Factsheet for AT5G42440.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

endoplasmic reticulum 5
golgi 6
extracellular 5
vacuole 4
plasma membrane 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY14753	Canola	plasma membrane	70.75	69.78
CDY68216	Canola	plasma membrane	70.19	69.23
Bra016962.1-P	Field mustard	plasma membrane	69.92	68.96
VIT_18s0072g00170.t01	Wine grape	plasma membrane	58.5	57.69
KRG91688	Soybean	plasma membrane	54.04	52.29
KRH35107	Soybean	plasma membrane	52.65	51.36
Solyc04g071870.1.1	Tomato	plasma membrane	52.09	49.08
GSMUA_Achr10P...	Banana	plasma membrane	48.47	49.01
PGSC0003DMT400064560	Potato	plasma membrane	50.97	48.03
HORVU4Hr1G020000.1	Barley	plasma membrane	44.57	42.9
TraesCS4D01G109000.1	Wheat	plasma membrane	44.29	42.4
TraesCS4A01G207800.1	Wheat	plasma membrane	44.01	42.13
TraesCS4B01G111300.1	Wheat	plasma membrane	43.73	41.87
KRG94081	Soybean	plasma membrane	25.35	37.76
Os11t0168600-01	Rice	cytosol, plasma membrane	10.03	36.36
Zm00001d053133_P001	Maize	cytosol, peroxisome, plasma membrane	41.5	35.73
KXG27836	Sorghum	plastid	43.73	35.52
KRG94367	Soybean	plasma membrane	26.74	32.88

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.10.2	Gene3D:3.30.200.20	EntrezGene:834250	UniProt:A0A178UJJ3	ProteinID:AED94811.1
ArrayExpress:AT5G42440	EnsemblPlantsGene:AT5G42440	RefSeq:AT5G42440	TAIR:AT5G42440	RefSeq:AT5G42440-TAIR-G	EnsemblPlants:AT5G42440.1
TAIR:AT5G42440.1	ProteinID:BAB10485.1	EMBL:BT011003	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
RefSeq:NP_199059.1	ProteinID:OAO93437.1	PFAM:PF07714	PIRSF:PIRSF000654	PO:PO:0000013	PO:PO:0000037
PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0004507
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009005	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0020030
PO:PO:0020100	PO:PO:0025022	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27000
PANTHER:PTHR27000:SF48	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	UniProt:Q9FIH3	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0000048BF4	SEG:seg	:

Description

At5g42440 [Source:UniProtKB/TrEMBL;Acc:Q9FIH3]

Coordinates

chr5:-:16973202..16974877

Molecular Weight (calculated)

40481.8 Da

IEP (calculated)

5.032

GRAVY (calculated)

-0.013

Length

359 amino acids

Sequence
(BLAST)

001: MDYQISLILA TSISSIFLLL IVFTVVMIVC RRRPPIQNHP RRNRNFPDPD PDLNTETVTE SFDPSICEIS MAELTIATKN FSSDLIVGDG SFGLVYRAQL
101: SNGVVVAVKK LDHDALQGFR EFAAEMDTLG RLNHPNIVRI LGYCISGSDR ILIYEFLEKS SLDYWLHETD EENSPLTWST RVNITRDVAK GLAYLHGLPK
201: PIIHRDIKSS NVLLDSDFVA HIADFGLARR IDASRSHVST QVAGTMGYMP PEYWEGNTAA TVKADVYSFG VLMLELATRR RPNLTVVVDE KEVGLAQWAV
301: IMVEQNRCYE MLDFGGVCGS EKGVEEYFRI ACLCIKESTR ERPTMVQVVE LLEELCRFM

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.