Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G26650.1 | KRH22291 | AT2G42580.1 | 19000166 |
| AT1G26650.1 | KRH27037 | AT2G42580.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH50552 | Soybean | plasma membrane | 95.57 | 96.64 |
| VIT_01s0113g00470.t01 | Wine grape | plasma membrane | 64.54 | 67.15 |
| Bra004384.1-P | Field mustard | extracellular, plasma membrane, vacuole | 57.34 | 65.3 |
| CDX95932 | Canola | extracellular, plasma membrane, vacuole | 57.34 | 65.3 |
| CDY40929 | Canola | extracellular, plasma membrane, vacuole | 56.79 | 64.67 |
| AT1G26650.1 | Thale cress | plasma membrane | 59.0 | 63.58 |
| AT1G69430.1 | Thale cress | plastid | 60.11 | 62.0 |
| Bra024700.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 57.34 | 61.61 |
| CDX85037 | Canola | plasma membrane | 57.34 | 61.61 |
| CDY16174 | Canola | plasma membrane | 57.34 | 61.61 |
| Solyc05g012870.1.1 | Tomato | cytosol, nucleus, plasma membrane | 59.83 | 60.85 |
| PGSC0003DMT400072841 | Potato | cytosol, nucleus, plasma membrane | 59.56 | 60.06 |
| PGSC0003DMT400068981 | Potato | nucleus, peroxisome, plasma membrane | 59.83 | 59.5 |
| Solyc01g010990.2.1 | Tomato | peroxisome | 59.28 | 58.95 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane, vacuole | 40.44 | 53.68 |
| Os07t0595900-01 | Rice | endoplasmic reticulum, plasma membrane | 41.0 | 48.37 |
| EER97483 | Sorghum | cytosol, extracellular, plasma membrane | 44.04 | 48.04 |
| Zm00001d022037_P001 | Maize | plasma membrane | 43.49 | 47.43 |
| TraesCS2A01G183300.1 | Wheat | plasma membrane | 42.38 | 46.22 |
| TraesCS2B01G209900.1 | Wheat | plasma membrane | 42.38 | 46.22 |
| TraesCS2D01G191100.1 | Wheat | plasma membrane | 42.38 | 46.22 |
| KRH03520 | Soybean | plastid | 21.88 | 24.38 |
| KRH56883 | Soybean | plasma membrane | 22.99 | 23.25 |
| KRH54594 | Soybean | extracellular, mitochondrion, plasma membrane, plastid | 20.22 | 22.26 |
| KRH63289 | Soybean | extracellular, mitochondrion, plasma membrane, plastid | 19.94 | 21.95 |
Protein Annotations
| EMBL:ACUP02012216 | EnsemblPlants:KRG89547 | EnsemblPlantsGene:GLYMA_20G030800 | EntrezGene:100789016 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | PANTHER:PTHR33133 | PANTHER:PTHR33133:SF1 | ProteinID:KRG89547 | ProteinID:KRG89547.1 | TMHMM:TMhelix |
| UniParc:UPI00023DD35C | UniProt:K7N140 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr20:+:3753995..3756930
Molecular Weight (calculated)
39995.8 Da
IEP (calculated)
7.712
GRAVY (calculated)
0.693
Length
361 amino acids
Sequence
(BLAST)
(BLAST)
001: MNTQMEISSG GCSPRIRSEY SRKEGSEGTP FQHMELSDRD RNFQVQSMNA LEILRETVRI LRFNSWGFMA IAFMLICPVS AVLLSNVIVD ESIVKNLSIR
101: LMLVAQTSGL PLRPIIKQSC QRFAETVVSS AMCFPFYATL LLLSKAAVVY SVDCTYSRKK FDASKFCVIV AKFWRKILFT YMWVCTVIVC CITLFCVFLV
201: AFCSALAVLG FLPDVVVYCA MLVGLVFSVV FANAIIICNI AMVISVLEDV SGAQAMLRSS ILIKGQTQVG LLIFLGSTIG MAFVEGLFEH RVKTLSYGDG
301: SSRVWEGPLL VVMYSFVVLI DSMMSAVFYF SCRSSNMEIS DVEGKSILET MAISAESMGI Q
101: LMLVAQTSGL PLRPIIKQSC QRFAETVVSS AMCFPFYATL LLLSKAAVVY SVDCTYSRKK FDASKFCVIV AKFWRKILFT YMWVCTVIVC CITLFCVFLV
201: AFCSALAVLG FLPDVVVYCA MLVGLVFSVV FANAIIICNI AMVISVLEDV SGAQAMLRSS ILIKGQTQVG LLIFLGSTIG MAFVEGLFEH RVKTLSYGDG
301: SSRVWEGPLL VVMYSFVVLI DSMMSAVFYF SCRSSNMEIS DVEGKSILET MAISAESMGI Q
001: MEMGLSGMMN HGGSNSKLRK FEIESSSSSP SSSSDHKFHS MNALEILRET VRILRYNLGA FMLIALLLIC PVSAILLPNL LVDQSVVNSL TVRLLLVSKS
101: SGLPLLPFVR NSCQKFSETA VSSAMCFPLF ITLSLLSRAA VVYSVDCTYS RKKVVVTKFV VIMQRLWKRL VITYLWICTV IVVCLTSFCV FLVAVCSSFY
201: VLGFSPDFNA YGAILVGLVF SVVFANAIII CNTTIVISIL EDVSGPGALV RASDLIKGQT QVGLLIFLGS TIGLTFVEGL FEHRVKSLSY GDGSSRLWEG
301: PLLVVMYSFV VLIDTMMSAV FYFSCRSYSM EAVEALEASG EIVSQDLSLL
101: SGLPLLPFVR NSCQKFSETA VSSAMCFPLF ITLSLLSRAA VVYSVDCTYS RKKVVVTKFV VIMQRLWKRL VITYLWICTV IVVCLTSFCV FLVAVCSSFY
201: VLGFSPDFNA YGAILVGLVF SVVFANAIII CNTTIVISIL EDVSGPGALV RASDLIKGQT QVGLLIFLGS TIGLTFVEGL FEHRVKSLSY GDGSSRLWEG
301: PLLVVMYSFV VLIDTMMSAV FYFSCRSYSM EAVEALEASG EIVSQDLSLL
Arabidopsis Description
Son of sevenless protein [Source:UniProtKB/TrEMBL;Acc:Q9C794]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.