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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:
  • plastid 3
  • extracellular 3
  • endoplasmic reticulum 2
  • vacuole 3
  • plasma membrane 3
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane, vacuole
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:plastid
MultiLoc:extracellular
Plant-mPloc:plastid
Predotar:secretory
PProwler:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX95932 Canola extracellular, plasma membrane, vacuole 100.0 100.0
CDY40929 Canola extracellular, plasma membrane, vacuole 98.74 98.74
AT1G69430.1 Thale cress plastid 87.38 79.14
Bra024700.1-P Field mustard cytosol, peroxisome, plasma membrane 70.98 66.96
VIT_01s0113g00470.t01 Wine grape plasma membrane 65.93 60.23
KRH50552 Soybean plasma membrane 64.98 57.7
KRG89547 Soybean plasma membrane 65.3 57.34
Solyc05g012870.1.1 Tomato cytosol, nucleus, plasma membrane 62.46 55.77
PGSC0003DMT400072841 Potato cytosol, nucleus, plasma membrane 62.78 55.59
PGSC0003DMT400068981 Potato nucleus, peroxisome, plasma membrane 61.83 53.99
Solyc01g010990.2.1 Tomato peroxisome 61.2 53.44
Os07t0595900-01 Rice endoplasmic reticulum, plasma membrane 46.37 48.04
EER97483 Sorghum cytosol, extracellular, plasma membrane 49.53 47.43
TraesCS2A01G183300.1 Wheat plasma membrane 48.9 46.83
TraesCS2B01G209900.1 Wheat plasma membrane 48.9 46.83
TraesCS2D01G191100.1 Wheat plasma membrane 48.9 46.83
GSMUA_Achr10P... Banana extracellular, plasma membrane, vacuole 40.06 46.69
Zm00001d022037_P001 Maize plasma membrane 48.58 46.53
Bra035935.1-P Field mustard extracellular, peroxisome, plasma membrane, plastid 23.34 23.2
Bra012967.1-P Field mustard extracellular, mitochondrion, peroxisome, plasma membrane 23.03 22.53
Protein Annotations
EnsemblPlants:Bra004384.1EnsemblPlants:Bra004384.1-PEnsemblPlantsGene:Bra004384GO:GO:0005575GO:GO:0016020GO:GO:0016021
PANTHER:PTHR33133PANTHER:PTHR33133:SF1SEG:segTMHMM:TMhelixUniParc:UPI0002541893UniProt:M4CJK0
MapMan:35.2:::::
Description
AT1G69430 (E=1e-136) | unknown protein
Coordinates
chrA07:-:18355753..18356706
Molecular Weight (calculated)
34801.6 Da
IEP (calculated)
8.069
GRAVY (calculated)
0.948
Length
317 amino acids
Sequence
(BLAST)
001: MNALEILRET VRILRYNLAA FTLTLLLLIC PVSAILLPNL LVDQSVVNSL TIRLLLLAKS SGLPLLPFVR NSCQKFSETA VSSAACFPLF VTLSLLSRAA
101: VVYSVDCTYS RRKVVATKFV VIMQRLWKRL VFTYLWVCVV IVVCLTSFCV FLVAVCSSFF VLGFSPDFNA YGAILIGLGF SVVFANVIII CNTTIVISIL
201: EDVSGPRALV RANDLIKGQT QVGLLIFLGS TIGLTFVEGL FEHRVKILSY GDGSSRIWEG PLLVVMYSFV VLIDTMMSAV FYFSCRSYSM EAVEALEASG
301: GGTQPIMEMV SQDLSLL
Best Arabidopsis Sequence Match ( AT1G69430.1 )
(BLAST)
001: MEMGLSGMMN HGGSNSKLRK FEIESSSSSP SSSSDHKFHS MNALEILRET VRILRYNLGA FMLIALLLIC PVSAILLPNL LVDQSVVNSL TVRLLLVSKS
101: SGLPLLPFVR NSCQKFSETA VSSAMCFPLF ITLSLLSRAA VVYSVDCTYS RKKVVVTKFV VIMQRLWKRL VITYLWICTV IVVCLTSFCV FLVAVCSSFY
201: VLGFSPDFNA YGAILVGLVF SVVFANAIII CNTTIVISIL EDVSGPGALV RASDLIKGQT QVGLLIFLGS TIGLTFVEGL FEHRVKSLSY GDGSSRLWEG
301: PLLVVMYSFV VLIDTMMSAV FYFSCRSYSM EAVEALEASG EIVSQDLSLL
Arabidopsis Description
Son of sevenless protein [Source:UniProtKB/TrEMBL;Acc:Q9C794]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.