Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0665000-01 | Rice | cytosol | 34.67 | 51.08 |
| VIT_02s0012g02460.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 51.09 | 32.41 |
| Zm00001d012764_P001 | Maize | cytosol | 58.76 | 32.39 |
| Zm00001d037693_P003 | Maize | extracellular | 61.31 | 29.47 |
| Zm00001d010358_P001 | Maize | cytosol | 61.31 | 29.47 |
| CDX91199 | Canola | cytosol | 61.68 | 28.74 |
| AT5G11670.1 | Thale cress | cytosol | 61.31 | 28.57 |
| Bra023336.1-P | Field mustard | cytosol | 61.31 | 28.57 |
| CDY61446 | Canola | cytosol | 61.31 | 28.57 |
| VIT_04s0008g00180.t01 | Wine grape | cytosol | 60.95 | 28.55 |
| Bra009866.1-P | Field mustard | cytosol | 60.95 | 28.4 |
| CDX80544 | Canola | cytosol | 60.95 | 28.4 |
| CDX88203 | Canola | cytosol | 60.95 | 28.4 |
| AT5G25880.1 | Thale cress | cytosol | 60.22 | 28.06 |
| CDX78432 | Canola | cytosol | 60.22 | 28.06 |
| Bra006107.1-P | Field mustard | cytosol | 59.85 | 27.89 |
| CDX70409 | Canola | cytosol | 59.85 | 27.89 |
| Solyc08g066360.2.1 | Tomato | nucleus, plastid, unclear | 59.49 | 27.58 |
| KRH52781 | Soybean | mitochondrion | 60.95 | 26.98 |
| KRH62099 | Soybean | mitochondrion | 60.95 | 26.85 |
| Zm00001d043601_P003 | Maize | mitochondrion | 64.96 | 26.81 |
| HORVU5Hr1G018620.1 | Barley | cytosol | 11.31 | 26.72 |
| CDY02046 | Canola | mitochondrion | 51.46 | 25.22 |
| Zm00001d000316_P001 | Maize | plastid | 54.38 | 24.71 |
| Zm00001d037961_P004 | Maize | plastid | 57.66 | 24.53 |
| Zm00001d037962_P003 | Maize | plastid | 57.66 | 24.53 |
| Zm00001d036873_P001 | Maize | cytosol | 3.28 | 18.0 |
| HORVU3Hr1G102340.13 | Barley | plastid | 15.33 | 17.5 |
| Zm00001d013911_P001 | Maize | mitochondrion | 35.04 | 15.0 |
| Zm00001d021546_P003 | Maize | mitochondrion | 32.85 | 14.54 |
| Zm00001d003090_P001 | Maize | mitochondrion | 12.41 | 9.97 |
| Zm00001d051182_P001 | Maize | cytosol | 6.93 | 8.6 |
| Zm00001d042392_P001 | Maize | plastid | 4.74 | 5.04 |
Protein Annotations
| Gene3D:3.40.50.10380 | MapMan:50.1.1 | UniProt:A0A1D6L6K7 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004470 |
| GO:GO:0004471 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0055114 | InterPro:IPR037062 | InterPro:Malic_N_dom |
| InterPro:Malic_N_dom_sf | InterPro:Malic_OxRdtase | ProteinID:ONM09931.1 | PFAM:PF00390 | PIRSF:PIRSF000106 | PRINTS:PR00072 |
| PANTHER:PTHR23406 | PANTHER:PTHR23406:SF37 | SMART:SM01274 | SUPFAM:SSF53223 | UniParc:UPI00084391E7 | EnsemblPlantsGene:Zm00001d034292 |
| EnsemblPlants:Zm00001d034292_P001 | EnsemblPlants:Zm00001d034292_T001 | SEG:seg | : | : | : |
Description
NADP-dependent malic enzyme 1
Coordinates
chr1:-:288572505..288573329
Molecular Weight (calculated)
31070.8 Da
IEP (calculated)
8.362
GRAVY (calculated)
-0.153
Length
274 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLQERNEWL FYKLLIDNVE ELLPIMYTPT VGEAYQKYGS IFSKPQGLYI SLKEKGKILE VLKNRPERSI QVIVVTDGER ILGLGDPRCQ GMGIPVGKLS
101: IYTALGEVRP SACLPITLDV GTNNEELIND KLYIGLRQRR ATGQEFTNFL QEFMTAVKHN AGYKHKEQQT QGVIDQIIKE HLGQVAAFQA GAQFNQHLLL
201: AFLGAVGCGP PSLSNSASSW HVFQCCLHIH LYQHCLHIEI YWPNQSSKYL QKHKVSSSRI LDNLRRLHLV VIML
101: IYTALGEVRP SACLPITLDV GTNNEELIND KLYIGLRQRR ATGQEFTNFL QEFMTAVKHN AGYKHKEQQT QGVIDQIIKE HLGQVAAFQA GAQFNQHLLL
201: AFLGAVGCGP PSLSNSASSW HVFQCCLHIH LYQHCLHIEI YWPNQSSKYL QKHKVSSSRI LDNLRRLHLV VIML
001: MALTELQERN ERLFYKLLID NVEELLPIVY TPTVGEACQK FGSIFRRPQG LFISLKDKGK ILDVLKNWPE RNIQVIVVTD GERILGLGDL GCQGMGIPVG
101: KLALYSALGG VRPSACLPVT IDVGTNNEKL LNDEFYIGLR QKRATGQEYS ELLNEFMSAV KQNYGEKVLI QFEDFANHNA FELLAKYSDT HLVFNDDIQG
201: TASVVLAGLV SAQKLTNSPL AEHTFLFLGA GEAGTGIAEL IALYMSKQMN ASVEESRKKI WLVDSKGLIV NSRKDSLQDF KKPWAHEHEP VKDLLGAIKA
301: IKPTVLIGSS GVGRSFTKEV IEAMSSINER PLIMALSNPT TQSECTAEEA YTWSKGRAIF ASGSPFDPVE YEGKVFVSTQ ANNAYIFPGF GLGLVISGAI
401: RVHDDMLLAA AEALAGQVSK ENYEKGMIYP SFSSIRKISA QIAANVATKA YELGLAGRLP RPKDIVKCAE SSMYSPTYRL YR
101: KLALYSALGG VRPSACLPVT IDVGTNNEKL LNDEFYIGLR QKRATGQEYS ELLNEFMSAV KQNYGEKVLI QFEDFANHNA FELLAKYSDT HLVFNDDIQG
201: TASVVLAGLV SAQKLTNSPL AEHTFLFLGA GEAGTGIAEL IALYMSKQMN ASVEESRKKI WLVDSKGLIV NSRKDSLQDF KKPWAHEHEP VKDLLGAIKA
301: IKPTVLIGSS GVGRSFTKEV IEAMSSINER PLIMALSNPT TQSECTAEEA YTWSKGRAIF ASGSPFDPVE YEGKVFVSTQ ANNAYIFPGF GLGLVISGAI
401: RVHDDMLLAA AEALAGQVSK ENYEKGMIYP SFSSIRKISA QIAANVATKA YELGLAGRLP RPKDIVKCAE SSMYSPTYRL YR
Arabidopsis Description
NADP-ME1NADP-dependent malic enzyme 1 [Source:UniProtKB/Swiss-Prot;Acc:O82191]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.