Factsheet for Solyc04g071870.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
plasma membrane 7
extracellular 4
endoplasmic reticulum 4
vacuole 4
golgi 4
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400064560	Potato	plasma membrane	93.7	93.7
VIT_18s0072g00170.t01	Wine grape	plasma membrane	56.43	59.07
AT5G42440.1	Thale cress	golgi, plasma membrane	49.08	52.09
KRG91688	Soybean	plasma membrane	50.66	52.02
KRH35107	Soybean	plasma membrane	49.87	51.63
CDY14753	Canola	plasma membrane	48.56	50.82
Bra016962.1-P	Field mustard	plasma membrane	48.03	50.27
CDY68216	Canola	plasma membrane	48.03	50.27
GSMUA_Achr10P...	Banana	plasma membrane	45.14	48.45
HORVU4Hr1G020000.1	Barley	plasma membrane	40.68	41.55
TraesCS4B01G111300.1	Wheat	plasma membrane	40.68	41.33
TraesCS4D01G109000.1	Wheat	plasma membrane	40.16	40.8
KRG94081	Soybean	plasma membrane	25.72	40.66
TraesCS4A01G207800.1	Wheat	plasma membrane	39.9	40.53
Zm00001d053133_P001	Maize	cytosol, peroxisome, plasma membrane	38.85	35.49
Os11t0168600-01	Rice	cytosol, plasma membrane	9.19	35.35
KRG94367	Soybean	plasma membrane	26.51	34.59
KXG27836	Sorghum	plastid	39.37	33.94

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.10.2	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	UniProt:K4BTH4	InterPro:Kinase-like_dom_sf
PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27000
PANTHER:PTHR27000:SF48	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:Solyc04g071870.1	EnsemblPlants:Solyc04g071870.1.1	TMHMM:TMhelix	UniParc:UPI0002766BFE	SEG:seg	:

Description

No Description!

Coordinates

chr4:+:58882740..58883885

Molecular Weight (calculated)

42777.5 Da

IEP (calculated)

6.320

GRAVY (calculated)

-0.155

Length

381 amino acids

Sequence
(BLAST)

001: MDPPLQAFIA AASSFVAVLL IFASLYIFCR NPIKRRPIEE ETRNHPRSRN RNIRAIASSN TDLSSITVTE SATFDPNLDQ LSMKQLADAT RNFSPELIIG
101: DGSFGMVYKA TLTCGKTVAV KKLSADAFQG FREYRAEMET LGNIKHKNIV KMLGYCSTGS DRVLIYEFIE KGSLDQWLYD TSSTSDMLEW MPLHWETRTK
201: IVKGVAEGLA YMHNLDTPII HRDIKASNIL LDANFNAYIA DFGLARRIQG SHLHVSTQVA GTMGYMPPEY INGAPMAKTN GDVYSFGVLM LEIVTGRRPN
301: FPFKGEDGCE IRLVNWISGM VEQERFMEMV DDNLSKDELK ESAVVEYFRI AMMCANENCH ARPPMKEVVK ILDGISTFIS S

Best Arabidopsis Sequence Match ( AT5G42440.1 )
(BLAST)

001: MDYQISLILA TSISSIFLLL IVFTVVMIVC RRRPPIQNHP RRNRNFPDPD PDLNTETVTE SFDPSICEIS MAELTIATKN FSSDLIVGDG SFGLVYRAQL
101: SNGVVVAVKK LDHDALQGFR EFAAEMDTLG RLNHPNIVRI LGYCISGSDR ILIYEFLEKS SLDYWLHETD EENSPLTWST RVNITRDVAK GLAYLHGLPK
201: PIIHRDIKSS NVLLDSDFVA HIADFGLARR IDASRSHVST QVAGTMGYMP PEYWEGNTAA TVKADVYSFG VLMLELATRR RPNLTVVVDE KEVGLAQWAV
301: IMVEQNRCYE MLDFGGVCGS EKGVEEYFRI ACLCIKESTR ERPTMVQVVE LLEELCRFM

Arabidopsis Description

At5g42440 [Source:UniProtKB/TrEMBL;Acc:Q9FIH3]
SUBAcon: [plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.