Factsheet for Zm00001d053133_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

plastid 1
plasma membrane 1
mitochondrion 1
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, mitochondrion, plasma membrane, plastid
iPSORT:	plastid
MultiLoc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d004494_P001
Zm00001d006366_P001
Zm00001d008930_P003
Zm00001d009724_P009
Zm00001d011352_P001
Zm00001d033961_P001
Zm00001d039362_P002
Zm00001d044479_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G42440.1	Zm00001d004494_P001	AT2G42580.1	19000166
AT5G42440.1	Zm00001d006366_P001	AT2G42580.1	19000166
AT5G42440.1	Zm00001d008930_P003	AT2G42580.1	19000166
AT5G42440.1	Zm00001d009724_P009	AT2G42580.1	19000166
AT5G42440.1	Zm00001d011352_P001	AT2G42580.1	19000166
AT5G42440.1	Zm00001d033961_P001	AT2G42580.1	19000166
AT5G42440.1	Zm00001d039362_P002	AT2G42580.1	19000166
AT5G42440.1	Zm00001d044479_P001	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG27836	Sorghum	plastid	74.82	70.59
HORVU4Hr1G020000.1	Barley	plasma membrane	58.27	65.15
TraesCS4B01G111300.1	Wheat	plasma membrane	57.55	64.0
TraesCS4A01G207800.1	Wheat	plasma membrane	57.55	64.0
TraesCS4D01G109000.1	Wheat	plasma membrane	57.07	63.47
Os11t0168600-01	Rice	cytosol, plasma membrane	13.43	56.57
GSMUA_Achr10P...	Banana	plasma membrane	39.81	46.76
CDY14753	Canola	plasma membrane	38.13	43.68
CDY68216	Canola	plasma membrane	37.89	43.41
Bra016962.1-P	Field mustard	plasma membrane	37.65	43.13
AT5G42440.1	Thale cress	golgi, plasma membrane	35.73	41.5
VIT_18s0072g00170.t01	Wine grape	plasma membrane	35.97	41.21
KRG91688	Soybean	plasma membrane	36.45	40.97
KRH35107	Soybean	plasma membrane	35.97	40.76
Solyc04g071870.1.1	Tomato	plasma membrane	35.49	38.85
PGSC0003DMT400064560	Potato	plasma membrane	35.25	38.58
KRG94081	Soybean	plasma membrane	21.82	37.76
KRG94367	Soybean	plasma membrane	20.14	28.77

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.10.2	Gene3D:3.30.200.20	UniProt:A0A1D6QMB8	ProteinID:AQK58810.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF176	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI00084425B2	EnsemblPlantsGene:Zm00001d053133	EnsemblPlants:Zm00001d053133_P001	EnsemblPlants:Zm00001d053133_T001
SEG:seg	:	:	:	:	:

Description

Protein kinase superfamily protein

Coordinates

chr4:-:215379792..215381633

Molecular Weight (calculated)

44602.2 Da

IEP (calculated)

6.941

GRAVY (calculated)

-0.022

Length

417 amino acids

Sequence
(BLAST)

001: MDDFVVHHSF SPFPPRTNQQ LHYTAANAAT DHAMENAVVG LIVVAGTSVA VAALCLLLAF LCRRHSSKSR LKPCSRQRCC SAAAGSTLPV SVSDGMTPDY
101: LSWSFYSTTA EASLQKLSLA DLAAATGGFS PDNIIGDGSF GFVYRAVLPD GAAVAVKRLS GDCDAGAGNR EFRAELEVLG SLSHSNLARL LGYCADGRDR
201: ILVYELLERG SLDAWLHGGD ADDSGGTGTL PWPARLRVAR GAAAALEFLH HGRRPPVLHR DVKSSNVLLS EGFEAKLADF GLARIIRGSP AKSHVSTQAA
301: GTVGYVAPEI WDGVGATTMA DVYSFGVLLI EIVTGKRPSW PIKASIGDKE VNLVDWTREK IHAGQAWEIL DRRMGIQSQG TEMEEAKGLL EIARRCIDSA
401: AKNRPTMEDV VAMLNKV

Best Arabidopsis Sequence Match ( AT5G42440.1 )
(BLAST)

001: MDYQISLILA TSISSIFLLL IVFTVVMIVC RRRPPIQNHP RRNRNFPDPD PDLNTETVTE SFDPSICEIS MAELTIATKN FSSDLIVGDG SFGLVYRAQL
101: SNGVVVAVKK LDHDALQGFR EFAAEMDTLG RLNHPNIVRI LGYCISGSDR ILIYEFLEKS SLDYWLHETD EENSPLTWST RVNITRDVAK GLAYLHGLPK
201: PIIHRDIKSS NVLLDSDFVA HIADFGLARR IDASRSHVST QVAGTMGYMP PEYWEGNTAA TVKADVYSFG VLMLELATRR RPNLTVVVDE KEVGLAQWAV
301: IMVEQNRCYE MLDFGGVCGS EKGVEEYFRI ACLCIKESTR ERPTMVQVVE LLEELCRFM

Arabidopsis Description

At5g42440 [Source:UniProtKB/TrEMBL;Acc:Q9FIH3]
SUBAcon: [plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.