	Soybean	mitochondrion	62.96	73.79
VIT_02s0012g02460.t01	Wine grape	endoplasmic reticulum, plasma membrane	43.07	72.69
HORVU3Hr1G070850.1	Barley	mitochondrion	59.4	69.5
HORVU3Hr1G068600.2	Barley	mitochondrion, plastid	66.12	68.18
OQU86165	Sorghum	mitochondrion	65.02	67.04
CDY02046	Canola	mitochondrion	48.56	63.33
PGSC0003DMT400008389	Potato	mitochondrion	19.07	52.45
HORVU3Hr1G068570.1	Barley	cytosol	3.29	50.0
HORVU5Hr1G018620.1	Barley	cytosol	7.41	46.55
HORVU2Hr1G050980.2	Barley	mitochondrion, plastid	33.47	37.14
HORVU1Hr1G045720.1	Barley	plastid	33.06	33.15
HORVU3Hr1G102340.13	Barley	plastid	8.5	25.83

Protein Annotations

Gene3D:3.40.50.10380	Gene3D:3.40.50.720	MapMan:5.1.1.4	UniProt:A0A287KCB3	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004470	GO:GO:0004471	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0046872	GO:GO:0051287	GO:GO:0055114	EnsemblPlantsGene:HORVU3Hr1G019790	EnsemblPlants:HORVU3Hr1G019790.9
InterPro:IPR037062	InterPro:Malic_NAD-bd	InterPro:Malic_N_dom	InterPro:Malic_N_dom_sf	InterPro:Malic_OxRdtase	InterPro:Malic_enzyme_CS
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00390	PFAM:PF03949	PIRSF:PIRSF000106	PRINTS:PR00072	ScanProsite:PS00331
PANTHER:PTHR23406	PANTHER:PTHR23406:SF29	SMART:SM00919	SMART:SM01274	SUPFAM:SSF51735	SUPFAM:SSF53223
UniParc:UPI000B474772	SEG:seg	:	:	:	:

Description

Malic enzyme [Source:UniProtKB/TrEMBL;Acc:A0A287KCB3]

Coordinates

chrchr3H:+:57786375..57791406

Molecular Weight (calculated)

79581.6 Da

IEP (calculated)

7.970

GRAVY (calculated)

-0.174

Length

729 amino acids

Sequence
(BLAST)

001: SSTSLPHLPQ PPRSLARRGR RQPTRGRRQP TRLHPPTHPD RALELPAEPA AMLSARTASP AASLVPTPRP SPRSLALASS RAIAPRLRCS GCCMLCGEVS
101: FVCLLFCLTL QWKRGGGAGA RGDGCTSCLE VRRRAAAVAV RAAQPKRVEA VAMESAAETA EVAAEKEVAA AGGGVEDKYG EDRATEELPV TPWAFSVASG
201: YTLLRDPHHN KGLAFTERER DAHYLRGLLP PGVVSQDLQV KKIMHNLRQY KVPLQRYVAM MDLQERNERL FYKLLIDNVE ELLPVVYTPT VGEACQKYGS
301: IFRRPQGLYV SLRDKGKVLD VLRNWPERNI QVIVVTDGER ILGLGDLGCQ GMGIPVGKLS LYTALGGVRP SACLPITIDV GTNNEQLLND EFYIGLRQRR
401: ATGEEYHELM EEFMDAVKQI YGEKVLIQFE DFANHNAFDL LAKYSKSHLV FNDDIQGTAS VVLAGLLSSL KVVGGTLAEH TYLFLGAGEA GTGIAELIAL
501: EISKQTNAPI EECRKKVWLV DSKGLIVNSR KDSLQPFKKS WAHEHEPVTT LLDAIESIKP TVLIGTSGVG RAFTKEVVEA MASFNERPVI FSLSNPTSHS
601: ECTAEEAYNW TQGRAVFASG SPFDPVEHNG KIHVPGQANN AYIFPGFGLG VVISGAIRVH EDMLLAASET LAAQATQENF DKGSIFPPFT NIRKISALIA
701: ASVAAKAYEL GLATRLPRPR DLEKYAESC

Best Arabidopsis Sequence Match ( AT1G79750.1 )
(BLAST)

001: MISLTPSLFL NKTVVPGCST RLSLRQPRTI ITPPASLRVF SSLGSNQDPT GSVLIETTAT SSSSLETSAA DIVPKSTVSG GVQDVYGEDA ATEDMPITPW
101: SLSVASGYTL LRDPHHNKGL AFSHRERDAH YLRGLLPPTV ISQDLQVKKI MHTLRQYQVP LQKYMAMMDL QETNERLFYK LLIDHVEELL PVIYTPTVGE
201: ACQKYGSIFL RPQGLFISLK EKGKIHEVLR NWPEKNIQVI VVTDGERILG LGDLGCQGMG IPVGKLSLYT ALGGVRPSAC LPVTIDVGTN NEKLLNDEFY
301: IGLRQRRATG EEYSELMHEF MTAVKQNYGE KVVIQFEDFA NHNAFDLLAK YGTTHLVFND DIQGTASVVL AGLIAALRFV GGSLSDHRFL FLGAGEAGTG
401: IAELIALEIS KKSHIPLEEA RKNIWLVDSK GLIVSSRKES IQHFKKPWAH DHEPIRELVD AVKAIKPTVL IGTSGVGQTF TQDVVETMAK LNEKPIILSL
501: SNPTSQSECT AEEAYTWSQG RAIFASGSPF APVEYEGKTF VPGQANNAYI FPGFGLGLIM SGTIRVHDDM LLAASEALAE ELMEEHYEKG MIYPPFRNIR
601: KISARIAAKV AAKAYELGLA TRLPQPKELE QCAESSMYSP SYRSYR

Arabidopsis Description

NADP-ME4Malic enzyme [Source:UniProtKB/TrEMBL;Acc:A0A178W4H6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.