Factsheet for Bra035935.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, extracellular, plasma membrane

Predictor Summary:

plastid 2
extracellular 2
plasma membrane 3
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, peroxisome, plasma membrane, plastid
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16815	Canola	extracellular, peroxisome, plasma membrane, plastid	98.75	98.75
Bra012967.1-P	Field mustard	extracellular, mitochondrion, peroxisome, plasma membrane	82.13	80.86
AT5G61340.2	Thale cress	cytosol, peroxisome, plasma membrane	81.5	72.42
KRH63289	Soybean	extracellular, mitochondrion, plasma membrane, plastid	48.28	46.95
VIT_17s0000g06630.t01	Wine grape	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	47.34	46.32
KRH03520	Soybean	plastid	46.4	45.68
KRH54594	Soybean	extracellular, mitochondrion, plasma membrane, plastid	46.71	45.43
KRH56883	Soybean	plasma membrane	46.08	41.18
PGSC0003DMT400063407	Potato	vacuole	40.75	38.81
Solyc03g115690.1.1	Tomato	plasma membrane	39.5	37.95
Solyc06g069680.1.1	Tomato	plasma membrane	39.5	37.72
GSMUA_Achr9P09480_001	Banana	mitochondrion, plasma membrane	36.36	36.71
GSMUA_Achr6P24000_001	Banana	mitochondrion	35.74	36.42
GSMUA_Achr9P26820_001	Banana	plasma membrane	36.68	36.11
TraesCS5D01G116000.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	35.11	35.67
TraesCS5A01G105000.1	Wheat	plasma membrane	35.11	35.56
VIT_14s0108g01250.t01	Wine grape	plasma membrane	36.05	35.49
TraesCS5B01G108400.1	Wheat	mitochondrion, plastid	34.8	35.35
TraesCS5A01G075600.1	Wheat	mitochondrion	36.68	34.51
HORVU5Hr1G028310.1	Barley	plastid	34.8	33.84
TraesCS5B01G081900.1	Wheat	mitochondrion	35.74	33.63
TraesCS5D01G089200.1	Wheat	mitochondrion	35.74	33.53
GSMUA_Achr1P24470_001	Banana	endoplasmic reticulum, plasma membrane	31.03	33.45
EES16218	Sorghum	mitochondrion	35.74	33.43
Zm00001d041518_P001	Maize	mitochondrion	35.74	33.43
Zm00001d030775_P001	Maize	mitochondrion, plastid	34.48	32.35
Os12t0577200-01	Rice	mitochondrion, plastid	34.17	31.05
Os12t0507400-00	Rice	mitochondrion	31.66	30.79
KXG23542	Sorghum	mitochondrion, plastid	32.92	30.26
Zm00001d035322_P001	Maize	mitochondrion	32.29	29.77
Bra004384.1-P	Field mustard	extracellular, plasma membrane, vacuole	23.2	23.34
Bra024700.1-P	Field mustard	cytosol, peroxisome, plasma membrane	23.2	22.02
GSMUA_Achr3P18800_001	Banana	plastid	19.75	21.14

Protein Annotations

EnsemblPlants:Bra035935.1	EnsemblPlants:Bra035935.1-P	EnsemblPlantsGene:Bra035935	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR33133	PANTHER:PTHR33133:SF3	SEG:seg	TMHMM:TMhelix	UniParc:UPI000254201A	UniProt:M4F4D5
MapMan:35.2	:	:	:	:	:

Description

AT5G61340 (E=1e-104) | unknown protein

Coordinates

chrA09:-:2840093..2841052

Molecular Weight (calculated)

35470.1 Da

IEP (calculated)

9.375

GRAVY (calculated)

0.434

Length

319 amino acids

Sequence
(BLAST)

001: MKKTMEDPSK IMRRSVHTFL QHYHRATTAA AVALPFSTAL LLSQPFFSSS SSSIHMKLNT LLRGAGFSSS LEFFNILSLK LSQTLSSSLF TLPFSLTFLL
101: FSKAYIIKLL SNNHDSIYYF RLLRTYICNS FFILSANASA FALFFLASTI LDSFGFSSRN FYILFSLSSA IIYSIILANA FVISNLALVS SPSSSSGGYT
201: TLLKACLLLR GRTSTALALA LPTNLGLAGV EALFRYRVMR SFYKGDRDVT SIAIEGTLIA YLYALFLVLD TVVNFFFYQS CVENEEEQKI GGDDEYSIKI
301: QICESENTKI CIKGPKSLF

Best Arabidopsis Sequence Match ( AT5G61340.1 )
(BLAST)

001: MKKTMEDPSK IMRRSIHTFL QNYHRVTTAA AVALPFSAGL LLSQPFFSSS SSTLHMRLNM LFRGAGFSSS HDFFNILSLK LSQTLSSSLF TLPFSLTFLL
101: LSKAYVIKLL SNNHSADSSS VFYLRLLKTY VCNFFFLLSA NASAFALFFL AYNTLEAFGF SSRNFYTFLS LSSAIIYSII IANAFVISNL ALVSSPSSSS
201: GGYTNILKAC LLIRGRNSTA MALALPTNLG LAGVEALFQY RVMRSYYNGD RDIISIALEG TFIAYLYALF LVLDTIVNFL FYQSCIKNEE DQNIGREDEY
301: SIKIQISETE NTKIHIKGSK NLQEIL

Arabidopsis Description

Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q9FLJ9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.