Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88203 | Canola | cytosol | 94.56 | 94.56 |
| Bra009866.1-P | Field mustard | cytosol | 94.56 | 94.56 |
| CDX80544 | Canola | cytosol | 94.05 | 94.05 |
| AT5G11670.1 | Thale cress | cytosol | 90.99 | 90.99 |
| Os05t0186300-01 | Rice | cytosol, plasma membrane | 78.91 | 81.4 |
| VIT_04s0008g00180.t01 | Wine grape | cytosol | 80.78 | 81.2 |
| Zm00001d037693_P003 | Maize | extracellular | 77.04 | 79.47 |
| EES19164 | Sorghum | cytosol, peroxisome, plastid | 76.7 | 79.12 |
| Solyc08g066360.2.1 | Tomato | nucleus, plastid, unclear | 79.25 | 78.85 |
| PGSC0003DMT400077452 | Potato | cytosol | 79.08 | 78.68 |
| TraesCS1A01G122500.1 | Wheat | cytosol | 76.02 | 78.42 |
| TraesCS1B01G141700.1 | Wheat | cytosol | 75.85 | 78.25 |
| Zm00001d010358_P001 | Maize | cytosol | 75.68 | 78.07 |
| KRH62099 | Soybean | mitochondrion | 80.27 | 75.88 |
| KRH52781 | Soybean | mitochondrion | 79.59 | 75.61 |
| AT2G19900.1 | Thale cress | cytosol | 74.66 | 75.56 |
| TraesCS1D01G123400.2 | Wheat | mitochondrion | 72.79 | 74.69 |
| TraesCS3B01G128000.1 | Wheat | cytosol | 74.83 | 74.45 |
| CDY02046 | Canola | mitochondrion | 70.75 | 74.42 |
| HORVU1Hr1G028030.16 | Barley | mitochondrion | 74.15 | 71.01 |
| VIT_02s0012g02460.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 51.19 | 69.68 |
| AT1G79750.1 | Thale cress | plastid | 75.51 | 68.73 |
| Zm00001d037961_P004 | Maize | plastid | 75.17 | 68.63 |
| Zm00001d037962_P003 | Maize | plastid | 75.0 | 68.48 |
| Os01t0188400-01 | Rice | plastid | 74.32 | 68.39 |
| TraesCS3D01G110700.1 | Wheat | plastid | 74.49 | 68.22 |
| KXG21798 | Sorghum | plastid | 75.51 | 68.1 |
| Zm00001d036873_P001 | Maize | cytosol | 5.78 | 68.0 |
| TraesCS3A01G108900.1 | Wheat | golgi | 74.66 | 67.75 |
| EES00150 | Sorghum | plastid | 71.77 | 66.35 |
| Os02t0665000-01 | Rice | cytosol | 20.92 | 66.13 |
| Zm00001d000316_P001 | Maize | plastid | 67.69 | 66.0 |
| Zm00001d034292_P001 | Maize | cytosol | 28.06 | 60.22 |
| HORVU3Hr1G019790.9 | Barley | plastid | 73.81 | 59.53 |
| OQU86165 | Sorghum | mitochondrion | 65.31 | 54.31 |
| HORVU5Hr1G018620.1 | Barley | cytosol | 9.18 | 46.55 |
| AT4G00570.1 | Thale cress | mitochondrion | 39.8 | 38.55 |
| AT2G13560.1 | Thale cress | mitochondrion | 40.31 | 38.04 |
| HORVU3Hr1G102340.13 | Barley | plastid | 11.05 | 27.08 |
| Zm00001d003090_P001 | Maize | mitochondrion | 14.46 | 24.93 |
| Zm00001d051182_P001 | Maize | cytosol | 6.63 | 17.65 |
Protein Annotations
| Gene3D:3.40.50.10380 | Gene3D:3.40.50.720 | MapMan:5.1.1.4 | EntrezGene:832657 | UniProt:A0A178UAR6 | ProteinID:AAD40139.1 |
| ProteinID:AED93497.1 | ArrayExpress:AT5G25880 | EnsemblPlantsGene:AT5G25880 | RefSeq:AT5G25880 | TAIR:AT5G25880 | RefSeq:AT5G25880-TAIR-G |
| EnsemblPlants:AT5G25880.1 | TAIR:AT5G25880.1 | Symbol:ATNADP-ME3 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004470 | GO:GO:0004471 | GO:GO:0004473 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006090 | GO:GO:0006108 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008948 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0016491 | GO:GO:0046872 | GO:GO:0051260 | GO:GO:0051287 | GO:GO:0055114 | InterPro:IPR037062 |
| InterPro:Malic_NAD-bd | InterPro:Malic_N_dom | InterPro:Malic_N_dom_sf | InterPro:Malic_OxRdtase | InterPro:Malic_enzyme_CS | InterPro:NAD(P)-bd_dom_sf |
| RefSeq:NP_197960.1 | ProteinID:OAO90760.1 | PFAM:PF00390 | PFAM:PF03949 | PIRSF:PIRSF000106 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0001185 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009009 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00072 | ScanProsite:PS00331 | PANTHER:PTHR23406 | PANTHER:PTHR23406:SF39 |
| UniProt:Q9XGZ0 | SMART:SM00919 | SMART:SM01274 | SUPFAM:SSF51735 | SUPFAM:SSF53223 | UniParc:UPI000009E75D |
Description
NADP-ME3Malic enzyme [Source:UniProtKB/TrEMBL;Acc:A0A178UAR6]
Coordinates
chr5:+:9024334..9028395
Molecular Weight (calculated)
64613.9 Da
IEP (calculated)
6.986
GRAVY (calculated)
-0.134
Length
588 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTNQTQISD EYVTGNSSGV GGGISDVYGE DSATLDQLVT PWVTSVASGY TLMRDPRYNK GLAFTDKERD AHYITGLLPP VVLSQDVQER KVMHNLRQYT
101: VPLQRYMALM DLQERNERLF YKLLIDNVEE LLPVVYTPTV GEACQKYGSI YRRPQGLYIS LKEKGKILEV LKNWPQRGIQ VIVVTDGERI LGLGDLGCQG
201: MGIPVGKLSL YTALGGIRPS ACLPITIDVG TNNEKLLNNE FYIGLKQKRA NGEEYAEFLQ EFMCAVKQNY GEKVLVQFED FANHHAFELL SKYCSSHLVF
301: NDDIQGTASV VLAGLIAAQK VLGKSLADHT FLFLGAGEAG TGIAELIALK ISKETGKPID ETRKKIWLVD SKGLIVSERK ESLQHFKQPW AHDHKPVKEL
401: LAAVNAIKPT VLIGTSGVGK TFTKEVVEAM ATLNEKPLIL ALSNPTSQAE CTAEEAYTWT KGRAIFASGS PFDPVQYDGK KFTPGQANNC YIFPGLGLGL
501: IMSGAIRVRD DMLLAASEAL ASQVTEENFA NGLIYPPFAN IRKISANIAA SVGAKTYELG LASNLPRPKD LVKMAESCMY SPVYRNFR
101: VPLQRYMALM DLQERNERLF YKLLIDNVEE LLPVVYTPTV GEACQKYGSI YRRPQGLYIS LKEKGKILEV LKNWPQRGIQ VIVVTDGERI LGLGDLGCQG
201: MGIPVGKLSL YTALGGIRPS ACLPITIDVG TNNEKLLNNE FYIGLKQKRA NGEEYAEFLQ EFMCAVKQNY GEKVLVQFED FANHHAFELL SKYCSSHLVF
301: NDDIQGTASV VLAGLIAAQK VLGKSLADHT FLFLGAGEAG TGIAELIALK ISKETGKPID ETRKKIWLVD SKGLIVSERK ESLQHFKQPW AHDHKPVKEL
401: LAAVNAIKPT VLIGTSGVGK TFTKEVVEAM ATLNEKPLIL ALSNPTSQAE CTAEEAYTWT KGRAIFASGS PFDPVQYDGK KFTPGQANNC YIFPGLGLGL
501: IMSGAIRVRD DMLLAASEAL ASQVTEENFA NGLIYPPFAN IRKISANIAA SVGAKTYELG LASNLPRPKD LVKMAESCMY SPVYRNFR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.