CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH22291
KRH27037

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G42440.1	KRH22291	AT2G42580.1	19000166
AT5G42440.1	KRH27037	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG94081	Soybean	plasma membrane	48.29	58.51
KRH35107	Soybean	plasma membrane	61.64	48.91
KRG91688	Soybean	plasma membrane	54.79	43.13
VIT_18s0072g00170.t01	Wine grape	plasma membrane	36.64	29.4
CDY14753	Canola	plasma membrane	35.27	28.3
Bra016962.1-P	Field mustard	plasma membrane	34.25	27.47
CDY68216	Canola	plasma membrane	34.25	27.47
AT5G42440.1	Thale cress	golgi, plasma membrane	32.88	26.74
Solyc04g071870.1.1	Tomato	plasma membrane	34.59	26.51
PGSC0003DMT400064560	Potato	plasma membrane	34.25	26.25
GSMUA_Achr10P...	Banana	plasma membrane	30.48	25.07
HORVU4Hr1G020000.1	Barley	plasma membrane	30.48	23.86
TraesCS4B01G111300.1	Wheat	plasma membrane	30.14	23.47
TraesCS4A01G207800.1	Wheat	plasma membrane	29.11	22.67
TraesCS4D01G109000.1	Wheat	plasma membrane	29.11	22.67
Zm00001d053133_P001	Maize	cytosol, peroxisome, plasma membrane	28.77	20.14
KXG27836	Sorghum	plastid	28.42	18.78
Os11t0168600-01	Rice	cytosol, plasma membrane	3.42	10.1

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	UniProt:A0A0R0EJA0	EMBL:ACUP02011943	EnsemblPlantsGene:GLYMA_19G079500
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004675	GO:GO:0004713
GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016740	GO:GO:0018108	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	EnsemblPlants:KRG94367
ProteinID:KRG94367	ProteinID:KRG94367.1	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF32	InterPro:Prot_kinase_dom	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	TMHMM:TMhelix	UniParc:UPI0006EDEB4D
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr19:+:28783531..28784615

Molecular Weight (calculated)

32927.5 Da

IEP (calculated)

6.443

GRAVY (calculated)

-0.039

Length

292 amino acids

Sequence
(BLAST)

001: MEHALQAVVA SIGSFFVVTL LLAAAILLYQ HHPSSSLSAV DASWSSDPNL IKISWDKLAR ATDNFSLHLI VDDDNFGLVY KARLFSSTTV AVKKLSPGAF
101: QGFCEFTTEM ETLSRLRHPN IVKILSYWAS GPECLLVYEF IEKGNLDQWL HEPDLSLSLP PLPWPTRVNI ICGVAHGLSY LHDLDKEEEQ NVEALEEVIR
201: LGGGVVEPEG LHEDVVDDAL NINICGKLKS RIFKDGQKDK PVFVNSYNYD GLSQHVVVSI HIRFLRRLFN NHRRMQSLKL QYCHRVSFNN VS

Best Arabidopsis Sequence Match ( AT5G42440.1 )
(BLAST)

001: MDYQISLILA TSISSIFLLL IVFTVVMIVC RRRPPIQNHP RRNRNFPDPD PDLNTETVTE SFDPSICEIS MAELTIATKN FSSDLIVGDG SFGLVYRAQL
101: SNGVVVAVKK LDHDALQGFR EFAAEMDTLG RLNHPNIVRI LGYCISGSDR ILIYEFLEKS SLDYWLHETD EENSPLTWST RVNITRDVAK GLAYLHGLPK
201: PIIHRDIKSS NVLLDSDFVA HIADFGLARR IDASRSHVST QVAGTMGYMP PEYWEGNTAA TVKADVYSFG VLMLELATRR RPNLTVVVDE KEVGLAQWAV
301: IMVEQNRCYE MLDFGGVCGS EKGVEEYFRI ACLCIKESTR ERPTMVQVVE LLEELCRFM

Arabidopsis Description

At5g42440 [Source:UniProtKB/TrEMBL;Acc:Q9FIH3]
SUBAcon: [plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.