CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 3
plasma membrane 7
extracellular 4
endoplasmic reticulum 4
vacuole 4
golgi 4
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH22291
KRH27037

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G42440.1	KRH22291	AT2G42580.1	19000166
AT5G42440.1	KRH27037	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG91688	Soybean	plasma membrane	85.05	84.37
KRG94081	Soybean	plasma membrane	45.92	70.12
KRG94367	Soybean	plasma membrane	48.91	61.64
VIT_18s0072g00170.t01	Wine grape	plasma membrane	57.61	58.24
CDY14753	Canola	plasma membrane	52.72	53.3
AT5G42440.1	Thale cress	golgi, plasma membrane	51.36	52.65
Bra016962.1-P	Field mustard	plasma membrane	51.63	52.2
CDY68216	Canola	plasma membrane	51.63	52.2
Solyc04g071870.1.1	Tomato	plasma membrane	51.63	49.87
PGSC0003DMT400064560	Potato	plasma membrane	50.82	49.08
GSMUA_Achr10P...	Banana	plasma membrane	44.29	45.92
HORVU4Hr1G020000.1	Barley	plasma membrane	44.02	43.43
TraesCS4B01G111300.1	Wheat	plasma membrane	44.02	43.2
TraesCS4D01G109000.1	Wheat	plasma membrane	43.21	42.4
TraesCS4A01G207800.1	Wheat	plasma membrane	42.93	42.13
Zm00001d053133_P001	Maize	cytosol, peroxisome, plasma membrane	40.76	35.97
KXG27836	Sorghum	plastid	40.22	33.48
Os11t0168600-01	Rice	cytosol, plasma membrane	8.42	31.31

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100802728	MapMan:18.4.1.10.2	Gene3D:3.30.200.20	EMBL:ACUP02006650	EnsemblPlantsGene:GLYMA_10G222600
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
UniProt:I1LDE2	InterPro:IPR000719	EnsemblPlants:KRH35107	ProteinID:KRH35107	ProteinID:KRH35107.1	InterPro:Kinase-like_dom_sf
PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27006
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix
UniParc:UPI000233C360	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:45378675..45380536

Molecular Weight (calculated)

41239.6 Da

IEP (calculated)

7.760

GRAVY (calculated)

-0.211

Length

368 amino acids

Sequence
(BLAST)

001: MEHALQAVVA SIASFFVVTL LLAAAILLCQ HHRNSTKTRA RSSHIRTRPA PHREASSSLS AVDASWSSDP NLIKISWDEL ARATDNFSPH LIVGDGSFGL
101: VYKARLSSGA TVAVKKLSPD AFQGFREFTA EMETLSRLRH PNIVKILSYW ASGPERLLVY EFIEKGNLDQ WLHEPDLSLS LSPLPWPTRV NIIRGVAHGL
201: SYLHGLDKPV IHRDIKASNI LLDSKFQAHI ADFGLARRID KTHSHVSTQF AGTIGYMPPE CIEGSNVANR EVDVYSFGIL MIETASSHRP NLPMKLGPDD
301: IGMVQWARKM KEKNAEIEMV DVNISRGEGL REETVKEYVR IACECTREMQ KERPQMPQVV QWLDSMPL

Best Arabidopsis Sequence Match ( AT5G42440.1 )
(BLAST)

001: MDYQISLILA TSISSIFLLL IVFTVVMIVC RRRPPIQNHP RRNRNFPDPD PDLNTETVTE SFDPSICEIS MAELTIATKN FSSDLIVGDG SFGLVYRAQL
101: SNGVVVAVKK LDHDALQGFR EFAAEMDTLG RLNHPNIVRI LGYCISGSDR ILIYEFLEKS SLDYWLHETD EENSPLTWST RVNITRDVAK GLAYLHGLPK
201: PIIHRDIKSS NVLLDSDFVA HIADFGLARR IDASRSHVST QVAGTMGYMP PEYWEGNTAA TVKADVYSFG VLMLELATRR RPNLTVVVDE KEVGLAQWAV
301: IMVEQNRCYE MLDFGGVCGS EKGVEEYFRI ACLCIKESTR ERPTMVQVVE LLEELCRFM

Arabidopsis Description

At5g42440 [Source:UniProtKB/TrEMBL;Acc:Q9FIH3]
SUBAcon: [plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.