Factsheet for PGSC0003DMT400064560

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
plasma membrane 7
extracellular 4
endoplasmic reticulum 4
vacuole 4
golgi 4
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g071870.1.1	Tomato	plasma membrane	93.7	93.7
VIT_18s0072g00170.t01	Wine grape	plasma membrane	55.38	57.97
CDY14753	Canola	plasma membrane	48.82	51.1
AT5G42440.1	Thale cress	golgi, plasma membrane	48.03	50.97
KRH35107	Soybean	plasma membrane	49.08	50.82
KRG91688	Soybean	plasma membrane	49.34	50.67
Bra016962.1-P	Field mustard	plasma membrane	48.03	50.27
CDY68216	Canola	plasma membrane	48.03	50.27
GSMUA_Achr10P...	Banana	plasma membrane	45.41	48.73
HORVU4Hr1G020000.1	Barley	plasma membrane	40.68	41.55
TraesCS4B01G111300.1	Wheat	plasma membrane	40.16	40.8
KRG94081	Soybean	plasma membrane	25.72	40.66
TraesCS4A01G207800.1	Wheat	plasma membrane	39.63	40.27
TraesCS4D01G109000.1	Wheat	plasma membrane	39.63	40.27
Os11t0168600-01	Rice	cytosol, plasma membrane	9.19	35.35
Zm00001d053133_P001	Maize	cytosol, peroxisome, plasma membrane	38.58	35.25
KRG94367	Soybean	plasma membrane	26.25	34.25
KXG27836	Sorghum	plastid	39.11	33.71

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102587327	MapMan:18.4.1.10.2	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
UniProt:M1CCK4	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400025086	PGSC:PGSC0003DMG400025086	EnsemblPlants:PGSC0003DMT400064560	PIRSF:PIRSF000654
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27000	PANTHER:PTHR27000:SF48	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0002967E1E
RefSeq:XP_006359051.1	SEG:seg	:	:	:	:

Description

Receptor serine-threonine protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400025086]

Coordinates

chr4:+:61061509..61063813

Molecular Weight (calculated)

42732.6 Da

IEP (calculated)

5.944

GRAVY (calculated)

-0.121

Length

381 amino acids

Sequence
(BLAST)

001: MDPPLQAFIA AASSFVAVLL IFASLYFFCR DPIKRRQIEE ETRNHPRTRN RNIRAIASSN TELSSITVTE SATFDPNLDQ LSMKQLADAT RDFSPELIIG
101: DGSFGMVYKA TLTCGKTVAV KKLSADAFQG FREYRAEMET LGNIKHKNIV KMLGYCSTGC DRVLIYEFIE KGSLDQWLYD TSSTSDMLES MPWMPLNWET
201: RIKIVKGVAE GLAYMHNLVT AIIHRDIKAS NILLDANFDA YIADFGLARR IQGSHLHVST QVAGTMGYMP PEYINGAPMA KTNGDVYSFG VLMLEIVTGR
301: RPNFPFTGED GREIRLVNWI SGMVEQGRYM EMVDANLSKD ELKESAVVEY FRIAMMCANE NCHARPPMNE VVKILDGIST C

Best Arabidopsis Sequence Match ( AT5G42440.1 )
(BLAST)

001: MDYQISLILA TSISSIFLLL IVFTVVMIVC RRRPPIQNHP RRNRNFPDPD PDLNTETVTE SFDPSICEIS MAELTIATKN FSSDLIVGDG SFGLVYRAQL
101: SNGVVVAVKK LDHDALQGFR EFAAEMDTLG RLNHPNIVRI LGYCISGSDR ILIYEFLEKS SLDYWLHETD EENSPLTWST RVNITRDVAK GLAYLHGLPK
201: PIIHRDIKSS NVLLDSDFVA HIADFGLARR IDASRSHVST QVAGTMGYMP PEYWEGNTAA TVKADVYSFG VLMLELATRR RPNLTVVVDE KEVGLAQWAV
301: IMVEQNRCYE MLDFGGVCGS EKGVEEYFRI ACLCIKESTR ERPTMVQVVE LLEELCRFM

Arabidopsis Description

At5g42440 [Source:UniProtKB/TrEMBL;Acc:Q9FIH3]
SUBAcon: [plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.