Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 1
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH27037 | Soybean | nucleus | 94.18 | 81.48 |
| VIT_18s0001g09830.t01 | Wine grape | cytosol | 28.08 | 62.12 |
| VIT_12s0028g02240.t01 | Wine grape | cytosol | 66.27 | 54.51 |
| CDY61202 | Canola | cytosol | 57.02 | 49.63 |
| Bra000267.1-P | Field mustard | cytosol | 57.02 | 49.55 |
| KRH21985 | Soybean | cytosol | 58.56 | 49.42 |
| KRH26223 | Soybean | nucleus | 57.19 | 49.41 |
| AT2G42580.1 | Thale cress | cytosol | 58.22 | 49.2 |
| Zm00001d004494_P001 | Maize | cytosol, mitochondrion | 18.66 | 49.1 |
| CDY51514 | Canola | cytosol | 56.16 | 49.03 |
| KRH27330 | Soybean | cytosol | 58.39 | 48.85 |
| CDX71941 | Canola | cytosol | 56.34 | 48.81 |
| CDY42827 | Canola | cytosol | 55.99 | 48.73 |
| KRH55099 | Soybean | nucleus | 56.51 | 48.67 |
| CDY55390 | Canola | cytosol | 55.65 | 48.58 |
| CDY49237 | Canola | cytosol | 55.48 | 48.58 |
| GSMUA_Achr10P... | Banana | cytosol | 55.48 | 48.58 |
| Bra007405.1-P | Field mustard | cytosol | 55.82 | 48.44 |
| AT3G58620.1 | Thale cress | cytosol | 56.51 | 48.39 |
| Bra004709.1-P | Field mustard | cytosol | 53.94 | 47.95 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 41.1 | 47.71 |
| Os01t0218200-00 | Rice | plastid | 53.6 | 46.58 |
| Zm00001d008930_P003 | Maize | cytosol | 53.42 | 46.22 |
| Zm00001d039362_P002 | Maize | cytosol | 52.91 | 46.12 |
| EES02247 | Sorghum | plastid | 53.77 | 45.91 |
| TraesCS3B01G162100.1 | Wheat | cytosol | 52.57 | 45.68 |
| Os05t0210600-01 | Rice | cytosol | 31.34 | 45.64 |
| TraesCS3A01G143000.1 | Wheat | cytosol | 52.23 | 45.39 |
| TraesCS3D01G144600.1 | Wheat | cytosol | 52.23 | 45.19 |
| HORVU1Hr1G093390.2 | Barley | cytosol | 52.05 | 45.17 |
| GSMUA_Achr7P24480_001 | Banana | cytosol | 50.17 | 45.15 |
| HORVU3Hr1G027650.2 | Barley | mitochondrion | 51.2 | 44.89 |
| GSMUA_Achr4P08560_001 | Banana | cytosol | 52.57 | 44.82 |
| EES01073 | Sorghum | cytosol | 52.05 | 44.64 |
| TraesCS1D01G437100.1 | Wheat | nucleus | 53.25 | 44.56 |
| TraesCS1B01G462300.1 | Wheat | cytosol | 52.74 | 44.38 |
| TraesCS1A01G427400.1 | Wheat | cytosol | 52.91 | 44.33 |
| Zm00001d044479_P001 | Maize | cytosol | 51.54 | 44.2 |
| TraesCS3A01G221800.1 | Wheat | cytosol | 52.05 | 44.19 |
| TraesCS3D01G231300.1 | Wheat | cytosol, mitochondrion | 51.71 | 43.9 |
| TraesCS3B01G251600.1 | Wheat | cytosol, mitochondrion | 51.71 | 43.9 |
| GSMUA_Achr3P25160_001 | Banana | cytosol | 53.08 | 43.54 |
| HORVU3Hr1G054240.2 | Barley | cytosol, mitochondrion | 50.68 | 43.02 |
| OQU78515 | Sorghum | cytosol | 51.54 | 43.0 |
| Os05t0587300-01 | Rice | cytosol | 40.24 | 42.34 |
| Zm00001d011352_P001 | Maize | cytosol | 49.14 | 42.14 |
| KRH15375 | Soybean | cytosol | 14.73 | 34.4 |
| KRH08675 | Soybean | cytosol, mitochondrion, plastid | 19.69 | 34.23 |
| KRH59356 | Soybean | plastid | 24.66 | 33.57 |
| GSMUA_AchrUn_... | Banana | cytosol | 14.55 | 31.72 |
| KRH62368 | Soybean | cytosol | 34.93 | 31.19 |
| KRG97591 | Soybean | plastid | 29.11 | 31.02 |
| KRH31282 | Soybean | plastid | 30.65 | 30.76 |
| KRH43206 | Soybean | cytosol, plastid | 28.25 | 30.11 |
| KRH53085 | Soybean | cytosol | 35.96 | 30.09 |
| KRH18895 | Soybean | cytosol | 35.27 | 29.3 |
| KRH16702 | Soybean | nucleus | 34.76 | 29.25 |
| Zm00001d009724_P009 | Maize | cytosol | 48.63 | 26.57 |
| KRH23391 | Soybean | cytosol | 6.51 | 21.23 |
| KRG99844 | Soybean | cytosol | 8.56 | 18.66 |
| KRH46794 | Soybean | cytosol | 7.71 | 16.3 |
| KRH09945 | Soybean | cytosol, endoplasmic reticulum | 1.54 | 15.52 |
| Zm00001d006366_P001 | Maize | cytosol | 0.34 | 0.86 |
| Zm00001d033961_P001 | Maize | cytosol | 0.34 | 0.86 |
Protein Annotations
| Gene3D:1.25.40.10 | EntrezGene:100792373 | MapMan:11.3.2.5 | Gene3D:3.40.30.10 | EMBL:ACUP02008404 | EnsemblPlantsGene:GLYMA_13G291200 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0019725 | GO:GO:0045454 | UniProt:I1M3M3 | InterPro:IPR011990 | InterPro:IPR013026 |
| InterPro:IPR013766 | InterPro:IPR019734 | EnsemblPlants:KRH22291 | ProteinID:KRH22291 | ProteinID:KRH22291.1 | PFAM:PF00085 |
| PFAM:PF13432 | PFscan:PS50005 | PFscan:PS50293 | PANTHER:PTHR22904 | PANTHER:PTHR22904:SF374 | SMART:SM00028 |
| SUPFAM:SSF48452 | SUPFAM:SSF52833 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | InterPro:Thioredoxin-like_sf |
| InterPro:Thioredoxin_domain | UniParc:UPI000233BD6C | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr13:-:39136442..39139729
Molecular Weight (calculated)
63919.6 Da
IEP (calculated)
8.898
GRAVY (calculated)
-0.283
Length
584 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNTLQQQSP ESKRLDLGSN ARRPCHRRSV SAGAPLIYSG GATLLPSGNI CPSGKILKPG LPSRGPNRTD VLGSGTVNYG RGSIVRGGSG NIPVPAAAPP
101: LTVKRAMSGS DPEEVKRAGN ELYRGGNFVE ALAMYDRAVA ISPGNAACRS NRAAALTALG RLAEAARECL EAVKLNPAYA RAHKRLASLY LRFGQVENSR
201: RHLCLSGNQE DQSEEQKLVL LEKHLNRCAD ARKFGDWKRV LRESEAAIAV GADFSPQIVA CKVEAYLKLH QLEDADSSLL NVPKLEGCPP ACSQTKFFGM
301: VGEAYVPFVC AQVEMALGRF ENAVAAAEKA SMLDYGNVEV GRIVNVVKMV ARARSRGNEL FSSGMFSEAC SAYGEGLKYD NSNHVLYCNR AICWSKLGLW
401: EQSVQDCSQA LNIQPNYTKA LFRRAASNTK LERWSEVVKD YQALKRELPN DNEVAESLRQ AQLALEKSRQ MVYGTRFGVE VEQICSLDKF KAALASAGIS
501: VVYFKEASNE LCEELSPFIN TLCVRYPSVK FIKVDVEECL AIAKAESIRS VPTFKIYKNG EKVKDMIRPT HQLLEDSVRK SSSL
101: LTVKRAMSGS DPEEVKRAGN ELYRGGNFVE ALAMYDRAVA ISPGNAACRS NRAAALTALG RLAEAARECL EAVKLNPAYA RAHKRLASLY LRFGQVENSR
201: RHLCLSGNQE DQSEEQKLVL LEKHLNRCAD ARKFGDWKRV LRESEAAIAV GADFSPQIVA CKVEAYLKLH QLEDADSSLL NVPKLEGCPP ACSQTKFFGM
301: VGEAYVPFVC AQVEMALGRF ENAVAAAEKA SMLDYGNVEV GRIVNVVKMV ARARSRGNEL FSSGMFSEAC SAYGEGLKYD NSNHVLYCNR AICWSKLGLW
401: EQSVQDCSQA LNIQPNYTKA LFRRAASNTK LERWSEVVKD YQALKRELPN DNEVAESLRQ AQLALEKSRQ MVYGTRFGVE VEQICSLDKF KAALASAGIS
501: VVYFKEASNE LCEELSPFIN TLCVRYPSVK FIKVDVEECL AIAKAESIRS VPTFKIYKNG EKVKDMIRPT HQLLEDSVRK SSSL
001: MSHSRRLSLE PAIDSITGRF RDLQRNDDDV NKPDFRELDL GSPVSTLMPR GSASSSAAAT PTSSSGSSGS ASGKPSVSSQ MAKRLDDAYK SHSGELSSPG
101: SGMPTTTRIL KPGHRRSSST GTPLIFSGSS FTSATSHTSP QGGGSGATSA VSPNTGVLPA GNICPSGRIL KTGMASRTSS RTETLCTGTG NYGHGNVVRS
201: GGGGGTSGKA VRVAENGENP EELKRMGNDM YRRGSFSEAL SLYDRAILIS PGNAAYRSNR AAALTALRRL GEAVKECLEA VRIDPSYSRA HQRLASLYLR
301: LGEAENARRH ICFSGQCPDQ ADLQRLQTLE KHLRRCWEAR KIGDWKTAIK ETDAAIANGA DSSPQLVACK AEAFLRLKQI EDSDFCVSCI PRLDHHYHSQ
401: PQVKLFGMVV EAYVLCIQAQ VDMALGRFEN AVVKAERAAM LDQTNPEVVS VLNNVKMVVR ARTRGNELFS SGRFSEACVA YGDGLKQDDS NSVLYCNRAA
501: CWYKLGLWEK SVEDCNHALK SQPSYIKALL RRAASYGKLG RWEDAVKDYE FLRRELPGDS EVAESLERAK TVLMNRSQES KSLGFNNEVE AVSTLDKFKK
601: SVALPGVSVF HFKSSSNRQC EEISPFINTL CLRYPLVHFF MVDVEESMAL AKAESIRKVP TFKMYKNGDK VKEMVCPSHQ FLEDSIKHFL L
101: SGMPTTTRIL KPGHRRSSST GTPLIFSGSS FTSATSHTSP QGGGSGATSA VSPNTGVLPA GNICPSGRIL KTGMASRTSS RTETLCTGTG NYGHGNVVRS
201: GGGGGTSGKA VRVAENGENP EELKRMGNDM YRRGSFSEAL SLYDRAILIS PGNAAYRSNR AAALTALRRL GEAVKECLEA VRIDPSYSRA HQRLASLYLR
301: LGEAENARRH ICFSGQCPDQ ADLQRLQTLE KHLRRCWEAR KIGDWKTAIK ETDAAIANGA DSSPQLVACK AEAFLRLKQI EDSDFCVSCI PRLDHHYHSQ
401: PQVKLFGMVV EAYVLCIQAQ VDMALGRFEN AVVKAERAAM LDQTNPEVVS VLNNVKMVVR ARTRGNELFS SGRFSEACVA YGDGLKQDDS NSVLYCNRAA
501: CWYKLGLWEK SVEDCNHALK SQPSYIKALL RRAASYGKLG RWEDAVKDYE FLRRELPGDS EVAESLERAK TVLMNRSQES KSLGFNNEVE AVSTLDKFKK
601: SVALPGVSVF HFKSSSNRQC EEISPFINTL CLRYPLVHFF MVDVEESMAL AKAESIRKVP TFKMYKNGDK VKEMVCPSHQ FLEDSIKHFL L
Arabidopsis Description
TTL3Inactive TPR repeat-containing thioredoxin TTL3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIN1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.