Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES01073 | Sorghum | cytosol | 93.69 | 93.69 |
| Zm00001d044479_P001 | Maize | cytosol | 92.36 | 92.36 |
| TraesCS3B01G251600.1 | Wheat | cytosol, mitochondrion | 81.06 | 80.23 |
| TraesCS3D01G231300.1 | Wheat | cytosol, mitochondrion | 80.76 | 79.94 |
| TraesCS3A01G221800.1 | Wheat | cytosol | 80.76 | 79.94 |
| HORVU3Hr1G054240.2 | Barley | cytosol, mitochondrion | 79.74 | 78.92 |
| GSMUA_Achr7P24480_001 | Banana | cytosol | 56.53 | 59.32 |
| GSMUA_Achr4P08560_001 | Banana | cytosol | 58.88 | 58.54 |
| VIT_18s0001g09830.t01 | Wine grape | cytosol | 21.73 | 56.06 |
| Zm00001d039362_P002 | Maize | cytosol | 53.89 | 54.78 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 40.38 | 54.67 |
| Zm00001d008930_P003 | Maize | cytosol | 54.19 | 54.67 |
| VIT_19s0014g01470.t01 | Wine grape | cytosol | 53.3 | 52.38 |
| KRH26223 | Soybean | nucleus | 51.4 | 51.78 |
| KRH55099 | Soybean | nucleus | 51.54 | 51.77 |
| GSMUA_Achr3P25160_001 | Banana | cytosol | 54.04 | 51.69 |
| KRH21985 | Soybean | cytosol | 52.42 | 51.59 |
| KRH27330 | Soybean | cytosol | 51.84 | 50.57 |
| CDY25865 | Canola | cytosol | 48.46 | 50.15 |
| Bra038116.1-P | Field mustard | cytosol | 48.46 | 50.15 |
| PGSC0003DMT400032362 | Potato | cytosol | 51.54 | 50.14 |
| Zm00001d004494_P001 | Maize | cytosol, mitochondrion | 16.3 | 50.0 |
| CDY25722 | Canola | cytosol, plastid | 48.75 | 49.78 |
| VIT_12s0028g02240.t01 | Wine grape | cytosol | 51.84 | 49.72 |
| Solyc07g062580.2.1 | Tomato | cytosol | 51.1 | 49.64 |
| Bra030946.1-P | Field mustard | cytosol, plastid | 48.75 | 49.55 |
| CDY02514 | Canola | cytosol, plastid | 48.75 | 49.55 |
| CDY45930 | Canola | cytosol | 47.87 | 49.47 |
| KRH22291 | Soybean | plastid | 42.14 | 49.14 |
| PGSC0003DMT400054803 | Potato | cytosol | 21.15 | 48.98 |
| GSMUA_AchrUn_... | Banana | cytosol | 18.94 | 48.13 |
| Bra000267.1-P | Field mustard | cytosol | 46.11 | 46.73 |
| CDY61202 | Canola | cytosol | 45.96 | 46.65 |
| AT1G53300.1 | Thale cress | cytosol | 47.72 | 46.49 |
| Bra007405.1-P | Field mustard | cytosol | 45.81 | 46.36 |
| CDY51514 | Canola | cytosol | 45.52 | 46.34 |
| AT3G58620.1 | Thale cress | cytosol | 46.4 | 46.33 |
| CDY55390 | Canola | cytosol | 45.37 | 46.19 |
| CDY49237 | Canola | cytosol | 45.08 | 46.03 |
| CDX71941 | Canola | cytosol | 45.37 | 45.85 |
| Bra004709.1-P | Field mustard | cytosol | 44.05 | 45.66 |
| CDY42827 | Canola | cytosol | 44.49 | 45.16 |
| AT2G42580.1 | Thale cress | cytosol | 45.67 | 45.01 |
| PGSC0003DMT400054902 | Potato | cytosol | 19.53 | 44.48 |
| CDY34224 | Canola | cytosol | 4.41 | 43.48 |
| Zm00001d009724_P009 | Maize | cytosol | 68.14 | 43.41 |
| KRH27037 | Soybean | nucleus | 41.85 | 42.22 |
| Solyc10g007240.1.1 | Tomato | cytosol | 36.42 | 41.75 |
| PGSC0003DMT400054904 | Potato | cytosol | 36.86 | 41.56 |
| PGSC0003DMT400054911 | Potato | cytosol | 31.72 | 41.46 |
| Bra023795.1-P | Field mustard | cytosol | 5.29 | 40.91 |
| Solyc10g007230.1.1 | Tomato | cytosol | 35.1 | 40.1 |
| PGSC0003DMT400054796 | Potato | cytosol, plastid | 35.83 | 39.67 |
| AT3G14950.1 | Thale cress | cytosol | 42.14 | 39.32 |
| Solyc10g007420.2.1 | Tomato | cytosol | 24.52 | 39.29 |
| Solyc10g007220.1.1 | Tomato | cytosol | 29.07 | 39.21 |
| Bra027292.1-P | Field mustard | cytosol | 41.41 | 38.42 |
| CDX97619 | Canola | cytosol | 40.68 | 38.21 |
| CDX98517 | Canola | cytosol | 40.53 | 38.12 |
| PGSC0003DMT400054909 | Potato | cytosol | 22.61 | 37.38 |
| CDY32327 | Canola | cytosol | 39.65 | 37.04 |
| CDY20095 | Canola | nucleus | 39.5 | 36.95 |
| Solyc10g007430.1.1 | Tomato | cytosol, plastid | 20.41 | 36.77 |
| Solyc10g007250.1.1 | Tomato | cytosol | 14.98 | 36.56 |
| Bra021583.1-P | Field mustard | nucleus | 40.23 | 36.24 |
| CDY34222 | Canola | cytosol | 16.3 | 36.04 |
| PGSC0003DMT400091014 | Potato | nucleus | 32.01 | 35.91 |
| CDY40820 | Canola | mitochondrion | 14.68 | 35.59 |
| Bra023793.1-P | Field mustard | cytosol | 19.97 | 33.01 |
| Zm00001d052221_P002 | Maize | cytosol, nucleus, plastid | 27.46 | 31.97 |
| Zm00001d018088_P001 | Maize | cytosol | 27.46 | 31.69 |
| CDY34223 | Canola | cytosol | 15.12 | 31.6 |
| Bra023794.1-P | Field mustard | cytosol, nucleus, plastid | 14.83 | 30.98 |
| Zm00001d034423_P001 | Maize | cytosol | 8.96 | 24.6 |
| Zm00001d012121_P002 | Maize | cytosol | 8.96 | 23.92 |
| Zm00001d006366_P001 | Maize | cytosol | 0.44 | 1.29 |
| Zm00001d017669_P001 | Maize | cytosol | 0.44 | 1.29 |
| Zm00001d033961_P001 | Maize | cytosol | 0.44 | 1.29 |
| Zm00001d035258_P001 | Maize | cytosol | 0.44 | 1.29 |
| Zm00001d035261_P001 | Maize | cytosol | 0.44 | 1.29 |
| Zm00001d002746_P001 | Maize | cytosol | 0.44 | 1.29 |
| Zm00001d039774_P001 | Maize | cytosol | 0.44 | 1.29 |
| Zm00001d052005_P001 | Maize | cytosol | 0.44 | 1.29 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:11.3.2.5 | Gene3D:3.40.30.10 | ProteinID:AQK96625.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019725 |
| GO:GO:0045454 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR013766 | InterPro:IPR019734 | UniProt:K7VZE6 |
| PFAM:PF00085 | PFAM:PF00515 | PFAM:PF13414 | PFscan:PS50005 | PFscan:PS50293 | PANTHER:PTHR22904 |
| PANTHER:PTHR22904:SF395 | SMART:SM00028 | SUPFAM:SSF48452 | SUPFAM:SSF52833 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf |
| InterPro:TPR_1 | InterPro:TPR_repeat | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | UniParc:UPI000221F133 | EnsemblPlantsGene:Zm00001d011352 |
| EnsemblPlants:Zm00001d011352_P001 | EnsemblPlants:Zm00001d011352_T001 | SEG:seg | : | : | : |
Description
Electron transporter
Coordinates
chr8:+:147819974..147824314
Molecular Weight (calculated)
72953.9 Da
IEP (calculated)
8.943
GRAVY (calculated)
-0.251
Length
681 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEADRIRHC TAALALHDDE VRDKPDAKAN VFADLGSPVS PLRVRASVAT SSSSSSGSAK SPAPSNAGMA GGRSHSGELV GECNPPRLMA HRRSGSGQLI
101: FTGGGSRGRG GGSGDRGSTA SSPMLNALPT GNIFPPVRVP ATAAAPPPSR SRPDVLGSGT GHYGHGSIMR GTGMAPARSS IDSSFLGHSS RSPASFSASS
201: GSLQEVTRLG NEWYKKGKYG EALRHYERAV ALCPESAACR GNRAAALIGL GRLADALHEC EEAVRLDPVS GRAHSRVAGV CLRLGMIDKA RRHFTQAGHL
301: QHSDPAEWHK LQEVEVHLGR CTDARKIGDW KSALREADAA IAAGADSSQL LLALRSEALL RLHKLEEAES TLASLLKLDS ALPSSLTAAK LSGMLAESYI
401: HIVQAQVDMA FGRFDTAVAA AEKARDLDPG NAEIGMVLNN VRLVAKAREQ GNDLFKAAKF LDASIAYGEG LKYDPLNSVL HCNRAACWSK LEKWGKAVDD
501: CNEALRIQPN YTKALLRRAA SYAKLERWVD CVRDYEVLRK EFPSDKEVAE ALFHAQIALK ATRGEDVSNM KFGGEVEMVS NVEQLNAAIS SPGVTVVYFM
601: STMNQQCTQI TPSINILCTE CPSVNFLKVN VNSSPMVART ENVRIVPTFK IYKGGVKVKE MICPSLHVLR YSVRHYSVSS S
101: FTGGGSRGRG GGSGDRGSTA SSPMLNALPT GNIFPPVRVP ATAAAPPPSR SRPDVLGSGT GHYGHGSIMR GTGMAPARSS IDSSFLGHSS RSPASFSASS
201: GSLQEVTRLG NEWYKKGKYG EALRHYERAV ALCPESAACR GNRAAALIGL GRLADALHEC EEAVRLDPVS GRAHSRVAGV CLRLGMIDKA RRHFTQAGHL
301: QHSDPAEWHK LQEVEVHLGR CTDARKIGDW KSALREADAA IAAGADSSQL LLALRSEALL RLHKLEEAES TLASLLKLDS ALPSSLTAAK LSGMLAESYI
401: HIVQAQVDMA FGRFDTAVAA AEKARDLDPG NAEIGMVLNN VRLVAKAREQ GNDLFKAAKF LDASIAYGEG LKYDPLNSVL HCNRAACWSK LEKWGKAVDD
501: CNEALRIQPN YTKALLRRAA SYAKLERWVD CVRDYEVLRK EFPSDKEVAE ALFHAQIALK ATRGEDVSNM KFGGEVEMVS NVEQLNAAIS SPGVTVVYFM
601: STMNQQCTQI TPSINILCTE CPSVNFLKVN VNSSPMVART ENVRIVPTFK IYKGGVKVKE MICPSLHVLR YSVRHYSVSS S
001: MPKSVKPISE SDKLSDHLRD SSLTSEINKP DFRELDLGSP VSPLRSQPRG LTTTTTTTTT SSSSSSSSGS VTGRIKHAPV IGRSNSVRSQ SNSSSGNNNL
101: RPRSDSATTS SSSHSQPLLS SSSSSATSPA PTSPANVLPT GNICPSGKIQ ITGMTQSRSR SDVLGSGTGT YGHGSIMRGG GISPAKPTNT GGGSNSPVNV
201: GSSSRSSSTV ATGETPIWKK AILGSDSEEV KRVGNEMYRK GLFNEALKLY DRAIALSPTN AAYRSNRAAA LIGLSRIGEA VKECEDAVRS DPNYGRAHHR
301: LALLLIRLGQ VNSARKHLCF LGRPSDPMEL QKLEAVEKHL IKCVDARRVT DWKTVLIEAD AAIVSGADFS PQLFMCKVEA FLKLHRLDDA QSKLLEVPKV
401: EPFPVSCSQT RFSGMACEAY IYFVKAQIEM ALGRFENAVM AAEKASQIDP RCNEVAMLHN TVTLVARARA RGNDLYKSER YTEASSAYAE GLRLDPCNAI
501: LYCNRAACWF KLGMWERSIE DCNQALRYQP SYTKPLLRRA ASNSKMERWG AAVSDYEALI RELPHDKEVA ESLFHAQVAL KKSRGEEVLN MEFGGEVEEI
601: YSLEQFKSAM NLPGVSVIHF STASDHQCKQ ISPFVDSLCT RYPSIHFLKV DIDKCPSIGN AENVRVVPTV KIYKNGSRVK EIVCPSKEVL EYSVRHYSG
101: RPRSDSATTS SSSHSQPLLS SSSSSATSPA PTSPANVLPT GNICPSGKIQ ITGMTQSRSR SDVLGSGTGT YGHGSIMRGG GISPAKPTNT GGGSNSPVNV
201: GSSSRSSSTV ATGETPIWKK AILGSDSEEV KRVGNEMYRK GLFNEALKLY DRAIALSPTN AAYRSNRAAA LIGLSRIGEA VKECEDAVRS DPNYGRAHHR
301: LALLLIRLGQ VNSARKHLCF LGRPSDPMEL QKLEAVEKHL IKCVDARRVT DWKTVLIEAD AAIVSGADFS PQLFMCKVEA FLKLHRLDDA QSKLLEVPKV
401: EPFPVSCSQT RFSGMACEAY IYFVKAQIEM ALGRFENAVM AAEKASQIDP RCNEVAMLHN TVTLVARARA RGNDLYKSER YTEASSAYAE GLRLDPCNAI
501: LYCNRAACWF KLGMWERSIE DCNQALRYQP SYTKPLLRRA ASNSKMERWG AAVSDYEALI RELPHDKEVA ESLFHAQVAL KKSRGEEVLN MEFGGEVEEI
601: YSLEQFKSAM NLPGVSVIHF STASDHQCKQ ISPFVDSLCT RYPSIHFLKV DIDKCPSIGN AENVRVVPTV KIYKNGSRVK EIVCPSKEVL EYSVRHYSG
Arabidopsis Description
TTL1TPR repeat-containing thioredoxin TTL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAH1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.